Personal tools

Coexpression cluster:C1765: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 4: Line 4:
|gostat_on_coexpression_clusters=GO:0048010!vascular endothelial growth factor receptor signaling pathway!0.0435920646625478!2324$GO:0030165!PDZ domain binding!0.0435920646625478!83878$GO:0005021!vascular endothelial growth factor receptor activity!0.0435920646625478!2324$GO:0006471!protein amino acid ADP-ribosylation!0.0435920646625478!9630$GO:0005834!heterotrimeric G-protein complex!0.0496118168482225!9630
|gostat_on_coexpression_clusters=GO:0048010!vascular endothelial growth factor receptor signaling pathway!0.0435920646625478!2324$GO:0030165!PDZ domain binding!0.0435920646625478!83878$GO:0005021!vascular endothelial growth factor receptor activity!0.0435920646625478!2324$GO:0006471!protein amino acid ADP-ribosylation!0.0435920646625478!9630$GO:0005834!heterotrimeric G-protein complex!0.0496118168482225!9630
|id=C1765
|id=C1765
|ontology_enrichment_celltype=CL:0000115!5.27e-17!35;CL:0002139!1.34e-16!24;CL:0002078!1.52e-14!44;CL:0000071!5.13e-12!18;CL:0002546!5.13e-12!18;CL:0000213!3.64e-10!57;CL:0000215!3.64e-10!57
|ontology_enrichment_celltype=CL:0000115!3.50e-25!36;CL:0002139!3.25e-24!24;CL:0002078!4.50e-18!45;CL:0000071!1.83e-16!18;CL:0002546!1.83e-16!18;CL:0000213!1.03e-12!58;CL:0000215!1.03e-12!58;CL:0005020!1.41e-09!6;CL:0002138!1.41e-09!6;CL:0005022!1.41e-09!6;CL:0002543!1.14e-08!6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0007023!1.17e-42!115;UBERON:0004111!1.73e-16!241;UBERON:0000025!6.58e-15!194;UBERON:0001049!7.82e-15!57;UBERON:0005068!7.82e-15!57;UBERON:0006241!7.82e-15!57;UBERON:0007135!7.82e-15!57;UBERON:0000477!1.05e-13!286;UBERON:0001017!2.15e-13!82;UBERON:0003080!6.70e-13!42;UBERON:0005743!1.38e-12!86;UBERON:0002346!1.46e-12!90;UBERON:0002780!2.67e-12!41;UBERON:0001890!2.67e-12!41;UBERON:0006240!2.67e-12!41;UBERON:0001986!5.13e-12!18;UBERON:0004638!5.13e-12!18;UBERON:0004852!5.13e-12!18;UBERON:0000955!5.71e-12!69;UBERON:0006238!5.71e-12!69;UBERON:0002616!6.05e-12!59;UBERON:0003075!1.30e-11!86;UBERON:0007284!1.30e-11!86;UBERON:0000073!7.27e-11!94;UBERON:0001016!7.27e-11!94;UBERON:0002020!1.75e-10!34;UBERON:0003528!1.75e-10!34;UBERON:0001893!1.88e-10!34;UBERON:0002791!3.75e-10!33;UBERON:0001869!9.85e-10!32;UBERON:0000487!2.86e-09!22;UBERON:0002619!2.88e-09!22;UBERON:0006914!3.24e-09!25;UBERON:0000119!9.94e-09!312;UBERON:0000483!2.00e-08!309;UBERON:0001950!2.03e-08!20;UBERON:0000956!9.28e-08!25;UBERON:0000203!9.28e-08!25;UBERON:0003056!1.55e-07!61
|ontology_enrichment_uberon=UBERON:0007023!4.14e-56!114;UBERON:0004111!8.33e-23!240;UBERON:0000477!7.12e-21!373;UBERON:0000025!1.00e-19!192;UBERON:0001049!5.61e-18!56;UBERON:0005068!5.61e-18!56;UBERON:0006241!5.61e-18!56;UBERON:0007135!5.61e-18!56;UBERON:0004638!1.83e-16!18;UBERON:0001986!1.83e-16!18;UBERON:0004852!1.83e-16!18;UBERON:0000073!7.37e-16!53;UBERON:0002616!7.37e-16!53;UBERON:0002780!9.05e-15!41;UBERON:0001890!9.05e-15!41;UBERON:0003080!9.05e-15!41;UBERON:0006240!9.05e-15!41;UBERON:0003528!4.01e-14!34;UBERON:0002020!4.01e-14!34;UBERON:0001893!5.42e-14!34;UBERON:0001017!1.44e-13!81;UBERON:0001869!1.01e-12!32;UBERON:0002791!1.06e-12!32;UBERON:0003075!1.47e-12!82;UBERON:0007284!1.47e-12!82;UBERON:0000487!1.65e-12!22;UBERON:0002346!1.87e-11!86;UBERON:0000468!3.42e-11!656;UBERON:0002619!3.90