FFCP PHASE1:Hg19::chr10:11206815..11206859,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10659|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2550|TSSclassifier=S|UniProt=Q5VZZ6,O95319|association_with_transcript=-133bp_to_ENST00000315874,ENST00000354440,ENST00000354897,ENST00000427450,NM_001025076,NM_001083591,uc001iko.3,uc001ikp.3,uc010qbk.1,uc010qbl.1,uc010qbm.1_5end|description=CAGE_peak_8_at_CELF2_5end|id=chr10:11206815..11206859,+|ontology_enrichment_celltype=CL:0000037!8.85e-37!172;CL:0000566!8.85e-37!172;CL:0000988!1.97e-34!182;CL:0002032!1.46e-32!165;CL:0000837!1.46e-32!165;CL:0000738!4.12e-29!140;CL:0000542!3.56e-23!53;CL:0000051!3.56e-23!53;CL:0000838!9.96e-23!52;CL:0002087!3.92e-22!119;CL:0002031!1.43e-20!124;CL:0000084!1.33e-19!25;CL:0000827!1.33e-19!25;CL:0000791!5.07e-16!18;CL:0000789!5.07e-16!18;CL:0002420!5.07e-16!18;CL:0002419!5.07e-16!18;CL:0000790!5.07e-16!18;CL:0000763!4.12e-12!112;CL:0000049!4.12e-12!112;CL:0000625!2.01e-10!11|ontology_enrichment_celltype_v019=CL:0000084;3.18e-28;25!CL:0000791;7.12e-23;18!CL:0000789;7.12e-23;18!CL:0002419;7.12e-23;18!CL:0000542;5.90e-16;53!CL:0000625;1.30e-14;11!CL:0000624;8.22e-09;6!CL:0002087;3.30e-07;104|ontology_enrichment_celltype_v019_2=CL:0000037,5.77e-33,168;CL:0000988,1.18e-30,177;CL:0000542,1.75e-29,53;CL:0000051,1.75e-29,53;CL:0000838,7.86e-29,52;CL:0002032,1.31e-28,161;CL:0000837,1.31e-28,161;CL:0000084,3.68e-28,25;CL:0000827,3.68e-28,25;CL:0000738,3.64e-24,136;CL:0000791,7.19e-23,18;CL:0000789,7.19e-23,18;CL:0002420,7.19e-23,18;CL:0002419,7.19e-23,18;CL:0000790,7.19e-23,18;CL:0002087,7.96e-16,115;CL:0002031,5.97e-15,120;CL:0000625,1.30e-14,11;CL:0000624,8.19e-09,6;CL:0000763,5.00e-07,108;CL:0000049,5.00e-07,108|ontology_enrichment_development_v019=CL:0000790;7.12e-23;18!CL:0000051;5.90e-16;53|ontology_enrichment_disease=DOID:1240!7.64e-13!39;DOID:2531!7.36e-11!51;DOID:0060083!7.36e-11!51;DOID:8692!5.87e-09!31|ontology_enrichment_disease_v019=DOID:1240;1.10e-11;39!DOID:2531;9.41e-09;51!DOID:0060083;9.41e-09;51!DOID:8692;2.97e-08;31|ontology_enrichment_disease_v019_2=DOID:1240,6.87e-14,39;DOID:2531,1.70e-12,51;DOID:0060083,1.70e-12,51;DOID:8692,1.13e-08,31|ontology_enrichment_uberon=UBERON:0007023!2.87e-26!115;UBERON:0001049!1.46e-13!57;UBERON:0005068!1.46e-13!57;UBERON:0006241!1.46e-13!57;UBERON:0007135!1.46e-13!57;UBERON:0002020!8.47e-12!34;UBERON:0003528!8.47e-12!34;UBERON:0001893!1.28e-11!34;UBERON:0002791!2.63e-11!33;UBERON:0001869!7.04e-11!32;UBERON:0000178!1.29e-10!15;UBERON:0000179!1.29e-10!15;UBERON:0000463!1.29e-10!15;UBERON:0003080!1.34e-10!42;UBERON:0002390!1.48e-10!102;UBERON:0003061!1.48e-10!102;UBERON:0001017!1.73e-10!82;UBERON:0002780!2.41e-10!41;UBERON:0001890!2.41e-10!41;UBERON:0006240!2.41e-10!41;UBERON:0002616!5.77e-10!59;UBERON:0005743!7.81e-10!86;UBERON:0002193!3.53e-09!112;UBERON:0000956!4.07e-09!25;UBERON:0000203!4.07e-09!25;UBERON:0002619!5.74e-09!22;UBERON:0000073!8.21e-09!94;UBERON:0001016!8.21e-09!94;UBERON:0000955!4.08e-08!69;UBERON:0006238!4.08e-08!69;UBERON:0001950!5.93e-08!20;UBERON:0003075!3.65e-07!86;UBERON:0007284!3.65e-07!86|ontology_enrichment_uberon_v019=UBERON:0000178;3.51e-12;15!UBERON:0000179;3.51e-12;15!UBERON:0000463;3.51e-12;15!UBERON:0002619;8.27e-09;22!UBERON:0002390;1.00e-08;32!UBERON:0001950;1.83e-07;20!UBERON:0000956;2.66e-07;25!UBERON:0000203;2.66e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.55e-12,15;UBERON:0000179,4.55e-12,15;UBERON:0000463,4.55e-12,15;UBERON:0007023,5.89e-10,114;UBERON:0002619,1.07e-08,22;UBERON:0001049,1.94e-08,56;UBERON:0005068,1.94e-08,56;UBERON:0006241,1.94e-08,56;UBERON:0007135,1.94e-08,56;UBERON:0004177,2.69e-08,7;UBERON:0005057,2.69e-08,7;UBERON:0001950,2.36e-07,20;UBERON:0000956,3.31e-07,25;UBERON:0000203,3.31e-07,25;UBERON:0003528,3.56e-07,34;UBERON:0002020,3.56e-07,34;UBERON:0000073,5.72e-07,53;UBERON:0002616,5.72e-07,53|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.251085279189606,8.63471484951849,7.79955599774485,8.57947516319104,3.14691421479123,10.3633937486247,5.57338043937874,0,0,0,0,0,10.8632162553893,3.87796785972314,7.62068900386538,4.55722828503289,1.11957737119962,6.15397965436061,1.28787783817093,0.436194716338694,0.377875943688809,0,0,0.822335776043652,0,0.575384784644301,0.512321413058201,0,0,1.93645405075148,0,0,0.545812300115692,0.449446968890169,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0,0.290209238628584,0,0.622822248995575,0.502497330513487,0.521482918420201,0,1.81619850790011,1.47311054395026,0.316462387440884,0.211255286311942,0.850417199860174,0.838634582033504,0.786300418025466,0.450530678524519,0.16072558669708,0.855038231223746,1.19350006319454,0.365328307529268,0,0,1.77901850772711,0.853460445133014,2.80277190925209,0.574752439954483,0.661044872784862,0.954053754535364,4.55370375287559,3.52342313622563,1.91136614062614,19.8256992868539,16.2547483264645,1.58030450865046,21.244655172294,18.4715058492107,12.5416914389701,7.69057878797119,13.3628129319772,13.2565385605725,23.3792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929,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0,1.69783147837478,0.655678681511872,0,0.245148321753905,0,2.74831853960923,2.67341760294377,3.3812458206672,0,3.28943712929488,3.02952073475813,1.59905849479886,0,0,0,0.730336388246517,1.37618785021362,1.14671666521161,0.315543124386369,1.35982980381829,4.36350690340377,2.1161073620616,0,0,0,0,0.109265571963696,0,0,0,0,0,0.378893491091197,0.267964130156178,0,2.89612388413307,1.0661699095049,0.476128862927481,10.075869934417,18.5603395744615,0,0.25458863311266,0,0.653150243690884,0,3.56965880977314,0.573777643141411,0,0,0,0,0,0,0.366724332548599,0.813792356631477,0.665756774185513,3.8242020782295,6.41136984606466|short_description=p8@CELF2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2550 | |||
|TSSclassifier=S | |||
|UniProt=Q5VZZ6,O95319 | |||
