FFCP PHASE1:Mm9::chr15:41278965..41278977,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=170719|HGNC=|MCL_coexpression_id=1|UniProt=Q4KMM3|association_with_transcript=-50bp_to_ENSMUST00000090096,ENSMUST00000110297,NM_001130166,uc007vot.2_5end|description=CAGE_peak_12_at_Oxr1_5end|id=chr15:41278965..41278977,+|ontology_enrichment_celltype=CL:0000540!5.41e-07!33;CL:0000047!5.41e-07!33;CL:0000031!5.41e-07!33;CL:0000404!5.41e-07!33|ontology_enrichment_celltype_v019_2=CL:0000540,1.21e-07,33;CL:0000047,1.21e-07,33;CL:0000031,1.21e-07,33;CL:0000404,1.21e-07,33;CL:0002319,4.85e-07,43;CL:0000393,5.78e-07,39;CL:0000211,5.78e-07,39;CL:0002610,7.59e-07,3;CL:0000221,8.44e-07,44;CL:0000133,8.44e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.50e-20!75;UBERON:0001016!4.50e-20!75;UBERON:0001017!3.89e-19!73;UBERON:0005743!3.89e-19!73;UBERON:0004121!2.93e-16!102;UBERON:0000924!2.93e-16!102;UBERON:0006601!2.93e-16!102;UBERON:0002346!8.14e-16!71;UBERON:0003075!8.14e-16!71;UBERON:0007284!8.14e-16!71;UBERON:0001049!1.66e-13!52;UBERON:0005068!1.66e-13!52;UBERON:0006241!1.66e-13!52;UBERON:0007135!1.66e-13!52;UBERON:0000955!1.99e-13!50;UBERON:0006238!1.99e-13!50;UBERON:0002616!8.89e-13!49;UBERON:0000033!6.61e-11!63;UBERON:0002020!9.01e-10!34;UBERON:0003080!1.87e-09!40;UBERON:0002780!6.28e-09!39;UBERON:0001890!6.28e-09!39;UBERON:0006240!6.28e-09!39;UBERON:0003056!2.22e-08!49;UBERON:0002021!3.11e-08!10;UBERON:0000411!3.11e-08!10;UBERON:0001950!3.11e-08!10;UBERON:0002791!6.52e-08!29;UBERON:0003528!6.52e-08!29;UBERON:0001893!6.52e-08!29;UBERON:0002619!9.35e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.82e-29,75;UBERON:0001017,3.71e-28,73;UBERON:0000073,5.23e-24,54;UBERON:0001049,4.18e-21,52;UBERON:0005068,4.18e-21,52;UBERON:0006241,4.18e-21,52;UBERON:0007135,4.18e-21,52;UBERON:0004121,7.27e-21,95;UBERON:0000924,7.27e-21,95;UBERON:0006601,7.27e-21,95;UBERON:0002021,2.55e-19,10;UBERON:0000411,2.55e-19,10;UBERON:0001950,2.55e-19,10;UBERON:0000955,6.18e-19,47;UBERON:0006238,6.18e-19,47;UBERON:0002346,1.24e-18,64;UBERON:0003075,1.24e-18,64;UBERON:0007284,1.24e-18,64;UBERON:0002616,1.59e-17,46;UBERON:0002020,1.81e-16,34;UBERON:0010371,2.15e-15,73;UBERON:0003528,2.55e-14,29;UBERON:0002791,2.55e-14,29;UBERON:0001893,2.55e-14,29;UBERON:0003080,1.28e-13,40;UBERON:0010314,1.44e-13,92;UBERON:0002619,1.18e-12,17;UBERON:0002780,1.77e-12,39;UBERON:0001890,1.77e-12,39;UBERON:0006240,1.77e-12,39;UBERON:0000956,7.88e-12,21;UBERON:0001869,7.88e-12,21;UBERON:0000203,7.88e-12,21;UBERON:0003056,3.40e-10,49;UBERON:0003076,1.36e-08,12;UBERON:0003057,1.36e-08,12;UBERON:0002950,3.20e-08,4;UBERON:0001891,3.20e-08,4;UBERON:0009616,3.20e-08,4;UBERON:0010286,3.20e-08,4;UBERON:0000025,5.98e-08,114;UBERON:0011216,2.57e-07,194;UBERON:0004111,5.89e-07,122;UBERON:0004684,7.59e-07,3;UBERON:0002275,7.59e-07,3|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,1.17646297606203,0,0,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,1.28629718017973,0,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0,0.270011876663381,0,0.285650984403804,1.10434270475807,0.244981598429908,0.0958454710182364,0,4.40463523997555,4.59674417106676,3.07213066512487,0.395658863190582,0.274462930807229,0,2.79182999001381,2.8138130501584,4.12555268997387,1.76777151284201,1.56608848879013,0.745597783301202,0.454357159999104,1.96486056277642,2.02905142091174,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.506719730950197,0.505524445014783,0.11418387971906,0.776813650941515,1.03909497345377,0.173485326766136,0.304465478312141,0.922461989024234,0.452167921657868,0.940709657085638,1.25666591329675,0,0.289198713839823,1.76922110389975,0.323533699894818,0,0,0,4.68449275218475,2.72280718857492