FFCP PHASE1:Mm9::chr1:60099936..60100019,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70375|HGNC=|MCL_coexpression_id=60|UniProt=Q3TY65|association_with_transcript=-5bp_to_ENSMUST00000027172,NM_027407,uc007beb.1_5end|description=CAGE_peak_1_at_Ica1l_5end|id=chr1:60099936..60100019,-|ontology_enrichment_celltype=CL:0000117!3.22e-14!23;CL:0000337!3.22e-14!23;CL:0000540!2.34e-12!33;CL:0000047!2.34e-12!33;CL:0000031!2.34e-12!33;CL:0000404!2.34e-12!33;CL:0000221!7.79e-10!44;CL:0000133!7.79e-10!44;CL:0000393!1.64e-09!39;CL:0000211!1.64e-09!39;CL:0002319!1.97e-09!43;CL:0000055!4.39e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.41e-21,23;CL:0000337,3.41e-21,23;CL:0000540,1.16e-14,33;CL:0000047,1.16e-14,33;CL:0000031,1.16e-14,33;CL:0000404,1.16e-14,33;CL:0000393,3.99e-11,39;CL:0000211,3.99e-11,39;CL:0000221,6.73e-10,44;CL:0000133,6.73e-10,44;CL:0002319,2.35e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.71e-23!102;UBERON:0000924!3.71e-23!102;UBERON:0006601!3.71e-23!102;UBERON:0001017!5.39e-23!73;UBERON:0005743!5.39e-23!73;UBERON:0000073!8.57e-23!75;UBERON:0001016!8.57e-23!75;UBERON:0002346!1.09e-22!71;UBERON:0003075!1.09e-22!71;UBERON:0007284!1.09e-22!71;UBERON:0001049!4.74e-22!52;UBERON:0005068!4.74e-22!52;UBERON:0006241!4.74e-22!52;UBERON:0007135!4.74e-22!52;UBERON:0000033!1.56e-21!63;UBERON:0002020!1.21e-20!34;UBERON:0000955!2.28e-20!50;UBERON:0006238!2.28e-20!50;UBERON:0002616!8.19e-20!49;UBERON:0003056!2.18e-18!49;UBERON:0002791!3.19e-17!29;UBERON:0003528!3.19e-17!29;UBERON:0001893!3.19e-17!29;UBERON:0003080!9.94e-17!40;UBERON:0002780!3.95e-16!39;UBERON:0001890!3.95e-16!39;UBERON:0006240!3.95e-16!39;UBERON:0007811!4.31e-14!86;UBERON:0000153!3.46e-13!94;UBERON:0000956!2.65e-12!21;UBERON:0001869!2.65e-12!21;UBERON:0000203!2.65e-12!21;UBERON:0002619!3.01e-10!17;UBERON:0002021!2.79e-08!10;UBERON:0000411!2.79e-08!10;UBERON:0001950!2.79e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.16e-33,54;UBERON:0001049,6.19e-31,52;UBERON:0005068,6.19e-31,52;UBERON:0006241,6.19e-31,52;UBERON:0007135,6.19e-31,52;UBERON:0002020,1.69e-29,34;UBERON:0001017,1.77e-29,73;UBERON:0001016,3.31e-28,75;UBERON:0002346,4.46e-27,64;UBERON:0003075,4.46e-27,64;UBERON:0007284,4.46e-27,64;UBERON:0000955,9.67e-26,47;UBERON:0006238,9.67e-26,47;UBERON:0002616,6.51e-25,46;UBERON:0010371,3.05e-24,73;UBERON:0003528,3.19e-24,29;UBERON:0002791,3.19e-24,29;UBERON:0001893,3.19e-24,29;UBERON:0004121,1.93e-23,95;UBERON:0000924,1.93e-23,95;UBERON:0006601,1.93e-23,95;UBERON:0003080,2.21e-23,40;UBERON:0002780,1.82e-22,39;UBERON:0001890,1.82e-22,39;UBERON:0006240,1.82e-22,39;UBERON:0003056,1.17e-21,49;UBERON:0000956,1.20e-16,21;UBERON:0001869,1.20e-16,21;UBERON:0000203,1.20e-16,21;UBERON:0010314,7.60e-16,92;UBERON:0002619,1.78e-13,17;UBERON:0002021,5.54e-12,10;UBERON:0000411,5.54e-12,10;UBERON:0001950,5.54e-12,10;UBERON:0002420,1.03e-08,8;UBERON:0007245,1.03e-08,8;UBERON:0010009,1.03e-08,8;UBERON:0010011,1.03e-08,8;UBERON:0000454,1.03e-08,8;UBERON:0003076,7.12e-08,12;UBERON:0003057,7.12e-08,12;UBERON:0002240,3.99e-07,6;UBERON:0005174