FFCP PHASE1:Hg19::chr19:50031252..50031285,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.87e-48!180;CL:0000057!2.44e-24!75;CL:0000680!8.18e-24!57;CL:0000056!8.18e-24!57;CL:0000355!8.18e-24!57;CL:0000183!1.19e-23!59;CL:0000187!2.20e-22!54;CL:0000393!1.59e-20!60;CL:0000211!1.59e-20!60;CL:0000192!7.31e-20!42;CL:0000514!7.31e-20!42;CL:0000222!7.46e-19!119;CL:0000359!7.62e-17!32;CL:0000048!6.54e-11!430;CL:0002620!6.57e-11!23;CL:0002371!1.01e-10!591;CL:0000723!1.03e-09!436;CL:0000034!3.40e-09!444;CL:0000144!1.22e-08!625;CL:0002494!2.15e-07!16 | |ontology_enrichment_celltype=CL:0000055!2.87e-48!180;CL:0000057!2.44e-24!75;CL:0000680!8.18e-24!57;CL:0000056!8.18e-24!57;CL:0000355!8.18e-24!57;CL:0000183!1.19e-23!59;CL:0000187!2.20e-22!54;CL:0000393!1.59e-20!60;CL:0000211!1.59e-20!60;CL:0000192!7.31e-20!42;CL:0000514!7.31e-20!42;CL:0000222!7.46e-19!119;CL:0000359!7.62e-17!32;CL:0000048!6.54e-11!430;CL:0002620!6.57e-11!23;CL:0002371!1.01e-10!591;CL:0000723!1.03e-09!436;CL:0000034!3.40e-09!444;CL:0000144!1.22e-08!625;CL:0002494!2.15e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.63e-16;32!CL:0000192;6.72e-15;43!CL:0000187;6.01e-13;55!CL:0002620;3.17e-11;23!CL:0000393;5.08e-11;61!CL:0000211;5.08e-11;61!CL:0000134;7.63e-11;55!CL:0000057;1.74e-10;73!CL:0000723;4.91e-10;61!CL:0000048;1.04e-09;58!CL:0002320;4.37e-09;188!CL:0002494;1.34e-07;16!CL:0000034;1.44e-07;69 | |ontology_enrichment_celltype_v019=CL:0000359;2.63e-16;32!CL:0000192;6.72e-15;43!CL:0000187;6.01e-13;55!CL:0002620;3.17e-11;23!CL:0000393;5.08e-11;61!CL:0000211;5.08e-11;61!CL:0000134;7.63e-11;55!CL:0000057;1.74e-10;73!CL:0000723;4.91e-10;61!CL:0000048;1.04e-09;58!CL:0002320;4.37e-09;188!CL:0002494;1.34e-07;16!CL:0000034;1.44e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.12e-26,76;CL:0000680,8.15e-25,58;CL:0000056,8.15e-25,58;CL:0000355,8.15e-25,58;CL:0000187,2.46e-23,55;CL:0000393,2.00e-21,61;CL:0000211,2.00e-21,61;CL:0000192,1.04e-20,43;CL:0000514,1.04e-20,43;CL:0000222,5.73e-19,121;CL:0000359,2.36e-17,32;CL:0000048,4.01e-13,427;CL:0000723,6.96e-12,433;CL:0000034,2.65e-11,441;CL:0002620,3.21e-11,23;CL:0002494,1.37e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;6.72e-15;43!CL:0000355;2.91e-13;58 | |ontology_enrichment_development_v019=CL:0000514;6.72e-15;43!CL:0000355;2.91e-13;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@RCN3 | |short_description=p1@RCN3 | ||
}} | }} |
Revision as of 01:20, 18 November 2012
Short description: | p1@RCN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RCN3_5end |
Coexpression cluster: | C750_Smooth_Mesenchymal_Fibroblast_Hepatic_Chondrocyte_Lens_tenocyte |
Association with transcript: | 377bp_to_ENST00000270645, NM_020650, uc002poj.2_5end |
EntrezGene: | RCN3 |
HGNC: | 21145 |
UniProt: | Q96D15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.12e-26 | 76 |
muscle precursor cell | 8.15e-25 | 58 |
myoblast | 8.15e-25 | 58 |
multi-potent skeletal muscle stem cell | 8.15e-25 | 58 |
muscle cell | 2.46e-23 | 55 |
electrically responsive cell | 2.00e-21 | 61 |
electrically active cell | 2.00e-21 | 61 |
smooth muscle cell | 1.04e-20 | 43 |
smooth muscle myoblast | 1.04e-20 | 43 |
mesodermal cell | 5.73e-19 | 121 |
vascular associated smooth muscle cell | 2.36e-17 | 32 |
multi fate stem cell | 4.01e-13 | 427 |
somatic stem cell | 6.96e-12 | 433 |
stem cell | 2.65e-11 | 441 |
skin fibroblast | 3.21e-11 | 23 |
cardiocyte | 1.37e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.