,0,0.239630249011841,0,0,2.39665023047716,1.37250180845588,0.502617408451458,5.56237824615285,5.11430914660661,2.90903262383384,1.94689515681309,0,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0.43839146485515,0.556094498451196,0,0,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.329119699826961,0.32833492815819,0.162137619091711,0.877199924551994,0.878200461164203,0.671032093801859,3.99550902271842,0.411618449517138,0,0,0,0.464473343720877,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0,0.350679099451593,0.632365371242573,0.442830443938806,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0.486405680325106,0.274561413188081,1.43768206527355,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.4429293792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| ||
|EntrezGene=170719 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q4KMM3 | |||
|association_with_transcript=-50bp_to_ENSMUST00000090096,ENSMUST00000110297,NM_001130166,uc007vot.2_5end | |||
|description=CAGE_peak_12_at_Oxr1_5end | |||
|id=chr15:41278965..41278977,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.41e-07!33;CL:0000047!5.41e-07!33;CL:0000031!5.41e-07!33;CL:0000404!5.41e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.21e-07,33;CL:0000047,1.21e-07,33;CL:0000031,1.21e-07,33;CL:0000404,1.21e-07,33;CL:0002319,4.85e-07,43;CL:0000393,5.78e-07,39;CL:0000211,5.78e-07,39;CL:0002610,7.59e-07,3;CL:0000221,8.44e-07,44;CL:0000133,8.44e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.50e-20!75;UBERON:0001016!4.50e-20!75;UBERON:0001017!3.89e-19!73;UBERON:0005743!3.89e-19!73;UBERON:0004121!2.93e-16!102;UBERON:0000924!2.93e-16!102;UBERON:0006601!2.93e-16!102;UBERON:0002346!8.14e-16!71;UBERON:0003075!8.14e-16!71;UBERON:0007284!8.14e-16!71;UBERON:0001049!1.66e-13!52;UBERON:0005068!1.66e-13!52;UBERON:0006241!1.66e-13!52;UBERON:0007135!1.66e-13!52;UBERON:0000955!1.99e-13!50;UBERON:0006238!1.99e-13!50;UBERON:0002616!8.89e-13!49;UBERON:0000033!6.61e-11!63;UBERON:0002020!9.01e-10!34;UBERON:0003080!1.87e-09!40;UBERON:0002780!6.28e-09!39;UBERON:0001890!6.28e-09!39;UBERON:0006240!6.28e-09!39;UBERON:0003056!2.22e-08!49;UBERON:0002021!3.11e-08!10;UBERON:0000411!3.11e-08!10;UBERON:0001950!3.11e-08!10;UBERON:0002791!6.52e-08!29;UBERON:0003528!6.52e-08!29;UBERON:0001893!6.52e-08!29;UBERON:0002619!9.35e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.82e-29,75;UBERON:0001017,3.71e-28,73;UBERON:0000073,5.23e-24,54;UBERON:0001049,4.18e-21,52;UBERON:0005068,4.18e-21,52;UBERON:0006241,4.18e-21,52;UBERON:0007135,4.18e-21,52;UBERON:0004121,7.27e-21,95;UBERON:0000924,7.27e-21,95;UBERON:0006601,7.27e-21,95;UBERON:0002021,2.55e-19,10;UBERON:0000411,2.55e-19,10;UBERON:0001950,2.55e-19,10;UBERON:0000955,6.18e-19,47;UBERON:0006238,6.18e-19,47;UBERON:0002346,1.24e-18,64;UBERON:0003075,1.24e-18,64;UBERON:0007284,1.24e-18,64;UBERON:0002616,1.59e-17,46;UBERON:0002020,1.81e-16,34;UBERON:0010371,2.15e-15,73;UBERON:0003528,2.55e-14,29;UBERON:0002791,2.55e-14,29;UBERON:0001893,2.55e-14,29;UBERON:0003080,1.28e-13,40;UBERON:0010314,1.44e-13,92;UBERON:0002619,1.18e-12,17;UBERON:0002780,1.77e-12,39;UBERON:0001890,1.77e-12,39;UBERON:0006240,1.77e-12,39;UBERON:0000956,7.88e-12,21;UBERON:0001869,7.88e-12,21;UBERON:0000203,7.88e-12,21;UBERON:0003056,3.40e-10,49;UBERON:0003076,1.36e-08,12;UBERON:0003057,1.36e-08,12;UBERON:0002950,3.20e-08,4;UBERON:0001891,3.20e-08,4;UBERON:0009616,3.20e-08,4;UBERON:0010286,3.20e-08,4;UBERON:0000025,5.98e-08,114;UBERON:0011216,2.57e-07,194;UBERON:0004111,5.89e-07,122;UBERON:0004684,7.59e-07,3;UBERON:0002275,7.59e-07,3 