|association_with_transcript=-133bp_to_ENST00000315874,ENST00000354440,ENST00000354897,ENST00000427450,NM_001025076,NM_001083591,uc001iko.3,uc001ikp.3,uc010qbk.1,uc010qbl.1,uc010qbm.1_5end | |||
|description=CAGE_peak_8_at_CELF2_5end | |||
|id=chr10:11206815..11206859,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.85e-37!172;CL:0000566!8.85e-37!172;CL:0000988!1.97e-34!182;CL:0002032!1.46e-32!165;CL:0000837!1.46e-32!165;CL:0000738!4.12e-29!140;CL:0000542!3.56e-23!53;CL:0000051!3.56e-23!53;CL:0000838!9.96e-23!52;CL:0002087!3.92e-22!119;CL:0002031!1.43e-20!124;CL:0000084!1.33e-19!25;CL:0000827!1.33e-19!25;CL:0000791!5.07e-16!18;CL:0000789!5.07e-16!18;CL:0002420!5.07e-16!18;CL:0002419!5.07e-16!18;CL:0000790!5.07e-16!18;CL:0000763!4.12e-12!112;CL:0000049!4.12e-12!112;CL:0000625!2.01e-10!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.18e-28;25!CL:0000791;7.12e-23;18!CL:0000789;7.12e-23;18!CL:0002419;7.12e-23;18!CL:0000542;5.90e-16;53!CL:0000625;1.30e-14;11!CL:0000624;8.22e-09;6!CL:0002087;3.30e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.77e-33,168;CL:0000988,1.18e-30,177;CL:0000542,1.75e-29,53;CL:0000051,1.75e-29,53;CL:0000838,7.86e-29,52;CL:0002032,1.31e-28,161;CL:0000837,1.31e-28,161;CL:0000084,3.68e-28,25;CL:0000827,3.68e-28,25;CL:0000738,3.64e-24,136;CL:0000791,7.19e-23,18;CL:0000789,7.19e-23,18;CL:0002420,7.19e-23,18;CL:0002419,7.19e-23,18;CL:0000790,7.19e-23,18;CL:0002087,7.96e-16,115;CL:0002031,5.97e-15,120;CL:0000625,1.30e-14,11;CL:0000624,8.19e-09,6;CL:0000763,5.00e-07,108;CL:0000049,5.00e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;7.12e-23;18!CL:0000051;5.90e-16;53 | |||
|ontology_enrichment_disease=DOID:1240!7.64e-13!39;DOID:2531!7.36e-11!51;DOID:0060083!7.36e-11!51;DOID:8692!5.87e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.10e-11;39!DOID:2531;9.41e-09;51!DOID:0060083;9.41e-09;51!DOID:8692;2.97e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,6.87e-14,39;DOID:2531,1.70e-12,51;DOID:0060083,1.70e-12,51;DOID:8692,1.13e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.87e-26!115;UBERON:0001049!1.46e-13!57;UBERON:0005068!1.46e-13!57;UBERON:0006241!1.46e-13!57;UBERON:0007135!1.46e-13!57;UBERON:0002020!8.47e-12!34;UBERON:0003528!8.47e-12!34;UBERON:0001893!1.28e-11!34;UBERON:0002791!2.63e-11!33;UBERON:0001869!7.04e-11!32;UBERON:0000178!1.29e-10!15;UBERON:0000179!1.29e-10!15;UBERON:0000463!1.29e-10!15;UBERON:0003080!1.34e-10!42;UBERON:0002390!1.48e-10!102;UBERON:0003061!1.48e-10!102;UBERON:0001017!1.73e-10!82;UBERON:0002780!2.41e-10!41;UBERON:0001890!2.41e-10!41;UBERON:0006240!2.41e-10!41;UBERON:0002616!5.77e-10!59;UBERON:0005743!7.81e-10!86;UBERON:0002193!3.53e-09!112;UBERON:0000956!4.07e-09!25;UBERON:0000203!4.07e-09!25;UBERON:0002619!5.74e-09!22;UBERON:0000073!8.21e-09!94;UBERON:0001016!8.21e-09!94;UBERON:0000955!4.08e-08!69;UBERON:0006238!4.08e-08!69;UBERON:0001950!5.93e-08!20;UBERON:0003075!3.65e-07!86;UBERON:0007284!3.65e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.51e-12;15!UBERON:0000179;3.51e-12;15!UBERON:0000463;3.