FFCP PHASE1:Hg19::chr16:27413524..27413547,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=50615|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6006|TSSclassifier=S|UniProt=Q9HBE5|association_with_transcript=41bp_to_NM_181078,NM_181079_5end|coexpression_cluster_id=C911|description=CAGE_peak_2_at_IL21R_5end|id=chr16:27413524..27413547,+|ontology_enrichment_celltype=CL:0000738!3.85e-61!140;CL:0000988!2.91e-59!182;CL:0000037!6.19e-59!172;CL:0000566!6.19e-59!172;CL:0002032!1.55e-55!165;CL:0000837!1.55e-55!165;CL:0002087!2.13e-55!119;CL:0002031!6.17e-52!124;CL:0000542!1.39e-32!53;CL:0000051!1.39e-32!53;CL:0000838!4.75e-32!52;CL:0000763!1.96e-23!112;CL:0000049!1.96e-23!112;CL:0000766!2.01e-22!76;CL:0002009!1.70e-21!65;CL:0002194!2.29e-20!63;CL:0000576!2.29e-20!63;CL:0000040!2.29e-20!63;CL:0000559!2.29e-20!63;CL:0000557!3.88e-20!71;CL:0000839!4.61e-19!70;CL:0002057!1.01e-18!42;CL:0000134!3.66e-17!358;CL:0000860!2.88e-16!45;CL:0002320!3.20e-16!365;CL:0000084!1.76e-15!25;CL:0000827!1.76e-15!25;CL:0000945!3.16e-15!24;CL:0000826!3.16e-15!24;CL:0000791!2.60e-14!18;CL:0000789!2.60e-14!18;CL:0002420!2.60e-14!18;CL:0002419!2.60e-14!18;CL:0000790!2.60e-14!18;CL:0000219!4.68e-12!390;CL:0000048!2.05e-10!430;CL:0000723!1.67e-09!436;CL:0000625!2.49e-09!11;CL:0000034!3.34e-09!444;CL:0000236!4.52e-09!14|ontology_enrichment_celltype_v019=CL:0000542;2.10e-23;53!CL:0002087;5.13e-20;104!CL:0000791;3.07e-19;18!CL:0000789;3.07e-19;18!CL:0002419;3.07e-19;18!CL:0000084;3.19e-19;25!CL:0000945;1.27e-18;24!CL:0000576;2.24e-16;48!CL:0000738;4.16e-16;136!CL:0000860;5.42e-15;33!CL:0002057;5.42e-15;33!CL:0000473;4.81e-14;39!CL:0000234;4.81e-14;39!CL:0000766;6.63e-13;69!CL:0000625;2.61e-12;11!CL:0000988;2.96e-11;177!CL:0000236;2.05e-09;13!CL:0000763;3.25e-08;100!CL:0000451;3.73e-08;10!CL:0000624;4.14e-08;6!CL:0000219;1.25e-07;193!CL:0000990;2.11e-07;8|ontology_enrichment_celltype_v019_2=CL:0000738,1.26e-81,136;CL:0002087,1.16e-74,115;CL:0000988,4.13e-73,177;CL:0000037,1.42e-72,168;CL:0002032,6.73e-70,161;CL:0000837,6.73e-70,161;CL:0002031,4.21e-69,120;CL:0000542,6.02e-41,53;CL:0000051,6.02e-41,53;CL:0000838,3.33e-40,52;CL:0000766,9.54e-32,72;CL:0002009,1.67e-30,61;CL:0000763,5.12e-29,108;CL:0000049,5.12e-29,108;CL:0002194,6.66e-29,59;CL:0000576,6.66e-29,59;CL:0000040,6.66e-29,59;CL:0000559,6.66e-29,59;CL:0000557,1.60e-28,67;CL:0000839,2.72e-26,66;CL:0000473,1.82e-24,48;CL:0000234,1.82e-24,48;CL:0000860,9.87e-23,42;CL:0002057,9.87e-23,42;CL:0000134,7.21e-20,354;CL:0000791,3.25e-19,18;CL:0000789,3.25e-19,18;CL:0002420,3.25e-19,18;CL:0002419,3.25e-19,18;CL:0000790,3.25e-19,18;CL:0000084,3.49e-19,25;CL:0000827,3.49e-19,25;CL:0002320,1.12e-18,361;CL:0000945,1.26e-18,24;CL:0000826,1.26e-18,24;CL:0000219,1.40e-14,386;CL:0000625,2.57e-12,11;CL:0000048,6.96e-11,427;CL:0000034,2.71e-10,441;CL:0000723,3.17e-10,433;CL:0000236,3.40e-10,14;CL:0000451,3.37e-08,10;CL:0000624,4.06e-08,6;CL:0002393,4.75e-08,9;CL:0002397,4.75e-08,9;CL:0000990,1.60e-07,8|ontology_enrichment_development_v019=CL:0000051;2.10e-23;53!CL:0000790;3.07e-19;18!CL:0002057;7.74e-17;42!CL:0000049;1.32e-08;108|ontology_enrichment_disease=DOID:2531!3.49e-07!51;DOID:0060083!3.49e-07!