FFCP PHASE1:Mm9::chr11:69414640..69414649,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=303|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:69414640..69414649,-|id=chr11:69414640..69414649,-|ontology_enrichment_celltype=CL:0002453!6.51e-08!8;CL:0000221!5.91e-07!44;CL:0000133!5.91e-07!44;CL:0002319!8.72e-07!43|ontology_enrichment_celltype_v019_2=CL:0002319,1.25e-14,43;CL:0000221,3.24e-14,44;CL:0000133,3.24e-14,44;CL:0002453,5.47e-13,8;CL:0000117,1.82e-11,23;CL:0000337,1.82e-11,23;CL:0000333,2.97e-10,10;CL:0000095,2.97e-10,10;CL:0000243,2.97e-10,10;CL:0000123,2.97e-10,10;CL:0000125,2.97e-10,10;CL:0000030,2.97e-10,10;CL:0000339,2.97e-10,10;CL:0002614,5.82e-10,3;CL:0002610,7.12e-10,3;CL:0000128,8.67e-08,6;CL:0000126,8.67e-08,6;CL:0000127,8.67e-08,6;CL:0002321,1.25e-07,70;CL:0000878,1.57e-07,2;CL:0000129,1.57e-07,2;CL:0000540,2.11e-07,33;CL:0000047,2.11e-07,33;CL:0000031,2.11e-07,33;CL:0000404,2.11e-07,33;CL:0002611,3.86e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.07e-19!71;UBERON:0003075!1.07e-19!71;UBERON:0007284!1.07e-19!71;UBERON:0001049!5.39e-18!52;UBERON:0005068!5.39e-18!52;UBERON:0006241!5.39e-18!52;UBERON:0007135!5.39e-18!52;UBERON:0000033!3.01e-17!63;UBERON:0004121!1.09e-16!102;UBERON:0000924!1.09e-16!102;UBERON:0006601!1.09e-16!102;UBERON:0001017!1.68e-16!73;UBERON:0005743!1.68e-16!73;UBERON:0002616!5.35e-16!49;UBERON:0000073!1.47e-15!75;UBERON:0001016!1.47e-15!75;UBERON:0000955!2.22e-15!50;UBERON:0006238!2.22e-15!50;UBERON:0003056!1.12e-12!49;UBERON:0002020!3.75e-12!34;UBERON:0003076!6.60e-11!12;UBERON:0003057!6.60e-11!12;UBERON:0007811!1.16e-09!86;UBERON:0003080!1.44e-09!40;UBERON:0002780!5.45e-09!39;UBERON:0001890!5.45e-09!39;UBERON:0006240!5.45e-09!39;UBERON:0002791!9.29e-09!29;UBERON:0003528!9.29e-09!29;UBERON:0001893!9.29e-09!29;UBERON:0000153!5.13e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.26e-28,73;UBERON:0001016,6.41e-27,75;UBERON:0000073,1.28e-25,54;UBERON:0003076,9.17e-23,12;UBERON:0003057,9.17e-23,12;UBERON:0004121,6.76e-22,95;UBERON:0000924,6.76e-22,95;UBERON:0006601,6.76e-22,95;UBERON:0001049,1.04e-21,52;UBERON:0005068,1.04e-21,52;UBERON:0006241,1.04e-21,52;UBERON:0007135,1.04e-21,52;UBERON:0002346,1.10e-18,64;UBERON:0003075,1.10e-18,64;UBERON:0007284,1.10e-18,64;UBERON:0010371,8.87e-16,73;UBERON:0002616,7.68e-14,46;UBERON:0000955,1.81e-13,47;UBERON:0006238,1.81e-13,47;UBERON:0002020,1.94e-13,34;UBERON:0002240,2.90e-12,6;UBERON:0005174,2.90e-12,6;UBERON:0001137,2.90e-12,6;UBERON:0002950,4.71e-12,4;UBERON:0001891,4.71e-12,4;UBERON:0009616,4.71e-12,4;UBERON:0010286,4.71e-12,4;UBERON:0004733,5.51e-12,6;UBERON:0004732,5.51e-12,6;UBERON:0002028,5.51e-12,6;UBERON:0007277,5.51e-12,6;UBERON:0010314,1.64e-11,92;UBERON:0002038,5.82e-10,3;UBERON:0009663,5.82e-10,3;UBERON:0009661,5.82e-10,3;UBERON:0000125,5.82e-10,3;UBERON:0002308,5.82e-10,3;UBERON:0004684,7.12e-10,3;UBERON:0002275,7.12e-10,3;UBERON:0001948,7.88e-10,5;UBERON:0002315,7.88e-10,5;UBERON:0003528,9.18e-08,29;UBERON:0002791,9.18e-08,29;UBERON:0001893,9.18e-08,29;UBERON:0003080,1.77e-07,40;UBERON:0000025,2.32e-07,114;UBERON:0002037,2.80e-07,4;UBERON:0002680,2.80e-07,4;UBERON:0001895,2.80e-07,4;UBERON:0010092,2.80e-07,4;UBERON:0006215,2.80e-07,4;UBERON:0002256,3.86e-07,2;UBERON:0003056,6.92e-07,49;UBERON:0011216,7.12e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0.699561878128147,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,0.65407546914134,0.659058548203415,1.94429899074283,1.39986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69240209984969,8.4528027170742,0.103689612308478,0.270011876663381,0,3.71346279724945,2.65042249141936,0,0.0958454710182364,0,3.30347642998166,3.31987079021488,3.07213066512487,0,0.548925861614458,0.52091337055676,2.79182999001381,3.37657566019008,3.66715794664344,2.35702868378934,2.27794689278565,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0.485300549842228,0.441683036920787,0.484875253135222,0,2.63502717310392,1.67557365450764,0,0,0,0,1.04853447583376,0,0.251308704225729,1.21677024134