FFCP PHASE1:Mm9::chr11:71564484..71564497,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=216881|HGNC=|UniProt=Q80XH4|association_with_transcript=2bp_to_ENSMUST00000108511,uc007jxw.1_5end|description=CAGE_peak_2_at_Wscd1_5end|id=chr11:71564484..71564497,+|ontology_enrichment_celltype=CL:0000117!1.86e-14!23;CL:0000337!1.86e-14!23;CL:0002319!2.34e-11!43;CL:0000221!4.62e-11!44;CL:0000133!4.62e-11!44;CL:0000540!2.35e-09!33;CL:0000047!2.35e-09!33;CL:0000031!2.35e-09!33;CL:0000404!2.35e-09!33;CL:0000055!4.50e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-18,23;CL:0000337,1.25e-18,23;CL:0002319,5.25e-12,43;CL:0000221,1.82e-11,44;CL:0000133,1.82e-11,44;CL:0000540,5.34e-10,33;CL:0000047,5.34e-10,33;CL:0000031,5.34e-10,33;CL:0000404,5.34e-10,33;CL:0000393,3.94e-07,39;CL:0000211,3.94e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.71e-27!73;UBERON:0005743!3.71e-27!73;UBERON:0000073!6.60e-27!75;UBERON:0001016!6.60e-27!75;UBERON:0002346!9.26e-26!71;UBERON:0003075!9.26e-26!71;UBERON:0007284!9.26e-26!71;UBERON:0001049!6.47e-25!52;UBERON:0005068!6.47e-25!52;UBERON:0006241!6.47e-25!52;UBERON:0007135!6.47e-25!52;UBERON:0004121!2.34e-24!102;UBERON:0000924!2.34e-24!102;UBERON:0006601!2.34e-24!102;UBERON:0000033!2.37e-23!63;UBERON:0000955!2.73e-23!50;UBERON:0006238!2.73e-23!50;UBERON:0002616!9.03e-23!49;UBERON:0003056!1.80e-20!49;UBERON:0007811!3.39e-20!86;UBERON:0003080!2.01e-18!40;UBERON:0002780!9.50e-18!39;UBERON:0001890!9.50e-18!39;UBERON:0006240!9.50e-18!39;UBERON:0002020!1.02e-17!34;UBERON:0000153!1.96e-16!94;UBERON:0002791!2.10e-14!29;UBERON:0003528!2.10e-14!29;UBERON:0001893!2.10e-14!29;UBERON:0000025!1.08e-10!114;UBERON:0000956!7.52e-10!21;UBERON:0001869!7.52e-10!21;UBERON:0000203!7.52e-10!21;UBERON:0004111!4.26e-09!122;UBERON:0000468!1.85e-08!333;UBERON:0002619!6.88e-08!17;UBERON:0000475!1.60e-07!200;UBERON:0000483!3.79e-07!181;UBERON:0003076!4.55e-07!12;UBERON:0003057!4.55e-07!12;UBERON:0000477!5.76e-07!154;UBERON:0000119!6.20e-07!183|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.52e-35,54;UBERON:0001017,1.99e-33,73;UBERON:0001049,5.25e-33,52;UBERON:0005068,5.25e-33,52;UBERON:0006241,5.25e-33,52;UBERON:0007135,5.25e-33,52;UBERON:0002346,5.69e-33,64;UBERON:0003075,5.69e-33,64;UBERON:0007284,5.69e-33,64;UBERON:0001016,7.62e-32,75;UBERON:0000955,4.91e-28,47;UBERON:0006238,4.91e-28,47;UBERON:0004121,5.94e-28,95;UBERON:0000924,5.94e-28,95;UBERON:0006601,5.94e-28,95;UBERON:0002616,2.33e-27,46;UBERON:0003056,1.97e-26,49;UBERON:0010371,5.76e-26,73;UBERON:0010314,2.14e-24,92;UBERON:0003080,6.89e-24,40;UBERON:0002780,5.42e-23,39;UBERON:0001890,5.42e-23,39;UBERON:0006240,5.42e-23,39;UBERON:0002020,5.99e-23,34;UBERON:0003528,1.47e-18,29;UBERON:0002791,1.47e-18,29;UBERON:0001893,1.47e-18,29;UBERON:0000025,2.74e-15,114;UBERON:0004111,9.20e-13,122;UBERON:0000956,1.57e-12,21;UBERON:0001869,1.57e-12,21;UBERON:0000203,1.57e-12,21;UBERON:0000483,7.75e-12,174;UBERON:0000119,2.18e-11,176;UBERON:0002619,6.14e-10,17;UBERON:0003076,2.38e-09,12;UBERON:0003057,2.38e-09,12;UBERON:0011216,1.39e-08,194;UBERON:0002420,2.52e-07,8;UBERON:0007245,2.52e-07,8;UBERON:0010009,2.52e-07,8;UBERON:0010011,2.52e-07,8;UBERON:0000454,2.52e-07,8|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,3.70642765846759,2.19686182734472