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.46e-30!102;UBERON:0003061!1.46e-30!102;UBERON:0002193!1.43e-27!112;UBERON:0002371!1.03e-17!80;UBERON:0001474!4.25e-17!86;UBERON:0002384!2.32e-15!375;UBERON:0002405!5.57e-14!115;UBERON:0004765!2.27e-11!101;UBERON:0001434!2.27e-11!101;UBERON:0000178!3.37e-11!15;UBERON:0000179!3.37e-11!15;UBERON:0000463!3.37e-11!15;UBERON:0007023!2.90e-09!115;UBERON:0003081!1.09e-07!216|ontology_enrichment_uberon_v019=UBERON:0000178;6.37e-15;15!UBERON:0000179;6.37e-15;15!UBERON:0000463;6.37e-15;15!UBERON:0002390;1.11e-10;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-43,98;UBERON:0003061,1.28e-43,98;UBERON:0002193,8.28e-40,108;UBERON:0002405,1.69e-27,93;UBERON:0002371,2.45e-25,76;UBERON:0001474,4.31e-22,82;UBERON:0004765,1.72e-18,90;UBERON:0002384,1.35e-17,371;UBERON:0000178,6.67e-15,15;UBERON:0000179,6.67e-15,15;UBERON:0000463,6.67e-15,15;UBERON:0001434,6.98e-15,100;UBERON:0003081,1.66e-13,203;UBERON:0004177,2.84e-07,7;UBERON:0005057,2.84e-07,7|phase1_expression=0.54503513781167,0.214100523890983,0.563817616383885,0,0.446961094427288,0,0,0,0,0.491467873003018,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,32.3228706313834,33.4970404955779,30.4610723683939,19.6682138424452,39.9182574021101,13.7786349751308,0,0,0,12.3947520928483,9.95184627411951,0.587200878669695,4.9859586767869,12.8348446380891,10.8505435357926,2.23915474239924,7.12566065241755,3.09090681161024,2.76256653681173,7.55751887377619,6.54976965207104,3.48643555358527,8.22335776043652,6.81354015969228,2.01384674625505,6.91633907628572,4.96612682766029,1.72372840368309,5.80936215225443,4.06279459783025,4.89430082810772,5.18521685109907,4.49446968890169,3.06083892370903,8.34415470397843,7.03270838378945,10.8850929061616,11.9678194572979,24.294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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=50615 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6006 | |||
|TSSclassifier=S | |||
|UniProt=Q9HBE5 | |||
|association_with_transcript=41bp_to_NM_181078,NM_181079_5end | |||
|coexpression_cluster_id=C911 | |||
|description=CAGE_peak_2_at_IL21R_5end | |||
|id=chr16:27413524..27413547,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.85e-61!140;CL:0000988!2.91e-59!182;CL:0000037!6.19e-59!172;CL:0000566!6.19e-59!172;CL:0002032!1.55e-55!165;CL:0000837!1.55e-55!165;CL:0002087!2.13e-55!119;CL:0002031!6.17e-52!124;CL:0000542!1.39e-32!53;CL:0000051!1.39e-32!53;CL:0000838!4.75e-32!52;CL:0000763!1.96e-23!112;CL:0000049!1.96e-23!112;CL:0000766!2.01e-22!76;CL:0002009!1.70e-21!65;CL:0002194!2.29e-20!63;CL:0000576!2.29e-20!63;CL:0000040!2.29e-20!63;CL:0000559!2.29e-20!63;CL:0000557!3.88e-20!71;CL:0000839!4.61e-19!70;CL:0002057!1.01e-18!42;CL:0000134!3.66e-17!358;CL:0000860!2.88e-16!45;CL:0002320!3.20e-16!365;CL:0000084!1.76e-15!25;CL:0000827!1.76e-15!25;CL:0000945!3.16e-15!24;CL:0000826!3.16e-15!24;CL:0000791!2.60e-14!18;CL:0000789!2.60e-14!18;CL:0002420!2.60e-14!18;CL:0002419!2.60e-14!18;CL:0000790!2.60e-14!18;CL:0000219!4.68e-12!390;CL:0000048!2.05e-10!430;CL:0000723!1.67e-09!436;CL:0000625!2.49e-09!11;CL:0000034!3.34e-09!444;CL:0000236!4.52e-09!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.10e-23;53!CL:0002087;5.13e-20;104!CL:0000791;3.07e-19;18!CL:0000789;3.07e-19;18!CL:0002419;3.07e-19;18!CL:0000084;3.19e-19;25!CL:0000945;1.27e-18;24!CL:0000576;2.24e-16;48!CL:0000738;4.16e-16;136!CL:0000860;5.42e-15;33!CL:0002057;5.42e-15;33!CL:0000473;4.81e-14;39!CL:0000234;4.81e-14;39!CL:0000766;6.63e-13;69!CL:0000625;2.61e-12;11!CL:0000988;2.96e-11;177!CL:0000236;2.05e-09;13!CL:0000763;3.25e-08;100!CL:0000451;3.73e-08;10!CL:0000624;4.14e-08;6!CL:0000219;1.25e-07;193!CL:0000990;2.11e-07;8 | |||
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|ontology_enrichment_development_v019=CL:0000051;2.10e-23;53!CL:0000790;3.07e-19;18!CL:0002057;7.74e-17;42!CL:0000049;1.32e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!3.49e-07!51;DOID:0060083!3.49e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.46e-30!102;UBERON:0003061!1.46e-30!102;UBERON:0002193!1.43e-27!112;UBERON:0002371!1.03e-17!80;UBERON:0001474!4.25e-17!86;UBERON:0002384!2.32e-15!375;UBERON:0002405!5.57e-14!115;UBERON:0004765!2.27e-11!101;UBERON:0001434!2.27e-11!101;UBERON:0000178!3.37e-11!15;UBERON:0000179!3.37e-11!15;UBERON:0000463!3.37e-11!15;UBERON:0007023!2.90e-09!115;UBERON:0003081!1.09e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.37e-15;15!UBERON:0000179;6.37e-15;15!UBERON:0000463;6.37e-15;15!UBERON:0002390;1.11e-10;32 | |||
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| |||
|short_description=p2@IL21R | |||
}} |
Revision as of 09:51, 11 September 2013
Short description: | p2@IL21R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_IL21R_5end |
Coexpression cluster: | C911_cord_CD8_Natural_mycosis_Basophils_Peripheral_CD4 |
Association with transcript: | 41bp_to_NM_181078, NM_181079_5end |
EntrezGene: | IL21R |
HGNC: | 6006 |
UniProt: | Q9HBE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.28e-43 | 98 |
blood island | 1.28e-43 | 98 |
hemolymphoid system | 8.28e-40 | 108 |
immune system | 1.69e-27 | 93 |
bone marrow | 2.45e-25 | 76 |
bone element | 4.31e-22 | 82 |
skeletal element | 1.72e-18 | 90 |
connective tissue | 1.35e-17 | 371 |
blood | 6.67e-15 | 15 |
haemolymphatic fluid | 6.67e-15 | 15 |
organism substance | 6.67e-15 | 15 |
skeletal system | 6.98e-15 | 100 |
lateral plate mesoderm | 1.66e-13 | 203 |
hemopoietic organ | 2.84e-07 | 7 |
immune organ | 2.84e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.