594,1.02286182932132,1.24672826735736,0.648965052271031,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.408218994907967,0.2562274405697,0.374806898238915,3.10444044886819,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0,0.32833492815819,0.243206428637567,0.292399974850665,0.439100230582101,0,0.841159794256509,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.40654023910644,0,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0.494910368917606,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,2.03967832211561,0.170870880797853,0,0.185194527369712,0.376736914009382,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0.56369293868419,0.299033092087958,0.330916980914195,0.388902376688095,0.258319646955462,0.506868376472335,1.64300134104056,0.5208175393758,0.629156066554265,0.483168241652012,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0.920650473014354,1.14579102687879,1.54667864109319,1.37016503954128,0,1.35004500046361,1.35096360967266,0.906284817968409,0.51776031175182,0,0,0.341467211508268,0,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0,0.256100609619477,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.532427418478012,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,0,0.309873682371932,0,0,0,0,0.191288332068843,0.441182838239031,0|short_description=p@chr11:69414640..69414649,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=303 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:69414640..69414649,- | |||
|id=chr11:69414640..69414649,- | |||
|ontology_enrichment_celltype=CL:0002453!6.51e-08!8;CL:0000221!5.91e-07!44;CL:0000133!5.91e-07!44;CL:0002319!8.72e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.25e-14,43;CL:0000221,3.24e-14,44;CL:0000133,3.24e-14,44;CL:0002453,5.47e-13,8;CL:0000117,1.82e-11,23;CL:0000337,1.82e-11,23;CL:0000333,2.97e-10,10;CL:0000095,2.97e-10,10;CL:0000243,2.97e-10,10;CL:0000123,2.97e-10,10;CL:0000125,2.97e-10,10;CL:0000030,2.97e-10,10;CL:0000339,2.97e-10,10;CL:0002614,5.82e-10,3;CL:0002610,7.12e-10,3;CL:0000128,8.67e-08,6;CL:0000126,8.67e-08,6;CL:0000127,8.67e-08,6;CL:0002321,1.25e-07,70;CL:0000878,1.57e-07,2;CL:0000129,1.57e-07,2;CL:0000540,2.11e-07,33;CL:0000047,2.11e-07,33;CL:0000031,2.11e-07,33;CL:0000404,2.11e-07,33;CL:0002611,3.86e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.07e-19!71;UBERON:0003075!1.07e-19!71;UBERON:0007284!1.07e-19!71;UBERON:0001049!5.39e-18!52;UBERON:0005068!5.39e-18!52;UBERON:0006241!5.39e-18!52;UBERON:0007135!5.39e-18!52;UBERON:0000033!3.01e-17!63;UBERON:0004121!1.09e-16!102;UBERON:0000924!1.09e-16!102;UBERON:0006601!1.09e-16!102;UBERON:0001017!1.68e-16!73;UBERON:0005743!1.68e-16!73;UBERON:0002616!5.35e-16!49;UBERON:0000073!1.47e-15!75;UBERON:0001016!1.47e-15!75;UBERON:0000955!2.22e-15!50;UBERON:0006238!2.22e-15!50;UBERON:0003056!1.12e-12!49;UBERON:0002020!3.75e-12!34;UBERON:0003076!6.60e-11!12;UBERON:0003057!6.60e-11!12;UBERON:0007811!1.16e-09!86;UBERON:0003080!1.44e-09!40;UBERON:0002780!5.45e-09!39;UBERON:0001890!5.45e-09!39;UBERON:0006240!5.45e-09!39;UBERON:0002791!9.29e-09!29;UBERON:0003528!9.29e-09!29;UBERON:0001893!9.29e-09!29;UBERON:0000153!5.13e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.26e-28,73;UBERON:0001016,6.41e-27,75;UBERON:0000073,1.28e-25,54;UBERON:0003076,9.17e-23,12;UBERON:0003057,9.17e-23,12;UBERON:0004121,6.76e-22,95;UBERON:0000924,6.76e-22,95;UBERON:0006601,6.76e-22,95;UBERON:0001049,1.04e-21,52;UBERON:0005068,1.04e-21,52;UBERON:0006241,1.04e-21,52;UBERON:0007135,1.04e-21,52;UBERON:0002346,1.10e-18,64;UBERON:0003075,1.10e-18,64;UBERON:0007284,1.10e-18,64;UBERON:0010371,8.87e-16,73;UBERON:0002616,7.68e-14,46;UBERON:0000955,1.81e-13,47;UBERON:0006238,1.81e-13,47;UBERON:0002020,1.94e-13,34;UBERON:0002240,2.90e-12,6;UBERON:0005174,2.90e-12,6;UBERON:0001137,2.90e-12,6;UBERON:0002950,4.71e-12,4;UBERON:0001891,4.71e-12,4;UBERON:0009616,4.71e-12,4;UBERON:0010286,4.71e-12,4;UBERON:0004733,5.51e-12,6;UBERON:0004732,5.51e-12,6;UBERON:0002028,5.51e-12,6;UBERON:0007277,5.51e-12,6;UBERON:0010314,1.64e