,2.72201858703997,2.79972843250725,7.18762821824858,0,0,0,0,0,0,9.1042407386819,6.87688273053643,10.1413024560989,0.677689064138264,0,0,0,0,2.39680088414724,7.68436610643109,4.25127410464758,3.51015439662396,5.46844899513593,10.2834354385369,9.718215801871,2.9397791811589,2.97120960156533,1.83843757322004,8.8092704799511,5.87361755191863,9.21639199537461,6.19865552331911,6.95306091378313,5.73004707612436,6.42120897703176,6.19038871034848,7.33431589328689,8.83885756421003,5.83723891276322,5.21918448310842,0.605809546665472,0.68014404096107,3.76823835312181,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.79928715803342,0,0.29688427812965,1.21439728736295,0.608930956624282,1.38369298353635,0.452167921657868,1.29347577849275,1.0053327306374,0.247194967734374,0.289198713839823,0,1.13236794963186,0.662524555381181,0,0,6.44117753425404,9.00620839297857,0.255457055208591,0,0,0,7.9389038884556,5.94750783664214,3.39266750704734,4.17178368461463,2.30143911597297,8.3115217823824,7.94982189032012,0.305518091550949,0.497627882440372,0.252722758433675,0.210441855886474,1.30120442962704,1.83921683546778,1.80062129805349,1.05493372485001,3.53789795586905,4.35586648968489,3.65436725782942,2.32833033665114,0.431135985865684,0,0.175951124163949,0,0.834141747676794,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0.900310307305074,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,1.3413670069981,1.05088808130453,0.822799249567402,1.64167464079095,1.29710095273369,1.60819986167866,1.53685080703735,2.41571553768669,6.72927835405207,5.86556290561921,0,0.528901133327089,0.426576501070468,0.696710015581316,0.257734922644187,1.21010114774006,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.596869416123452,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.913988100877831,2.25415471346161,1.4255592949172,3.10323979468201,1.96380295692892,2.21327879934901,1.47610147979602,2.19798218977925,0.987177311374404,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0,0,0,0.744281895337007,0.312037673114561,0,0,0,3.14080423283228,0,0.488894929326078,0.509235257325564,1.17345124144251,1.00503754465089,0.952174563544055,2.53673742215138,2.83743259391144,3.5434350343804,2.39182152986231,4.91589944147214,2.76295970985433,3.47157740595628,0,0,0,0.275936746304732,9.31193421929193,9.37693492737625,0,0.757412781613119,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0,0.283076530788832,0.404810701674894,0,0.395287777946524,3.53453448063988,0.141940085208269,0.35613120733451,0.81443479676788,0.659880491890142,0,0.242780636154981,0.906970670894253,0.188605079755898,0.590603785761546,0.614870295887855,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,2.04263763452273,1.98067203434441,2.71653235943784,3.42939256050548,1.59606210278046,2.49716344642899,1.15184314421485,1.2178597964584,0.23467170806371,0.63549621259146,0,0.65954501176592,0.322928853391811,0.180938774784468,0,0,0.582961673259701,8.34413859047294,0,0.619160603889667,0,0,0.136694227721025,0,0,0,0,0,0.632671987162271,0.203319467126849,0.324016022465404,0,0,0.134864346384821,0.41326727862668,0.26175594198403,0,0,0,0.149516546043979,0.330916980914195,0.583353565032143,0.387479470433193,0.844780627453891,0.234714477291508,0.2604087696879,0.209718688851422,0,0,0.948