,3.99e-07,6;UBERON:0001137,3.99e-07,6|phase1_expression=6.24580503708696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0,0.439372365468944,0.194429899074283,0.55994568650145,0,0,0,0,0,0,0,13.1505699558739,10.0508286061686,9.50747105259269,0,0,0,0,0,0,0,4.97710139080693,5.53524347159932,7.78202357000113,13.7112472513826,7.95126747425809,6.49201235839256,4.50473713785711,6.43453150627015,3.30347642998166,12.896421146604,9.83081812839958,12.1335384711778,11.8933936683133,14.0646610050325,9.49222196604695,10.1297269805702,11.9182633265912,17.6777151284201,18.6506901846825,16.9623495701024,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.702222100658759,0.170430322578058,0.259786004602869,0.70667914902068,3.52108549441701,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.445326417194474,0.173485326766136,0,0.691846491768175,0.904335843315735,0.587943535678524,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,5.5628351432194,7.74952815209784,0,0,0,0,10.7849260371472,7.32000964509802,19.2251158732683,14.6012428961512,25.3158302757027,9.3504620051802,15.7374025175725,0.509196819251581,0.124406970610093,0.252722758433675,0.631325567659422,0.390361328888111,0.459804208866946,0.360124259610698,0.90422890701429,2.10913147369116,2.8185018462667,1.78033276663485,1.29351685369508,0,0.756424320671277,0.351902248327898,0,1.39023624612799,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0,17.8746456279508,11.1136981369627,0,0,0.213288250535234,0,0.128867461322093,0,0,0.380451252225118,0,0.329397909448022,0.502670417600539,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0.610953983535943,0,0.210407459670956,0.252946148497029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|EntrezGene=70375 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=Q3TY65 | |||
|association_with_transcript=-5bp_to_ENSMUST00000027172,NM_027407,uc007beb.1_5end | |||
|description=CAGE_peak_1_at_Ica1l_5end | |||
|id=chr1:60099936..60100019,- | |||
|ontology_enrichment_celltype=CL:0000117!3.22e-14!23;CL:0000337!3.22e-14!23;CL:0000540!2.34e-12!33;CL:0000047!2.34e-12!33;CL:0000031!2.34e-12!33;CL:0000404!2.34e-12!33;CL:0000221!7.79e-10!44;CL:0000133!7.79e-10!44;CL:0000393!1.64e-09!39;CL:0000211!1.64e-09!39;CL:0002319!1.97e-09!43;CL:0000055!4.39e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.41e-21,23;CL:0000337,3.41e-21,23;CL:0000540,1.16e-14,33;CL:0000047,1.16e-14,33;CL:0000031,1.16e-14,33;CL:0000404,1.16e-14,33;CL:0000393,3.99e-11,39;CL:0000211,3.99e-11,39;CL:0000221,6.73e-10,44;CL:0000133,6.73e-10,44;CL:0002319,2.35e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.71e-23!102;UBERON:0000924!3.71e-23!102;UBERON:0006601!3.71e-23!102;UBERON:0001017!5.39e-23!73;UBERON:0005743!5.39e-23!73;UBERON:0000073!8.57e-23!75;UBERON:0001016!8.57e-23!75;UBERON:0002346!1.09e-22!71;UBERON:0003075!1.09e-22!71;UBERON:0007284!1.09e-22!71;UBERON:0001049!4.74e-22!52;UBERON:0005068!4.74e-22!52;UBERON:0006241!4.74e-22!52;UBERON:0007135!4.74e-22!52;UBERON:0000033!1.56e-21!63;UBERON:0002020!1.21e-20!34;UBERON:0000955!2.28e-20!50;UBERON:0006238!2.28e-20!50;UBERON:0002616!8.19e-20!49;UBERON:0003056!2.18e-18!49;UBERON:0002791!3.19e-17!29;UBERON:0003528!3.19e-17!29;UBERON:0001893!3.19e-17!29;UBERON:0003080!9.94e-17!40;UBERON:0002780!3.95e-16!39;UBERON:0001890!3.95e-16!39;UBERON:0006240!3.95e-16!39;UBERON:0007811!4.31e-14!86;UBERON:0000153!3.46e-13!94;UBERON:0000956!2.65e-12!21;UBERON:0001869!2.65e-12!21;UBERON:0000203!2.65e-12!21;UBERON:0002619!3.01e-10!17;UBERON:0002021!2.79e-08!10;UBERON:0000411!2.79e-08!10;UBERON:0001950!2.79e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.16e-33,54;UBERON:0001049,6.19e-31,52;UBERON:0005068,6.19e-31,52;UBERON:0006241,6.19e-31,52;UBERON:0007135,6.19e-31,52;UBERON:0002020,1.69e-29,34;UBERON:0001017,1.77e-29,73;UBERON:0001016,3.31e-28,75;UBERON:0002346,4.46e-27,64;UBERON:0003075,4.46e-27,64;UBERON:0007284,4.46e-27,64;UBERON:0000955,9.67e-26,47;UBERON:0006238,9.67e-26,47;UBERON:0002616,6.51e-25,46;UBERON:0010371,3.05e-24,73;UBERON:0003528,3.19e-24,29;UBERON:0002791,3.19e-24,29;UBERON:0001893,3.19e-24,29;UBERON:0004121,1.93e-23,95;UBERON:0000924,1.93e-23,95;UBERON:0006601,1.93e-23,95;UBERON:0003080,2.21e-23,40;UBERON:0002780,1.82e-22,39;UBERON:0001890,1.82e-22,39;UBERON:0006240,1.82e-22,39;UBERON:0003056,1.17e-21,49;UBERON:0000956,1.20e-16,21;UBERON:0001869,1.20e-16,21;UBERON:0000203,1.20e-16,21;UBERON:0010314,7.60e-16,92;UBERON:0002619,1.78e-13,17;UBERON:0002021,5.54e-12,10;UBERON:0000411,5.54e-12,10;UBERON:0001950,5.54e-12,10;UBERON:0002420,1.03e-08,8;UBERON:0007245,1.03e-08,8;UBERON:0010009,1.03e-08,8;UBERON:0010011,1.03e-08,8;UBERON:0000454,1.03e-08,8;UBERON:0003076,7.12e-08,12;UBERON:0003057,7.12e-08,12;UBERON:0002240,3.99e-07,6;UBERON:0005174,3.99e-07,6;UBERON:0001137,3.99e-07,6 | |||
|phase1_expression=6.24580503708696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0,0.439372365468944,0.194429899074283,0.55994568650145,0,0,0,0,0,0,0,13.1505699558739,10.0508286061686,9.50747105259269,0,0,0,0,0,0,0,4.97710139080693,5.53524347159932,7.78202357000113,13.7112472513826,7.95126747425809,6.49201235839256,4.50473713785711,6.43453150627015,3.30347642998166,12.896421146604,9.83081812839958,12.1335384711778,11.8933936683133,14.0646610050325,9.49222196604695,10.1297269805702,11.9182633265912,17.6777151284201,18.6506901846825,16.9623495701024,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.702222100658759,0.170430322578058,0.259786004602869,0.70667914902068,3.52108549441701,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.445326417194474,0.173485326766136,0,0.691846491768175,0.904335843315735,0.587943535678524,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,5.5628351432194,7.74952815209784,0,0,0,0,10.7849260371472,7.32000964509802,19.2251158732683,14.6012428961512,25.3158302757027,9.3504620051802,15.7374025175725,0.509196819251581,0.124406970610093,0.252722758433675,0.631325567659422,0.390361328888111,0.459804208866946,0.360124259610698,0.90422890701429,2.10913147369116,2.8185018462667,1.78033276663485,1.29351685369508,0,0.756424320671277,0.351902248327898,0,1.39023624612799,