e-11!22;UBERON:0001016!4.39e-11!89;UBERON:0011216!5.00e-11!223;UBERON:0001950!6.26e-11!20;UBERON:0000955!9.61e-11!68;UBERON:0006238!9.61e-11!68;UBERON:0010314!1.00e-10!132;UBERON:0006914!2.11e-10!25;UBERON:0000119!1.01e-09!309;UBERON:0000483!1.29e-09!306;UBERON:0000055!2.46e-09!68;UBERON:0000956!2.69e-09!25;UBERON:0000203!2.69e-09!25;UBERON:0000467!8.46e-09!624;UBERON:0000480!1.01e-08!625;UBERON:0002465!1.01e-08!10;UBERON:0010371!2.77e-08!104;UBERON:0003056!2.89e-08!61;UBERON:0000922!1.08e-07!592;UBERON:0004872!1.67e-07!83;UBERON:0000481!1.80e-07!342;UBERON:0001638!2.59e-07!9;UBERON:0003920!2.59e-07!9;UBERON:0004582!2.59e-07!9;UBERON:0002049!4.46e-07!78;UBERON:0007798!4.46e-07!78;UBERON:0001473!7.83e-07!8;UBERON:0004536!7.83e-07!8;UBERON:0006558!7.83e-07!8;UBERON:0001009!1.00e-06!112
|tfbs_overrepresentation=0.23317,0.0958562,0.62127,0.078254,0.310241,0.43203,0.0706464,0.5903,0.0539364,0.0424746,0.221396,0.346629,0.294377,0.201017,0.235304,0.101024,0.223746,0.158251,0.0865245,0.173528,0.29418,0.211047,0.13286,0.153106,0.0683222,0.332688,0.324018,0.146582,0.227906,0.150721,0.31768,0.182756,0.0298713,0.322378,0.108398,0.136785,0.132604,0.070583,0.192426,0.108683,0.155571,0.0406818,0.222325,0.287476,0.193292,0.0596699,0.0625547,0.28382,0.178503,0.193726,0.243359,0.0886583,0.114185,0.150136,0.308837,0.0632035,0.172598,0.328738,0.127101,0.169687,0.0485674,0.236408,0.174369,0.123348,0.0892839,0.0827236,0.164127,0.0980005,0.139298,0.262613,0.547889,0.110232,0.143944,0.190944,0.012429,0.0283664,0.155593,0.0717582,0.0613084,0.0120583,0.154245,0.348799,0.0698251,0.183986,0.436695,0.38341,0.104918,0.323505,0.46357,0.102375,0.138802,0.0812726,0.153861,0.0777027,0.138224,0.184264,0.769004,0.242703,0.149747,0.413729,0.0939617,0.416542,0.225088,0.0610111,0.337778,0.0672793,0.109136,0.497282,0.228612,0.407248,0.285407,0.0560173,0.23661,0.0293017,0.162943,0.0556189,0.0336673,0.0926302,0.220791,0.13579,0.262107,0.331577,0.222452,0.138843,0.164723,0.277102,0.146529,0.0245339,0.136609,0.214614,0.0973103,0.121587,0.0935301,0.0376876,0.200735,0.173595,0.105753,0.0905147,0.0544577,0.0065834,0.037671,0.203496,0.316207,0.246229,0.779726,0.112838,0.159217,0.1364,0.0640569,0.193163,0.311509,0.227801,0.282656,0.0439093,0.070163,0.188135,0.121467,0.0703645,0.0846706,0.0555742,0.349932,0.153706,0.186743,0.23397,0.412853,0.183121,0.065826,0.203135,0.0663482,0.463935,0.281162,0.218835,0.278686,0.0885874,0.129639,0.145577,0.22277,0.284267,0.27935,0.0586816,0.250461,0.195671,0.0452583,0.185103,0.11983,0.190123,0.286036,0.0660586,0.134265,0.272191,0.172119,0.0476023,0.196376,0.351465,0.18064,0.0772176,0.126988,0.0984435,0.110187,0.0164904,0.144361,0.0986228,0.0508565,0.0989516,0.21691,0.393782,0.412989,0.240045,0.319604,0.279218,0.0752697,0.167805,0.193654,0.180992,0.464566,0.265567,0.258402,0.162511,0.102771,0.165687,0.225173,0.540012,0.246322,0.253699,0.120044,0.201982,0.220536,0.139142,0.0987108,0.09782,0.0543538,0.554981,0.0687568,0.124225,0.1547,0.150448,0.0774663,0.398789,0.257365,0.331711,0.285222,0.511,0.158559,0.134615,0.186192,0.217494,0.132125,0.179065,0.0442413,0.187334,0.250769,0.289141,0.289982,0.157983,0.158078,0.251693,0.172268,0.313249,0.113261,0.180042,0.101058,0.274448,0.25718,0.204241,0.0568578,0.131428,0.131579,0.148683,0.188945,0.122666,0.419402,0.103245,0.387442,0.259312,0.14011,0.0626