51e-12;15!UBERON:0002619;8.27e-09;22!UBERON:0002390;1.00e-08;32!UBERON:0001950;1.83e-07;20!UBERON:0000956;2.66e-07;25!UBERON:0000203;2.66e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.55e-12,15;UBERON:0000179,4.55e-12,15;UBERON:0000463,4.55e-12,15;UBERON:0007023,5.89e-10,114;UBERON:0002619,1.07e-08,22;UBERON:0001049,1.94e-08,56;UBERON:0005068,1.94e-08,56;UBERON:0006241,1.94e-08,56;UBERON:0007135,1.94e-08,56;UBERON:0004177,2.69e-08,7;UBERON:0005057,2.69e-08,7;UBERON:0001950,2.36e-07,20;UBERON:0000956,3.31e-07,25;UBERON:0000203,3.31e-07,25;UBERON:0003528,3.56e-07,34;UBERON:0002020,3.56e-07,34;UBERON:0000073,5.72e-07,53;UBERON:0002616,5.72e-07,53 | |||
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| |||
|short_description=p8@CELF2 | |||
}} |
Revision as of 11:42, 10 September 2013
Short description: | p8@CELF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_CELF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -133bp_to_ENST00000315874, ENST00000354440, ENST00000354897, ENST00000427450, NM_001025076, NM_001083591, uc001iko.3, uc001ikp.3, uc010qbk.1, uc010qbl.1, uc010qbm.1_5end |
EntrezGene: | CELF2 |
HGNC: | 2550 |
UniProt: | Q5VZZ6O95319 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.77e-33 | 168 |
hematopoietic cell | 1.18e-30 | 177 |
lymphocyte | 1.75e-29 | 53 |
common lymphoid progenitor | 1.75e-29 | 53 |
lymphoid lineage restricted progenitor cell | 7.86e-29 | 52 |
hematopoietic oligopotent progenitor cell | 1.31e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-28 | 161 |
T cell | 3.68e-28 | 25 |
pro-T cell | 3.68e-28 | 25 |
leukocyte | 3.64e-24 | 136 |
mature alpha-beta T cell | 7.19e-23 | 18 |
alpha-beta T cell | 7.19e-23 | 18 |
immature T cell | 7.19e-23 | 18 |
mature T cell | 7.19e-23 | 18 |
immature alpha-beta T cell | 7.19e-23 | 18 |
nongranular leukocyte | 7.96e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.97e-15 | 120 |
CD8-positive, alpha-beta T cell | 1.30e-14 | 11 |
CD4-positive, alpha-beta T cell | 8.19e-09 | 6 |
myeloid cell | 5.00e-07 | 108 |
common myeloid progenitor | 5.00e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 4.55e-12 | 15 |
haemolymphatic fluid | 4.55e-12 | 15 |
organism substance | 4.55e-12 | 15 |
adult organism | 5.89e-10 | 114 |
regional part of cerebral cortex | 1.07e-08 | 22 |
neural tube | 1.94e-08 | 56 |
neural rod | 1.94e-08 | 56 |
future spinal cord | 1.94e-08 | 56 |
neural keel | 1.94e-08 | 56 |
hemopoietic organ | 2.69e-08 | 7 |
immune organ | 2.69e-08 | 7 |
neocortex | 2.36e-07 | 20 |
cerebral cortex | 3.31e-07 | 25 |
pallium | 3.31e-07 | 25 |
brain grey matter | 3.56e-07 | 34 |
gray matter | 3.56e-07 | 34 |
regional part of nervous system | 5.72e-07 | 53 |
regional part of brain | 5.72e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
leukemia | 6.87e-14 | 39 |
hematologic cancer | 1.70e-12 | 51 |
immune system cancer | 1.70e-12 | 51 |
myeloid leukemia | 1.13e-08 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.