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,1.17646297606203,0,0,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,1.28629718017973,0,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0,0.270011876663381,0,0.285650984403804,1.10434270475807,0.244981598429908,0.0958454710182364,0,4.40463523997555,4.59674417106676,3.07213066512487,0.395658863190582,0.274462930807229,0,2.79182999001381,2.8138130501584,4.12555268997387,1.76777151284201,1.56608848879013,0.745597783301202,0.454357159999104,1.96486056277642,2.02905142091174,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.506719730950197,0.505524445014783,0.11418387971906,0.776813650941515,1.03909497345377,0.173485326766136,0.304465478312141,0.922461989024234,0.452167921657868,0.940709657085638,1.25666591329675,0,0.289198713839823,1.76922110389975,0.323533699894818,0,0,0,4.68449275218475,2.72280718857492,0,0.239630249011841,0,0,2.39665023047716,1.37250180845588,0.502617408451458,5.56237824615285,5.11430914660661,2.90903262383384,1.94689515681309,0,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0.43839146485515,0.556094498451196,0,0,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.329119699826961,0.32833492815819,0.162137619091711,0.877199924551994,0.878200461164203,0.671032093801859,3.99550902271842,0.411618449517138,0,0,0,0.464473343720877,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0,0.350679099451593,0.632365371242573,0.442830443938806,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0.486405680325106,0.274561413188081,1.43768206527355,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0,2.24770825982909,2.22702204525186,0,0.504941854408746,0.94652465824877,1.56175497718655,1.72338718186239,0.716906393857656,1.78238939265915,1.41538265394416,0.809621403349789,0.584511715822624,1.18586333383957,5.46246237917072,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,2.10837217149998,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,0.469343416127421,0,0.220528398054962,0.16488625294148,0.161464426695906,0.180938774784468,0,0,0,2.59595422814714,0.170870880797853,0,0,0,0,0,1.18984900995699,0.419854356970974,0.414599921413271,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0.598066184175915,0.330916980914195,0.194451188344048,0.258319646955462,0.337912250981556,0.352071715937262,0.5208175393758,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.308132871494482,0,0,0,0.120195449519969,0.295379054349154,0,0.228620419965,0,0.292373642219257,0.384847366561318,0,0,0,0,0,0.386379188064381,0.375364950902364,0.183151624267265,0.214368379079066,0,3.3885110557024,1.84130094602871,1.14579102687879,4.98374228796694,5.48066015816514,5.2877572817279,8.10027000278167,4.95353323546643,6.79713613476307,5.69536342927002,0,0.399024873401031,0,0.243106717068294,0,0,0.44449345560323,0,0,0,0.25347929989024,0.943131706930381,0.468207537349412,0.256100609619477,0.402048282689293,0.476293691283074,0.695305955669133,0,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.29551344712669,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p12@Oxr1 | |||
}} |
Revision as of 10:29, 13 September 2013
Short description: | p12@Oxr1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Oxr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -50bp_to_ENSMUST00000090096, ENSMUST00000110297, NM_001130166, uc007vot.2_5end |
EntrezGene: | Oxr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.21e-07 | 33 |
neuronal stem cell | 1.21e-07 | 33 |
neuroblast | 1.21e-07 | 33 |
electrically signaling cell | 1.21e-07 | 33 |
neural cell | 4.85e-07 | 43 |
electrically responsive cell | 5.78e-07 | 39 |
electrically active cell | 5.78e-07 | 39 |
raphe nuclei neuron | 7.59e-07 | 3 |
ectodermal cell | 8.44e-07 | 44 |
neurectodermal cell | 8.44e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.