033361884535,6.48720688928525,3.3894615864393,1.68897069871134,2.32734704367726,0.993406773906324,2.64429988943931,1.9199638532695,1.21159739937777,1.98137697303,1.81487133246313,1.65678397257579,1.73181314952593,1.63627663054197,0.226730383615211,0.221985953374065,0.179427713218951,0,0.19318959403219,0.187682475451182,0.549454872801795,0,0.501572104035363,3.95326289831947,4.14292712856459,3.43737308063638,4.81188910562325,2.74033007908257,2.2661816921691,3.37511250115903,3.60256962579376,3.17199686288943,1.03552062350364,0.830298780673413,1.19707462020309,1.70733605754134,1.45864030240976,1.46729213839588,0.183843508450014,1.11123363900808,1.64828045791115,1.28367683836726,1.51618327058278,1.01391719956096,0.754505365544305,0.842773567228942,1.60062881012173,0.689225627467359,1.42888107384922,1.0429589335037,1.73618298417335,0.412085900803307,0.294397840268795,1.02860775715625,0.354951612318675,0.953744759789284,0.581385666529314,1.12931256498397,1.52306294205018,1.46342378298218,0.526139422875686,0.679020569229309,0.561142271657738,1.30498519936592,0.788035859004508,1.22769312950907,1.23949472948773,0.771626443924566,2.24829520144151,0.935726433781634,0.859484216193193,0.765153328275374,0.661774257358546,0.695603506861264|short_description=p2@Wscd1}} | ||
|EntrezGene=216881 | |||
|HGNC= | |||
|UniProt=Q80XH4 | |||
|association_with_transcript=2bp_to_ENSMUST00000108511,uc007jxw.1_5end | |||
|description=CAGE_peak_2_at_Wscd1_5end | |||
|id=chr11:71564484..71564497,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.86e-14!23;CL:0000337!1.86e-14!23;CL:0002319!2.34e-11!43;CL:0000221!4.62e-11!44;CL:0000133!4.62e-11!44;CL:0000540!2.35e-09!33;CL:0000047!2.35e-09!33;CL:0000031!2.35e-09!33;CL:0000404!2.35e-09!33;CL:0000055!4.50e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-18,23;CL:0000337,1.25e-18,23;CL:0002319,5.25e-12,43;CL:0000221,1.82e-11,44;CL:0000133,1.82e-11,44;CL:0000540,5.34e-10,33;CL:0000047,5.34e-10,33;CL:0000031,5.34e-10,33;CL:0000404,5.34e-10,33;CL:0000393,3.94e-07,39;CL:0000211,3.94e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.71e-27!73;UBERON:0005743!3.71e-27!73;UBERON:0000073!6.60e-27!75;UBERON:0001016!6.60e-27!75;UBERON:0002346!9.26e-26!71;UBERON:0003075!9.26e-26!71;UBERON:0007284!9.26e-26!71;UBERON:0001049!6.47e-25!52;UBERON:0005068!6.47e-25!52;UBERON:0006241!6.47e-25!52;UBERON:0007135!6.47e-25!52;UBERON:0004121!2.34e-24!102;UBERON:0000924!2.34e-24!102;UBERON:0006601!2.34e-24!102;UBERON:0000033!2.37e-23!63;UBERON:0000955!2.73e-23!50;UBERON:0006238!2.73e-23!50;UBERON:0002616!9.03e-23!49;UBERON:0003056!1.80e-20!49;UBERON:0007811!3.39e-20!86;UBERON:0003080!2.01e-18!40;UBERON:0002780!9.50e-18!39;UBERON:0001890!9.50e-18!39;UBERON:0006240!9.50e-18!39;UBERON:0002020!1.02e-17!34;UBERON:0000153!1.96e-16!94;UBERON:0002791!2.10e-14!29;UBERON:0003528!2.10e-14!29;UBERON:0001893!2.10e-14!29;UBERON:0000025!1.08e-10!114;UBERON:0000956!7.52e-10!21;UBERON:0001869!7.52e-10!21;UBERON:0000203!7.52e-10!21;UBERON:0004111!4.26e-09!122;UBERON:0000468!1.85e-08!333;UBERON:0002619!6.88e-08!17;UBERON:0000475!1.60e-07!200;UBERON:0000483!3.79e-07!181;UBERON:0003076!4.55e-07!12;UBERON:0003057!4.55e-07!12;UBERON:0000477!5.76e-07!154;UBERON:0000119!6.20e-07!183 