022,0.2074,0.769028,0.345431,0.115057,0.0907735,0.161661,0.552405,0.14374,0.493893,0.808889,0.396701,0.626645,0.541514,0.0247857,0.675971,0.487888,0.568246,0.486439,0.720623,0.215112,0.410803,0.43779,0.579996,0.569955,0.426202,0.19503,0.292173,0.173748,0.284119,0.601223,0.176507,0.488132,0.336705,0.237849,0.545464,0.277796,0.824163,0.356237,0.706516,0.537972,0.591562,0.668584,0.385794,0.417358,0.450485,0.299354,0.470142,0.344006,0.688397,0.45566,0.426591,0.467379,0.762263,0.437202,0.628658,0.761311,0.592924,0.438692,0.660225,0.251384,0.541742,0.420673,0.20757,0.285074,0.334686,0.323515,0.199887,0.415372,0.362164,0.289863,0.507647,0.365484,0.409489,0.226746,0.324858,0.699429,0.348378,0.379008,0.423719,0.655494,0.256985,0.109234,0.11883,0.288602,0.446598,0.69124,0.42637,0.588284,0.553251,0.732646,0.151407,0.260733,0.337121,0.464864,0.139288,0.0740433,0.121457,0.351733,0.522291,0.436555,0.687274,0.441154,0.503865,0.294103,0.43388,0.483295,0.300529,0.418989,0.296067,0.606622,0.350461,0.495024,0.307173,0.246694,0.752605,0.598317,0.666615,0.597346,0.702113,0.0186201,0.493489,0.229501,0.230597,0.0491086,0.544572,0.627794,0.641833,0.383956,0.241286,0.0764074,0.217887,0.393543,0.214395,0.158849,0.379156,0.439833,0.427746,0.504398,0.456725,0.455709,0.0698698,0.688249,0.708682,0.427794,0.398041,0.524026,0.347879,0.215832,0.227327,0.529253,0.64728,0.413091,0.319495,0.711229,0.257888,0.616333,0.407113,0.03302,0.387091,0.423517,0.0274367,0.268941,0.706243,0.251608,0.365107,0.0440487,0.356278,0.295455,0.144104,0.0972855,0.710825,0.486648,0.508875,0.725283,0.512109,0.658411,0.578577,0.244483,0.493686,0.0265465,0.113555,0.0910724,0.299839,0.126587,0.0940929,0.22877,0.343849,0.315824,0.255034,0.253771,0.29873,0.179502,0.43406,0.0715061,0.452515,0.201779,0.214491,0.171725,0.412647,0.102448,0.550877,0.029672,0.453305,0.421335,0.0510705,0.0762646,0.266371,0.183582,0.168118,0.145381,0.140277,0.251925,0.172066,0.0720324,0.00647589,0.19738,0.205854,0.32541,0.301472,0.507714,0.0818982,0.134306,0.108669,0.284804,0.178494,0.338195,0.490571,0.304235,0.210475,0.294266,0.0790025,0.310539,0.580279,0.203728,0.275452,0.288155,0.265827,0.141761,0.153627,0.0186891,0.342497,0.171961,0.415228,0.00800917,0.272406,0.223952,0.327153,0.0496113,0.20949,0.0730994,0.0857377,0.323267,0.24204,0.129414,0.157037,0.252398,0.197279,0.146467,0.0912686,0.106866,0.7034,0.218241,0.0242146,0.10708,0.327369,0.339826,0.12998,0.123097,0.254847,0.300809,0.0898207,0.126545,0.0918749,0.0686325,0.0569043,0.0639461,0.387306,0.267408,0.312064,0.080156,0.274185,0.53753,0.0545112,0.160961,0.33844,0.0649137,0.0974216,0.595767,0.195675,0.174786,0.176557,0.396547,0.0472148,0.0116134,0.229138,0.0639045,0.141461,0.0900204,0.228387,0.385962,0.334921,0.296227,0.208788,0.566117,0.36304,0.430936,0.123626,0.270619,0.132705,0.285556,0.493429,0.233835,0.224471,0.262929,0.223204,0.143824,0.127678,0.431098,0.0775891,0.153079,0.62577,0.211515,0.125701,0.175283,0.204954,0.209341,0.0472129,0.629422,0.084895,0.160115,0.0819954,0.10091,0.122658,0.151161,0.228398,0.056055,0.120552,0.41771,0.0772625,0.262721,0.335207,0.434016,0.190688,0.299739,0.278645,0.0454186,0.0940982,0.0780533,0.564811,0.0993772,0.274769,0.448923,0.11602,0.344528,0.436413,0.0585992,0.20045,0.274438,0.0534022,0.180484,0.319826,0.336512,0.173868,0.109708,0.174594,0.0809806,0.154589,0.318