-11,92;UBERON:0002038,5.82e-10,3;UBERON:0009663,5.82e-10,3;UBERON:0009661,5.82e-10,3;UBERON:0000125,5.82e-10,3;UBERON:0002308,5.82e-10,3;UBERON:0004684,7.12e-10,3;UBERON:0002275,7.12e-10,3;UBERON:0001948,7.88e-10,5;UBERON:0002315,7.88e-10,5;UBERON:0003528,9.18e-08,29;UBERON:0002791,9.18e-08,29;UBERON:0001893,9.18e-08,29;UBERON:0003080,1.77e-07,40;UBERON:0000025,2.32e-07,114;UBERON:0002037,2.80e-07,4;UBERON:0002680,2.80e-07,4;UBERON:0001895,2.80e-07,4;UBERON:0010092,2.80e-07,4;UBERON:0006215,2.80e-07,4;UBERON:0002256,3.86e-07,2;UBERON:0003056,6.92e-07,49;UBERON:0011216,7.12e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0.699561878128147,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,0.65407546914134,0.659058548203415,1.94429899074283,1.39986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69240209984969,8.4528027170742,0.103689612308478,0.270011876663381,0,3.71346279724945,2.65042249141936,0,0.0958454710182364,0,3.30347642998166,3.31987079021488,3.07213066512487,0,0.548925861614458,0.52091337055676,2.79182999001381,3.37657566019008,3.66715794664344,2.35702868378934,2.27794689278565,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0.485300549842228,0.441683036920787,0.484875253135222,0,2.63502717310392,1.67557365450764,0,0,0,0,1.04853447583376,0,0.251308704225729,1.21677024134594,1.02286182932132,1.24672826735736,0.648965052271031,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.408218994907967,0.2562274405697,0.374806898238915,3.10444044886819,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0,0.32833492815819,0.243206428637567,0.292399974850665,0.439100230582101,0,0.841159794256509,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.40654023910644,0,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0.494910368917606,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,2.03967832211561,0.170870880797853,0,0.185194527369712,0.376736914009382,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0.56369293868419,0.299033092087958,0.330916980914195,0.388902376688095,0.258319646955462,0.506868376472335,1.64300134104056,0.5208175393758,0.629156066554265,0.483168241652012,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0.920650473014354,1.14579102687879,1.54667864109319,1.37016503954128,0,1.35004500046361,1.35096360967266,0.906284817968409,0.51776031175182,0,0,0.341467211508268,0,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0,0.256100609619477,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.532427418478012,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,0,0.309873682371932,0,0,0,0,0.191288332068843,0.441182838239031,0 | |||
|short_description=p@chr11:69414640..69414649,- | |||
}} |
Revision as of 20:37, 12 September 2013
Short description: | p@chr11:69414640..69414649, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69414640..69414649, - |
Coexpression cluster: | MCL_coexpression_mm9:303 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.25e-14 | 43 |
ectodermal cell | 3.24e-14 | 44 |
neurectodermal cell | 3.24e-14 | 44 |
oligodendrocyte precursor cell | 5.47e-13 | 8 |
CNS neuron (sensu Vertebrata) | 1.82e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.82e-11 | 23 |
migratory neural crest cell | 2.97e-10 | 10 |
neuron associated cell | 2.97e-10 | 10 |
glial cell (sensu Vertebrata) | 2.97e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 2.97e-10 | 10 |
glial cell | 2.97e-10 | 10 |
glioblast | 2.97e-10 | 10 |
glioblast (sensu Vertebrata) | 2.97e-10 | 10 |
neuron of the substantia nigra | 5.82e-10 | 3 |
raphe nuclei neuron | 7.12e-10 | 3 |
oligodendrocyte | 8.67e-08 | 6 |
macroglial cell | 8.67e-08 | 6 |
astrocyte | 8.67e-08 | 6 |
embryonic cell | 1.25e-07 | 70 |
central nervous system macrophage | 1.57e-07 | 2 |
microglial cell | 1.57e-07 | 2 |
neuron | 2.11e-07 | 33 |
neuronal stem cell | 2.11e-07 | 33 |
neuroblast | 2.11e-07 | 33 |
electrically signaling cell | 2.11e-07 | 33 |
neuron of the dorsal spinal cord | 3.86e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.