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.52e-35,54;UBERON:0001017,1.99e-33,73;UBERON:0001049,5.25e-33,52;UBERON:0005068,5.25e-33,52;UBERON:0006241,5.25e-33,52;UBERON:0007135,5.25e-33,52;UBERON:0002346,5.69e-33,64;UBERON:0003075,5.69e-33,64;UBERON:0007284,5.69e-33,64;UBERON:0001016,7.62e-32,75;UBERON:0000955,4.91e-28,47;UBERON:0006238,4.91e-28,47;UBERON:0004121,5.94e-28,95;UBERON:0000924,5.94e-28,95;UBERON:0006601,5.94e-28,95;UBERON:0002616,2.33e-27,46;UBERON:0003056,1.97e-26,49;UBERON:0010371,5.76e-26,73;UBERON:0010314,2.14e-24,92;UBERON:0003080,6.89e-24,40;UBERON:0002780,5.42e-23,39;UBERON:0001890,5.42e-23,39;UBERON:0006240,5.42e-23,39;UBERON:0002020,5.99e-23,34;UBERON:0003528,1.47e-18,29;UBERON:0002791,1.47e-18,29;UBERON:0001893,1.47e-18,29;UBERON:0000025,2.74e-15,114;UBERON:0004111,9.20e-13,122;UBERON:0000956,1.57e-12,21;UBERON:0001869,1.57e-12,21;UBERON:0000203,1.57e-12,21;UBERON:0000483,7.75e-12,174;UBERON:0000119,2.18e-11,176;UBERON:0002619,6.14e-10,17;UBERON:0003076,2.38e-09,12;UBERON:0003057,2.38e-09,12;UBERON:0011216,1.39e-08,194;UBERON:0002420,2.52e-07,8;UBERON:0007245,2.52e-07,8;UBERON:0010009,2.52e-07,8;UBERON:0010011,2.52e-07,8;UBERON:0000454,2.52e-07,8 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,3.70642765846759,2.19686182734472,2.72201858703997,2.79972843250725,7.18762821824858,0,0,0,0,0,0,9.1042407386819,6.87688273053643,10.1413024560989,0.677689064138264,0,0,0,0,2.39680088414724,7.68436610643109,4.25127410464758,3.51015439662396,5.46844899513593,10.2834354385369,9.718215801871,2.9397791811589,2.97120960156533,1.83843757322004,8.8092704799511,5.87361755191863,9.21639199537461,6.19865552331911,6.95306091378313,5.73004707612436,6.42120897703176,6.19038871034848,7.33431589328689,8.83885756421003,5.83723891276322,5.21918448310842,0.605809546665472,0.68014404096107,3.76823835312181,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.79928715803342,0,0.29688427812965,1.21439728736295,0.608930956624282,1.38369298353635,0.452167921657868,1.29347577849275,1.0053327306374,0.247194967734374,0.289198713839823,0,1.13236794963186,0.662524555381181,0,0,6.44117753425404,9.00620839297857,0.255457055208591,0,0,0,7.9389038884556,5.94750783664214,3.39266750704734,4.17178368461463,2.30143911597297,8.3115217823824,7.94982189032012,0.305518091550949,0.497627882440372,0.252722758433675,0.210441855886474,1.30120442962704,1.83921683546778,1.80062129805349,1.05493372485001,3.53789795586905,4.35586648968489,3.65436725782942,2.32833033665114,0.431135985865684,0,0.175951124163949,0,0.834141747676794,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0.900310307305074,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,1.3413670069981,1.05088808130453,0.822799249567402,1.64167464079095,1.29710095273369,1.60819986167866,1.53685080703735,2.41571553768669,6.72927835405207,5.86556290561921,0,0.528901133327089,0.426576501070468,0.696710015581316,0.257734922644187,1.21010114774006,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.596869416123452,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.913988100877831,2.25415471346161,1.4255592949172,3.10323979468201,1.96380295692892,2.21327879934901,1.47610147979602,2.19798218977925,0.987177311374404,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0,0,0,0.744281895337007,0.312037673114