794,0.122767,0.0749261,0.176858,0.114361,0.347759,0.242462,0.0620267,0.211111,0.0738743,0.0882327,0.183058,0.150073,0.270522,0.16872,0.341388,0.0934526,0.359135,0.123404,0.430769,0.240825,0.3033,0.336623,0.163542,0.483244,0.27134,0.500871,0.239667,0.10226,0.29809,0.235147,0.689826,0.245965,0.116923,0.148426,0.0983658,0.228743,0.238223,0.156976,0.244789,0.267391,0.301441,0.21807,0.350528,0.382904,0.432408,0.190404,0.135865,0.488841,0.18137,0.180609,0.291283,0.273972,0.153023,0.400137,0.37958,0.22307,0.160699,0.0891264,0.166736,0.181253,0.0422294,0.263877,0.146486,0.431348,0.0379349,0.294204,0.131936,0.288826,0.246621,0.463617,0.335656,0.0965376,0.377203,0.279263,0.336564,0.35463,0.581771,0.47901,0.0594155,0.222245,0.208795,0.0713793,0.212621,0.063279,0.53612,0.629713,0.0583216,0.355154,0.730614,0.251388,0.537088,0.236988,0.629445,0.306963,0.569605,0.526495,0.580285,0.550495,0.424482,0.820986,0.0156811,0.359678,0.0100646,0.672416,0.321844,0.623136,0.349408,0.000273281,0.663441,0.349068,0.344004,0.476117,0.557035,0.427789,0.326931,0.386595,0.886619,0.433702,0.258394,0.0869065,0.432123,0.416657,0.661773,0.149969,0.0903515,0.392155,0.259088,0.371758,0.109303,0.0513067,0.380618,0.570752,0.254547,0.673352,0.51445,0.1082,0.133485,0.541378,0.117335,0.0958693,0.116,0.666904,0.0396564,0.315485,0.311289,0.0572024,0.4488,0.088424,0.236714,0.511254,0.193221,0.246387,0.224252,0.22199,0.155054,0.131605,0.518234,0.257848,0.0717012,0.192234,0.427276,0.0512135,0.131598,0.283682,0.424668,0.247468,0.474058,0.583101,0.341421,0.477016,0.263776,0.498956,0.465544,0.55798,0.349033,0.00662882,0.723248,0.34194,0.592696,0.062406,0.644904,0.380115,0.177129,0.317485,0.633504,0.220564,0.119459,0.262394,0.307462,0.135076,0.469588,0.664443,0.274593,0.147074,0.541363,0.709432,0.583627,0.531474,0.364391,0.562305,0.528646,0.361524,0.31558,0.412744,0.54408,0.0777665,0.513592,0.101553,0.815658,0.124718,0.0782908,0.181824,0.456862,0.453004,0.680686,0.0495146,0.693441,0.382214,0.553161,0.271769,0.68995,0.339393,0.117434,0.306231,0.298354,0.278436,0.0701109,0.457741,0.641611,0.426239,0.748909,0.656093,0.572661,0.0169327,0.534679,0.41502,0.55475,0.0962475,0.0394248,0.499347,0.307426,0.0736126,0.196912,0.490527,0.132075,0.44799,0.236683,0.318338,0.276338,0.126433,0.417412,0.318174,0.0555558,0.295666,0.393022,0.293641,0.116969,0.401231,0.255983,0.297663,0.256708,0.338258,0.322052,0.145568,0.153833,0.261242,0.38389,0.54721,0.388459,0.321362,0.627637,0.280757,0.301366,0.340343,0.343265,0.501812,0.462092,0.336254,0.308589,0.291523,0.19697,0.309816,0.0537285,0.15063,0.198077,0.281455,0.348739,0.419895,0.138495,0.208834,0.32256,0.377566,0.342366,0.109684,0.322704,0.403482,0.181288,0.230841,0.0709982,0.255358,0.351665,0.265112,0.0633313,0.10772,0.0854747,0.0747609,0.0968383,0.312881,0.512825,0.244656,0.192188,0.158985,0.174153,0.0972854,0.333309,0.249919,0.339517,0.303699,0.198326,0.394084,0.126349,0.282501,0.252005,0.390891,0.238377,0.334983,0.197875,0.287909,0.289389,0.117618,0.392533,0.396962,0.316002,0.330317,0.321404,0.225079,0.300542,0.379651,0.185715,0.345505,0.375521,0.271405,0.311201,0.221943,0.306427,0.367733,0.246925,0.208775,0.390438,0.343014,0.270094,0.0424726,0.156279,0.313647,0.461742,0.422872,0.336468,0.13327,0.313545,0.17149,0.0877361,0.0880065,0.238969,0.126615,0.0669467,0.0879453,0.474066,0.396935,0.326