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0,17.8746456279508,11.1136981369627,0,0,0.213288250535234,0,0.128867461322093,0,0,0.380451252225118,0,0.329397909448022,0.502670417600539,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0.610953983535943,0,0.210407459670956,0.252946148497029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0,0.221464689648775,0.637819074629948,0,0.172684981865896,0,0,0,0,0,6.26147300952389,7.97039468826982,0,0,0.631016438832513,0,0.646270193198397,0,0,0.849229592366497,0.809621403349789,1.16902343164525,0.790575555893047,7.06906896127976,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,3.06395645178409,0,0,0,0.354680467284547,1.07021290561242,1.48094118541909,0.608929898229199,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0.542816324353403,0.596861720015682,0.984845398470368,0,7.04616147639937,0,0.206386867963223,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0.539457385539283,0.247960367176008,0.26175594198403,0.129614973291793,0,55.2419079910507,0,0.165458490457098,0.388902376688095,0,0.168956125490778,0.704143431874524,0.13020438484395,0.209718688851422,21.9841549951666,36.5798107947489,0.948033361884535,0,0,0,0.179026695667481,0,0.600977247599844,0.443068581523732,0.504832249740738,0.914481679859998,0.403304740547362,0.292373642219257,0.192423683280659,1.16876902181569,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,18.6368108063632,14.7304075682297,20.6242384838183,24.4031518928036,23.9778881919725,17.3740596399631,15.5255175053315,18.0128481289688,17.2194115413998,10.8729665467882,0.103787347584177,0.798049746802062,1.02440163452481,1.45864030240976,1.46729213839588,2.38996560985018,2.00022055021454,1.85431551515005,0.962757628775446,1.51618327058278,1.2673964994512,2.45214243801899,2.06011316433741,1.98477972455095,2.35485422718014,0.952587382566147,3.01299247456624,1.54327376370964,1.64834360321323,2.06078488188156,1.37147700954166,1.77475806159337,1.43061713968393,2.32554266611726,1.97629698872194,2.19997980518359,1.82927972872773,1.57841826862706,1.62964936615034,1.68342681497322,2.01679530811096,2.26560309463796,1.63692417267876,2.78886314134739,1.92906610981141,3.99696924700713,1.63752125911786,1.50409737833809,0.765153328275374,0.882365676478062,0.695603506861264 | |||
|short_description=p1@Ica1l | |||
}} |
Revision as of 20:38, 13 September 2013
Short description: | p1@Ica1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ica1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -5bp_to_ENSMUST00000027172, NM_027407, uc007beb.1_5end |
EntrezGene: | Ica1l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.41e-21 | 23 |
neuroblast (sensu Vertebrata) | 3.41e-21 | 23 |
neuron | 1.16e-14 | 33 |
neuronal stem cell | 1.16e-14 | 33 |
neuroblast | 1.16e-14 | 33 |
electrically signaling cell | 1.16e-14 | 33 |
electrically responsive cell | 3.99e-11 | 39 |
electrically active cell | 3.99e-11 | 39 |
ectodermal cell | 6.73e-10 | 44 |
neurectodermal cell | 6.73e-10 | 44 |
neural cell | 2.35e-09 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.