561,0,0,0,3.14080423283228,0,0.488894929326078,0.509235257325564,1.17345124144251,1.00503754465089,0.952174563544055,2.53673742215138,2.83743259391144,3.5434350343804,2.39182152986231,4.91589944147214,2.76295970985433,3.47157740595628,0,0,0,0.275936746304732,9.31193421929193,9.37693492737625,0,0.757412781613119,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0,0.283076530788832,0.404810701674894,0,0.395287777946524,3.53453448063988,0.141940085208269,0.35613120733451,0.81443479676788,0.659880491890142,0,0.242780636154981,0.906970670894253,0.188605079755898,0.590603785761546,0.614870295887855,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,2.04263763452273,1.98067203434441,2.71653235943784,3.42939256050548,1.59606210278046,2.49716344642899,1.15184314421485,1.2178597964584,0.23467170806371,0.63549621259146,0,0.65954501176592,0.322928853391811,0.180938774784468,0,0,0.582961673259701,8.34413859047294,0,0.619160603889667,0,0,0.136694227721025,0,0,0,0,0,0.632671987162271,0.203319467126849,0.324016022465404,0,0,0.134864346384821,0.41326727862668,0.26175594198403,0,0,0,0.149516546043979,0.330916980914195,0.583353565032143,0.387479470433193,0.844780627453891,0.234714477291508,0.2604087696879,0.209718688851422,0,0,0.948033361884535,6.48720688928525,3.3894615864393,1.68897069871134,2.32734704367726,0.993406773906324,2.64429988943931,1.9199638532695,1.21159739937777,1.98137697303,1.81487133246313,1.65678397257579,1.73181314952593,1.63627663054197,0.226730383615211,0.221985953374065,0.179427713218951,0,0.19318959403219,0.187682475451182,0.549454872801795,0,0.501572104035363,3.95326289831947,4.14292712856459,3.43737308063638,4.81188910562325,2.74033007908257,2.2661816921691,3.37511250115903,3.60256962579376,3.17199686288943,1.03552062350364,0.830298780673413,1.19707462020309,1.70733605754134,1.45864030240976,1.46729213839588,0.183843508450014,1.11123363900808,1.64828045791115,1.28367683836726,1.51618327058278,1.01391719956096,0.754505365544305,0.842773567228942,1.60062881012173,0.689225627467359,1.42888107384922,1.0429589335037,1.73618298417335,0.412085900803307,0.294397840268795,1.02860775715625,0.354951612318675,0.953744759789284,0.581385666529314,1.12931256498397,1.52306294205018,1.46342378298218,0.526139422875686,0.679020569229309,0.561142271657738,1.30498519936592,0.788035859004508,1.22769312950907,1.23949472948773,0.771626443924566,2.24829520144151,0.935726433781634,0.859484216193193,0.765153328275374,0.661774257358546,0.695603506861264 | |||
|short_description=p2@Wscd1 | |||
}} |
Revision as of 20:48, 12 September 2013
Short description: | p2@Wscd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Wscd1_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENSMUST00000108511, uc007jxw.1_5end |
EntrezGene: | Wscd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.25e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.25e-18 | 23 |
neural cell | 5.25e-12 | 43 |
ectodermal cell | 1.82e-11 | 44 |
neurectodermal cell | 1.82e-11 | 44 |
neuron | 5.34e-10 | 33 |
neuronal stem cell | 5.34e-10 | 33 |
neuroblast | 5.34e-10 | 33 |
electrically signaling cell | 5.34e-10 | 33 |
electrically responsive cell | 3.94e-07 | 39 |
electrically active cell | 3.94e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.