779,0.292869,0.358198,0.29552,0.131776,0.158116,0.104606,0.194814,0.104167,0.168186,0.108081,0.123829,0.205215,0.175247,0.0724304,0.109077,0.144842,0.0604892,0.214671,0.316879,0.442567,0.430541,0.508546,0.224871,0.398887,0.389061,0.310732,0.349611,0.445995,0.385709,0.278202,0.426488,0.400591,0.209809,0.253154,0.319519,0.309489,0.430805,0.362154,0.0289453,0.185476,0.336314,0.0676318,0.184651,0.303359,0.297596,0.42392,0.425912,0.0840133,0.259046,0.345068,0.151046,0.483953,0.347171,0.321735,0.15463,0.13907,0.470121,0.269432,0.250466,0.409882,0.115686,0.408975,0.162633,0.342661,0.27567,0.248127,0.33299,0.384731,0.319112,0.526476
|tfbs_overrepresentation=0.23317,0.0958562,0.62127,0.078254,0.310241,0.43203,0.0706464,0.5903,0.0539364,0.0424746,0.221396,0.346629,0.294377,0.201017,0.235304,0.101024,0.223746,0.158251,0.0865245,0.173528,0.29418,0.211047,0.13286,0.153106,0.0683222,0.332688,0.324018,0.146582,0.227906,0.150721,0.31768,0.182756,0.0298713,0.322378,0.108398,0.136785,0.132604,0.070583,0.192426,0.108683,0.155571,0.0406818,0.222325,0.287476,0.193292,0.0596699,0.0625547,0.28382,0.178503,0.193726,0.243359,0.0886583,0.114185,0.150136,0.308837,0.0632035,0.172598,0.328738,0.127101,0.169687,0.0485674,0.236408,0.174369,0.123348,0.0892839,0.0827236,0.164127,0.0980005,0.139298,0.262613,0.547889,0.110232,0.143944,0.190944,0.012429,0.0283664,0.155593,0.0717582,0.0613084,0.0120583,0.154245,0.348799,0.0698251,0.183986,0.436695,0.38341,0.104918,0.323505,0.46357,0.102375,0.138802,0.0812726,0.153861,0.0777027,0.138224,0.184264,0.769004,0.242703,0.149747,0.413729,0.0939617,0.416542,0.225088,0.0610111,0.337778,0.0672793,0.109136,0.497282,0.228612,0.407248,0.285407,0.0560173,0.23661,0.0293017,0.162943,0.0556189,0.0336673,0.0926302,0.220791,0.13579,0.262107,0.331577,0.222452,0.138843,0.164723,0.277102,0.146529,0.0245339,0.136609,0.214614,0.0973103,0.121587,0.0935301,0.0376876,0.200735,0.173595,0.105753,0.0905147,0.0544577,0.0065834,0.037671,0.203496,0.316207,0.246229,0.779726,0.112838,0.159217,0.1364,0.0640569,0.193163,0.311509,0.227801,0.282656,0.0439093,0.070163,0.188135,0.121467,0.0703645,0.0846706,0.0555742,0.349932,0.153706,0.186743,0.23397,0.412853,0.183121,0.065826,0.203135,0.0663482,0.463935,0.281162,0.218835,0.278686,0.0885874,0.129639,0.145577,0.22277,0.284267,0.27935,0.0586816,0.250461,0.195671,0.0452583,0.185103,0.11983,0.190123,0.286036,0.0660586,0.134265,0.272191,0.172119,0.0476023,0.196376,0.351465,0.18064,0.0772176,0.126988,0.0984435,0.110187,0.0164904,0.144361,0.0986228,0.0508565,0.0989516,0.21691,0.393782,0.412989,0.240045,0.319604,0.279218,0.0752697,0.167805,0.193654,0.180992,0.464566,0.265567,0.258402,0.162511,0.102771,0.165687,0.225173,0.540012,0.246322,0.253699,0.120044,0.201982,0.220536,0.139142,0.0987108,0.09782,0.0543538,0.554981,0.0687568,0.124225,0.1547,0.150448,0.0774663,0.398789,0.257365,0.331711,0.285222,0.511,0.158559,0.134615,0.186192,0.217494,0.132125,0.179065,0.0442413,0.187334,0.250769,0.289141,0.289982,0.157983,0.158078,0.251693,0.172268,0.313249,0.113261,0.180042,0.101058,0.274448,0.25718,0.204241,0.0568578,0.131428,0.131579,0.148683,0.188945,0.122666,0.419402,0.103245,0.387442,0.259312,0.14011,0.0626022,0.2074,0.769028,0.345431,0.115057,0.0907735,0.161661,0.552405,0.14374,0.493893,0.808889,0.396701,0.626645,0.541514,0.0247857,0.675971,0.487888,0.568246,0.486