FFCP PHASE1:Hg19::chr6:99286262..99286300,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C10|description=CAGE_peak_at_chr6:99286262..99286300,+|id=chr6:99286262..99286300,+|ontology_enrichment_celltype=CL:0002319!6.73e-15!25;CL:0000128!2.32e-13!7;CL:0000126!2.32e-13!7;CL:0000127!2.32e-13!7;CL:0002453!2.32e-13!7;CL:0000133!1.34e-10!59;CL:0000095!4.21e-10!17;CL:0000123!4.21e-10!17;CL:0000333!9.59e-10!41;CL:0000221!6.93e-08!71;CL:0000243!1.64e-07!15;CL:0000125!1.64e-07!15;CL:0000030!1.64e-07!15;CL:0000339!1.64e-07!15;CL:0002605!2.66e-07!3|ontology_enrichment_celltype_v019=CL:0002319;3.79e-15;25!CL:0002605;2.11e-14;3!CL:0000128;8.62e-11;7!CL:0000126;8.62e-11;7!CL:0000127;8.62e-11;7!CL:0000123;9.11e-10;2!CL:0000242;9.11e-10;2!CL:0000095;4.71e-08;17!CL:0000540;1.06e-07;6!CL:0000404;1.06e-07;6|ontology_enrichment_celltype_v019_2=CL:0002319,4.37e-15,25;CL:0002605,2.17e-14,3;CL:0000128,8.41e-11,7;CL:0000126,8.41e-11,7;CL:0000127,8.41e-11,7;CL:0002453,8.41e-11,7;CL:0000242,1.14e-09,2;CL:0000047,1.49e-09,8;CL:0000133,2.44e-08,59;CL:0000095,4.96e-08,17;CL:0000123,4.96e-08,17;CL:0000540,1.05e-07,6;CL:0000031,1.05e-07,6;CL:0000404,1.05e-07,6|ontology_enrichment_development_v019=UBERON:0006241;1.16e-13;3!UBERON:0003057;1.16e-13;3!UBERON:0006601;2.02e-08;82!CL:0000031;1.06e-07;6|ontology_enrichment_disease=DOID:171!3.03e-09!10|ontology_enrichment_disease_v019=DOID:171;1.28e-07;10|ontology_enrichment_disease_v019_2=DOID:171,1.10e-07,10|ontology_enrichment_uberon=UBERON:0001017!4.15e-64!82;UBERON:0005743!2.21e-60!86;UBERON:0000073!4.24e-60!94;UBERON:0001016!4.24e-60!94;UBERON:0001049!1.89e-59!57;UBERON:0005068!1.89e-59!57;UBERON:0006241!1.89e-59!57;UBERON:0007135!1.89e-59!57;UBERON:0000955!8.03e-53!69;UBERON:0006238!8.03e-53!69;UBERON:0002616!1.65e-48!59;UBERON:0002780!1.52e-45!41;UBERON:0001890!1.52e-45!41;UBERON:0006240!1.52e-45!41;UBERON:0002346!2.51e-44!90;UBERON:0003080!3.16e-44!42;UBERON:0002020!8.08e-44!34;UBERON:0003528!8.08e-44!34;UBERON:0001893!5.07e-43!34;UBERON:0002791!1.31e-41!33;UBERON:0001869!3.28e-40!32;UBERON:0003075!1.32e-38!86;UBERON:0007284!1.32e-38!86;UBERON:0000924!8.88e-37!173;UBERON:0006601!8.88e-37!173;UBERON:0004121!2.52e-32!169;UBERON:0000956!2.88e-29!25;UBERON:0000203!2.88e-29!25;UBERON:0003056!3.45e-29!61;UBERON:0000033!1.45e-27!123;UBERON:0000153!1.32e-25!129;UBERON:0007811!1.32e-25!129;UBERON:0002619!6.09e-24!22;UBERON:0001950!1.08e-20!20;UBERON:0002308!3.47e-16!9;UBERON:0000125!3.47e-16!9;UBERON:0003076!1.01e-15!15;UBERON:0003057!1.01e-15!15;UBERON:0007023!1.53e-15!115;UBERON:0009663!8.99e-13!7;UBERON:0002420!1.41e-12!9;UBERON:0007245!1.41e-12!9;UBERON:0010009!1.41e-12!9;UBERON:0010011!1.41e-12!9;UBERON:0000454!1.41e-12!9;UBERON:0004733!6.97e-11!12;UBERON:0002028!6.97e-11!12;UBERON:0007277!6.97e-11!12;UBERON:0004732!6.65e-10!13;UBERON:0001872!7.22e-10!5;UBERON:0000025!1.01e-09!194;UBERON:0002680!6.51e-09!9;UBERON:0001895!6.51e-09!9;UBERON:0010092!6.51e-09!9;UBERON:0001871!2.15e-08!7;UBERON:0002298!3.64e-08!8;UBERON:0000369!9.88e-08!4;UBERON:0002435!9.88e-08!4;UBERON:0000204!9.88e-08!4;UBERON:0010082!9.88e-08!4;UBERON:0000200!1.04e-07!6;UBERON:0002021!1.56e-07!5;UBERON:0002240!5.73e-07!3;UBERON:0002771!9.19e-07!3|ontology_enrichment_uberon_v019=UBERON:0003528;7.03e-32;34!UBERON:0002020;7.03e-32;34!UBERON:0000956;1.14e-31;25!UBERON:0000203;1.14e-31;25!UBERON:0001869;6.91e-30;32!UBERON:0002791;4.10e-29;32!UBERON:0001893;6.73e-26;34!UBERON:0002780;1.38e-23;41!UBERON:0001890;1.38e-23;41!UBERON:0002619;3.81e-22;22!UBERON:0001950;3.21e-20;20!UBERON:0001017;8.49e-20;75!UBERON:0000073;1.00e-16;53!UBERON:0002616;1.00e-16;53!UBERON:0001016;1.67e-15;83!UBERON:0002021;2.18e-15;5!UBERON:0000955;2.85e-15;68!UBERON:0002240;1.16e