439,0.720623,0.215112,0.410803,0.43779,0.579996,0.569955,0.426202,0.19503,0.292173,0.173748,0.284119,0.601223,0.176507,0.488132,0.336705,0.237849,0.545464,0.277796,0.824163,0.356237,0.706516,0.537972,0.591562,0.668584,0.385794,0.417358,0.450485,0.299354,0.470142,0.344006,0.688397,0.45566,0.426591,0.467379,0.762263,0.437202,0.628658,0.761311,0.592924,0.438692,0.660225,0.251384,0.541742,0.420673,0.20757,0.285074,0.334686,0.323515,0.199887,0.415372,0.362164,0.289863,0.507647,0.365484,0.409489,0.226746,0.324858,0.699429,0.348378,0.379008,0.423719,0.655494,0.256985,0.109234,0.11883,0.288602,0.446598,0.69124,0.42637,0.588284,0.553251,0.732646,0.151407,0.260733,0.337121,0.464864,0.139288,0.0740433,0.121457,0.351733,0.522291,0.436555,0.687274,0.441154,0.503865,0.294103,0.43388,0.483295,0.300529,0.418989,0.296067,0.606622,0.350461,0.495024,0.307173,0.246694,0.752605,0.598317,0.666615,0.597346,0.702113,0.0186201,0.493489,0.229501,0.230597,0.0491086,0.544572,0.627794,0.641833,0.383956,0.241286,0.0764074,0.217887,0.393543,0.214395,0.158849,0.379156,0.439833,0.427746,0.504398,0.456725,0.455709,0.0698698,0.688249,0.708682,0.427794,0.398041,0.524026,0.347879,0.215832,0.227327,0.529253,0.64728,0.413091,0.319495,0.711229,0.257888,0.616333,0.407113,0.03302,0.387091,0.423517,0.0274367,0.268941,0.706243,0.251608,0.365107,0.0440487,0.356278,0.295455,0.144104,0.0972855,0.710825,0.486648,0.508875,0.725283,0.512109,0.658411,0.578577,0.244483,0.493686,0.0265465,0.113555,0.0910724,0.299839,0.126587,0.0940929,0.22877,0.343849,0.315824,0.255034,0.253771,0.29873,0.179502,0.43406,0.0715061,0.452515,0.201779,0.214491,0.171725,0.412647,0.102448,0.550877,0.029672,0.453305,0.421335,0.0510705,0.0762646,0.266371,0.183582,0.168118,0.145381,0.140277,0.251925,0.172066,0.0720324,0.00647589,0.19738,0.205854,0.32541,0.301472,0.507714,0.0818982,0.134306,0.108669,0.284804,0.178494,0.338195,0.490571,0.304235,0.210475,0.294266,0.0790025,0.310539,0.580279,0.203728,0.275452,0.288155,0.265827,0.141761,0.153627,0.0186891,0.342497,0.171961,0.415228,0.00800917,0.272406,0.223952,0.327153,0.0496113,0.20949,0.0730994,0.0857377,0.323267,0.24204,0.129414,0.157037,0.252398,0.197279,0.146467,0.0912686,0.106866,0.7034,0.218241,0.0242146,0.10708,0.327369,0.339826,0.12998,0.123097,0.254847,0.300809,0.0898207,0.126545,0.0918749,0.0686325,0.0569043,0.0639461,0.387306,0.267408,0.312064,0.080156,0.274185,0.53753,0.0545112,0.160961,0.33844,0.0649137,0.0974216,0.595767,0.195675,0.174786,0.176557,0.396547,0.0472148,0.0116134,0.229138,0.0639045,0.141461,0.0900204,0.228387,0.385962,0.334921,0.296227,0.208788,0.566117,0.36304,0.430936,0.123626,0.270619,0.132705,0.285556,0.493429,0.233835,0.224471,0.262929,0.223204,0.143824,0.127678,0.431098,0.0775891,0.153079,0.62577,0.211515,0.125701,0.175283,0.204954,0.209341,0.0472129,0.629422,0.084895,0.160115,0.0819954,0.10091,0.122658,0.151161,0.228398,0.056055,0.120552,0.41771,0.0772625,0.262721,0.335207,0.434016,0.190688,0.299739,0.278645,0.0454186,0.0940982,0.0780533,0.564811,0.0993772,0.274769,0.448923,0.11602,0.344528,0.436413,0.0585992,0.20045,0.274438,0.0534022,0.180484,0.319826,0.336512,0.173868,0.109708,0.174594,0.0809806,0.154589,0.318794,0.122767,0.0749261,0.176858,0.114361,0.347759,0.242462,0.0620267,0.211111,0.0738743,0.0882327,0.183058,0.150073,0.270522,0.16872,0.341388,0.0934526,0.359135,0.123404,0.430769,0.240825,0.3033,0.336623,0.163542,0.483244,0.27134,0.500871,0.239667,0.10226,0.29809,0.235147,0.689826,0.245965,0.116923,0.148426,0.0983658,0.228743,0.238223,0.156976,0.244789,0.267391,0.301441,0.21807,0.350528,0.382904,0.432408,0.190404,0.135865,0.488841,0.18137,0.180609,0.291283,0.273972,0.153023,0.400137,0.37958,0.22307,0.160699,0.0891264,0.166736,0.181253,0.0422294,0.263877,0.146486,0.431348,0.0379349,0.294204,0.131936,0.288826,0.246621,0.463617,0.335656,0.0965376,0.377203,0.279263,0.336564,0.35463,0.581771,0.47901,0.0594155,0.222245,0.208795,0.0713793,0.212621,0.063279,0.53612,0.629713,0.0583216,0.355154,0.730614,0.251388,0.537088,0.236988,0.629445,0.306963,0.569605,0.526495,0.580285,0.550495,0.424482,0.820986,0.0156811,0.359678,0.0100646,0.672416,0.321844,0.623136,0.349408,0.000273281,0.663441,0.349068,0.344004,0.476117,0.557035,0.427789,0.326931,0.386595,0.886619,0.433702,0.258394,0.0869065,0.432123,0.416657,0.661773,0.149969,0.0903515,0.392155,0.259088,0.371758,0.109303,0.0513067,0.380618,0.570752,0.254547,0.673352,0.51445,0.1082,0.133485,0.541378,0.117335,0.0958693,0.116,0.666904,0.0396564,0.315485,0.311289,0.0572024,0.4488,0.088424,0.236714,0.511254,0.193221,0.246387,0.224252,0.22199,0.155054,0.131605,0.518234,0.257848,0.0717012,0.192234,0.427276,0.0512135,0.131598,0.283682,0.424668,0.247468,0.474058,0.583101,0.341421,0.477016,0.263776,0.498956,0.465544,0.55798,0.349033,0.00662882,0.723248,0.34194,0.592696,0.062406,0.644904,0.380115,0.177129,0.317485,0.633504,0.220564,0.119459,0.262394,0.307462,0.135076,0.469588,0.664443,0.274593,0.147074,0.541363,0.709432,0.583627,0.531474,0.364391,0.562305,0.528646,0.361524,0.31558,0.412744,0.54408,0.0777665,0.513592,0.101553,0.815658,0.124718,0.0782908,0.181824,0.456862,0.453004,0.680686,0.0495146,0.693441,0.382214,0.553161,0.271769,0.68995,0.339393,0.117434,0.306231,0.298354,0.278436,0.0701109,0.457741,0.641611,0.426239,0.748909,0.656093,0.572661,0.0169327,0.534679,0.41502,0.55475,0.0962475,0.0394248,0.499347,0.307426,0.0736126,0.196912,0.490527,0.132075,0.44799,0.236683,0.318338,0.276338,0.126433,0.417412,0.318174,0.0555558,0.295666,0.393022,0.293641,0.116969,0.401231,0.255983,0.297663,0.256708,0.338258,0.322052,0.145568,0.153833,0.261242,0.38389,0.54721,0.388459,0.321362,0.627637,0.280757,0.301366,0.340343,0.343265,0.501812,0.462092,0.336254,0.308589,0.291523,0.19697,0.309816,0.0537285,0.15063,0.198077,0.281455,0.348739,0.419895,0.138495,0.208834,0.32256,0.377566,0.342366,0.109684,0.322704,0.403482,0.181288,0.230841,0.0709982,0.255358,0.351665,0.265112,0.0633313,0.10772,0.0854747,0.0747609,0.0968383,0.312881,0.512825,0.244656,0.192188,0.158985,0.174153,0.0972854,0.333309,0.249919,0.339517,0.303699,0.198326,0.394084,0.126349,0.282501,0.252005,0.390891,0.238377,0.334983,0.197875,0.287909,0.289389,0.117618,0.392533,0.396962,0.316002,0.330317,0.321404,0.225079,0.300542,0.379651,0.185715,0.345505,0.375521,0.271405,0.311201,0.221943,0.306427,0.367733,0.246925,0.208775,0.390438,0.343014,0.270094,0.0424726,0.156279,0.313647,0.461742,0.422872,0.336468,0.13327,0.313545,0.17149,0.0877361,0.0880065,0.238969,0.126615,0.0669467,0.0879453,0.474066,0.396935,0.326779,0.292869,0.358198,0.29552,0.131776,0.158116,0.104606,0.194814,0.104167,0.168186,0.108081,0.123829,0.205215,0.175247,0.0724304,0.109077,0.144842,0.0604892,0.214671,0.316879,0.442567,0.430541,0.508546,0.224871,0.398887,0.389061,0.310732,0.349611,0.445995,0.385709,0.278202,0.426488,0.400591,0.209809,0.253154,0.319519,0.309489,0.430805,0.362154,0.0289453,0.185476,0.336314,0.0676318,0.184651,0.303359,0.297596,0.42392,0.425912,0.0840133,0.259046,0.345068,0.151046,0.483953,0.347171,0.321735,0.15463,0.13907,0.470121,0.269432,0.250466,0.409882,0.115686,0.408975,0.162633,0.342661,0.27567,0.248127,0.33299,0.384731,0.319112,0.526476