-13;3!UBERON:0005174;1.16e-13;3!UBERON:0001137;1.16e-13;3!UBERON:0002148;1.70e-09;2!UBERON:0006331;1.70e-09;2!UBERON:0009662;1.70e-09;2!UBERON:0001872;4.53e-09;5!UBERON:0000125;4.75e-08;9!UBERON:0002308;4.75e-08;9!UBERON:0011216;1.63e-07;132!UBERON:0002298;6.22e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.27e-49,89;UBERON:0001017,9.70e-49,81;UBERON:0001049,6.60e-40,56;UBERON:0005068,6.60e-40,56;UBERON:0006241,6.60e-40,56;UBERON:0007135,6.60e-40,56;UBERON:0003528,6.45e-38,34;UBERON:0002020,6.45e-38,34;UBERON:0000073,4.66e-32,53;UBERON:0002616,4.66e-32,53;UBERON:0002791,5.49e-32,32;UBERON:0001869,5.49e-32,32;UBERON:0000955,1.29e-31,68;UBERON:0006238,1.29e-31,68;UBERON:0000956,1.51e-31,25;UBERON:0000203,1.51e-31,25;UBERON:0002780,3.63e-31,41;UBERON:0001890,3.63e-31,41;UBERON:0003080,3.63e-31,41;UBERON:0006240,3.63e-31,41;UBERON:0001893,6.07e-30,34;UBERON:0004121,8.60e-30,171;UBERON:0000924,8.60e-30,171;UBERON:0006601,8.60e-30,171;UBERON:0002346,4.53e-29,86;UBERON:0003075,1.28e-25,82;UBERON:0007284,1.28e-25,82;UBERON:0010371,7.52e-23,104;UBERON:0002619,4.81e-22,22;UBERON:0001950,3.69e-20,20;UBERON:0003056,9.91e-20,61;UBERON:0011216,3.36e-18,223;UBERON:00020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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_at_chr6:99286262..99286300,+ | |||
|id=chr6:99286262..99286300,+ | |||
|ontology_enrichment_celltype=CL:0002319!6.73e-15!25;CL:0000128!2.32e-13!7;CL:0000126!2.32e-13!7;CL:0000127!2.32e-13!7;CL:0002453!2.32e-13!7;CL:0000133!1.34e-10!59;CL:0000095!4.21e-10!17;CL:0000123!4.21e-10!17;CL:0000333!9.59e-10!41;CL:0000221!6.93e-08!71;CL:0000243!1.64e-07!15;CL:0000125!1.64e-07!15;CL:0000030!1.64e-07!15;CL:0000339!1.64e-07!15;CL:0002605!2.66e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.79e-15;25!CL:0002605;2.11e-14;3!CL:0000128;8.62e-11;7!CL:0000126;8.62e-11;7!CL:0000127;8.62e-11;7!CL:0000123;9.11e-10;2!CL:0000242;9.11e-10;2!CL:0000095;4.71e-08;17!CL:0000540;1.06e-07;6!CL:0000404;1.06e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.37e-15,25;CL:0002605,2.17e-14,3;CL:0000128,8.41e-11,7;CL:0000126,8.41e-11,7;CL:0000127,8.41e-11,7;CL:0002453,8.41e-11,7;CL:0000242,1.14e-09,2;CL:0000047,1.49e-09,8;CL:0000133,2.44e-08,59;CL:0000095,4.96e-08,17;CL:0000123,4.96e-08,17;CL:0000540,1.05e-07,6;CL:0000031,1.05e-07,6;CL:0000404,1.05e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.16e-13;3!UBERON:0003057;1.16e-13;3!UBERON:0006601;2.02e-08;82!CL:0000031;1.06e-07;6 | |||
|ontology_enrichment_disease=DOID:171!3.03e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.28e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.10e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.15e-64!82;UBERON:0005743!2.21e-60!86;UBERON:0000073!4.24e-60!94;UBERON:0001016!4.24e-60!94;UBERON:0001049!1.89e-59!57;UBERON:0005068!1.89e-59!57;UBERON:0006241!1.89e-59!57;UBERON:0007135!1.89e-59!57;UBERON:0000955!8.03e-53!69;UBERON:0006238!8.03e-53!69;UBERON:0002616!1.65e-48!59;UBERON:0002780!1.52e-45!41;UBERON:0001890!1.52e-45!41;UBERON:0006240!1.52e-45!41;UBERON:0002346!2.51e-44!90;UBERON:0003080!3.16e-44!42;UBERON:0002020!8.08e-44!34;UBERON:0003528!8.08e-44!34;UBERON:0001893!5.07e-43!34;UBERON:0002791!1.31e-41!33;UBERON:0001869!3.28e-40!32;UBERON:0003075!1.32e-38!86;UBERON:0007284!1.32e-38!86;UBERON:0000924!8.88e-37!173;UBERON:0006601!8.88e-37!173;UBERON:0004121!2.52e-32!169;UBERON:0000956!2.88e-29!25;UBERON:0000203!2.88e-29!25;UBERON:0003056!3.45e-29!61;UBERON:0000033!1.45e-27!123;UBERON:0000153!1.32e-25!129;UBERON:0007811!1.32e-25!129;UBERON:0002619!6.09e-24!22;UBERON:0001950!1.08e-20!20;UBERON:0002308!3.47e-16!9;UBERON:0000125!3.47e-16!9;UBERON:0003076!1.01e-15!15;UBERON:0003057!1.01e-15!15;UBERON:0007023!1.53e-15!115;UBERON:0009663!8.99e-13!7;UBERON:0002420!1.41e-12!9;UBERON:0007245!1.41e-12!9;UBERON:0010009!1.41e-12!9;UBERON:0010011!1.41e-12!9;UBERON:0000454!1.41e-12!9;UBERON:0004733!6.97e-11!12;UBERON:0002028!6.97e-11!12;UBERON:0007277!6.97e-11!12;UBERON:0004732!6.65e-10!13;UBERON:0001872!7.22e-10!5;UBERON:0000025!1.01e-09!194;UBERON:0002680!6.51e-09!9;UBERON:0001895!6.51e-09!9;UBERON:0010092!6.51e-09!9;UBERON:0001871!2.15e-08!7;UBERON:0002298!3.64e-08!8;UBERON:0000369!9.88e-08!4;UBERON:0002435!9.88e-08!4;UBERON:0000204!9.88e-08!4;UBERON:0010082!9.88e-08!4;UBERON:0000200!1.04e-07!6;UBERON:0002021!1.56e-07!5;UBERON:0002240!5.73e-07!3;UBERON:0002771!9.19e-07!3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0.313454721478088,5.15224776835902,3.96935832711364,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,0,7.73288812777695,2.34522771468088,12.7587750330633,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,1.6480387422676,0,0,0,1.0077309914171,4.90889676010343,0,0,0,0,0,0,0,0,1.93866549219044,0.649376687132959,1.99613798001194,0,0,0,0,0,0,2.06846023944879,11.0809753085637,0,2.65722415744152,0.723578631752448,0,0,0.295547618953547,1.97446857438575,0.21787692703798,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0.167821586975843,0.569261198172555,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,1.87411556580271,0,0,0,0,0,3.36680037793539,0,0.150323419414493,0.414752765588989,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0.104602846312333,0,0,3.60252173225874,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,2.04305109167363,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,1.3223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0.732157589411779,1.001527445652,1.72022758707021,0.776503360757966,0,0.276697269872462,0,0.909894705249887,0.285465333544967,0,2.34167452903441,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0.168942440653073,0,0,0,2.21213497842769,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,4.2461804301092,0.218419276384028,0.509197589862076,2.97604888142356,6.07285244869111,2.79322458986622,0,0,0,0,0,0.128458450192919,2.8339315265117,4.15048033548593,3.07674546361133,19.9136640015157,0,1.45328081068666,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0.327543835020193,0,0.270150338473579,3.12431239445539,2.48024155801421,0.126831620387814,20.2380679336741,0,0,0.703484977438482,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0.314231179832004,0,0,0,0,0,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0.79062257427272,0.219881033490858,0,0,0,0,0,0,1.57046773691956,1.48523200163543,2.113278637917,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.135982980381829,6.98161104544604,0,0,0,0,0.756998549010474,0,0,0,0,0,0,0,0,4.1458471972939,0.827463966895162,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:99286262..99286300,+ | |||
}} |
Revision as of 22:12, 13 September 2013
Short description: | p@chr6:99286262..99286300, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:99286262..99286300, + |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.37e-15 | 25 |
astrocyte of the cerebral cortex | 2.17e-14 | 3 |
oligodendrocyte | 8.41e-11 | 7 |
macroglial cell | 8.41e-11 | 7 |
astrocyte | 8.41e-11 | 7 |
oligodendrocyte precursor cell | 8.41e-11 | 7 |
Merkel cell | 1.14e-09 | 2 |
neuronal stem cell | 1.49e-09 | 8 |
neurectodermal cell | 2.44e-08 | 59 |
neuron associated cell | 4.96e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 4.96e-08 | 17 |
neuron | 1.05e-07 | 6 |
neuroblast | 1.05e-07 | 6 |
electrically signaling cell | 1.05e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.10e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.