}}
}}

Revision as of 11:40, 19 October 2012


Full id: C1765_Renal_Hepatic_Endothelial_placenta_Lymphatic_breast_lung



Phase1 CAGE Peaks

Hg19::chr16:67224002..67224047,-p1@EXOC3L1
Hg19::chr19:17375527..17375538,-p2@USHBP1
Hg19::chr5:180076580..180076605,-p1@FLT4
Hg19::chr5:180076613..180076634,-p2@FLT4
Hg19::chr9:80263579..80263618,-p2@GNA14


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data


No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data


GO IDGO nameFDR corrected p-value
GO:0048010vascular endothelial growth factor receptor signaling pathway0.0435920646625478
GO:0030165PDZ domain binding0.0435920646625478
GO:0005021vascular endothelial growth factor receptor activity0.0435920646625478
GO:0006471protein amino acid ADP-ribosylation0.0435920646625478
GO:0005834heterotrimeric G-protein complex0.0496118168482225



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>


Uber Anatomy
Ontology termp-valuen
adult organism4.14e-56114
anatomical conduit8.33e-23240
anatomical cluster7.12e-21373
tube1.00e-19192
neural tube5.61e-1856
neural rod5.61e-1856
future spinal cord5.61e-1856
neural keel5.61e-1856
blood vessel endothelium1.83e-1618
endothelium1.83e-1618
cardiovascular system endothelium1.83e-1618
regional part of nervous system7.37e-1653
regional part of brain7.37e-1653
regional part of forebrain9.05e-1541
forebrain9.05e-1541
anterior neural tube9.05e-1541
future forebrain9.05e-1541
brain grey matter4.01e-1434
gray matter4.01e-1434
telencephalon5.42e-1434
central nervous system1.44e-1381
cerebral hemisphere1.01e-1232
regional part of telencephalon1.06e-1232
neural plate1.47e-1282
presumptive neural plate1.47e-1282
simple squamous epithelium1.65e-1222
neurectoderm1.87e-1186
multi-cellular organism3.42e-11656
regional part of cerebral cortex3.90e-1122
nervous system4.39e-1189
organ system subdivision5.00e-11223
neocortex6.26e-1120
brain9.61e-1168
future brain9.61e-1168
structure with developmental contribution from neural crest1.00e-10132
squamous epithelium2.11e-1025
cell layer1.01e-09309
epithelium1.29e-09306
vessel2.46e-0968
cerebral cortex2.69e-0925
pallium2.69e-0925
anatomical system8.46e-09624
anatomical group1.01e-08625
lymphoid system1.01e-0810
ecto-epithelium2.77e-08104
pre-chordal neural plate2.89e-0861
embryo1.08e-07592
splanchnic layer of lateral plate mesoderm1.67e-0783
multi-tissue structure1.80e-07342
vein2.59e-079
venous blood vessel2.59e-079
venous system2.59e-079
vasculature4.46e-0778
vascular system4.46e-0778
lymphatic vessel7.83e-078
lymph vasculature7.83e-078
lymphatic part of lymphoid system7.83e-078
circulatory system1.00e-06112


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data


Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data


No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data


This analysis result is provided for C0 - C305 clusters.