FFCP PHASE1:Mm9::chr3:8667033..8667046,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=15213|HGNC=|MCL_coexpression_id=747|UniProt=Q9QUM5|association_with_transcript=0bp_to_ENSMUST00000042412,NM_010423,uc008oop.1_5end|description=CAGE_peak_3_at_Hey1_5end|id=chr3:8667033..8667046,-|ontology_enrichment_celltype=CL:0000221!2.91e-16!44;CL:0000133!2.91e-16!44;CL:0002319!1.46e-15!43;CL:0000117!1.67e-12!23;CL:0000337!1.67e-12!23;CL:0000540!3.41e-11!33;CL:0000047!3.41e-11!33;CL:0000031!3.41e-11!33;CL:0000404!3.41e-11!33;CL:0000055!7.99e-11!50;CL:0000393!1.35e-07!39;CL:0000211!1.35e-07!39|ontology_enrichment_celltype_v019_2=CL:0000221,2.98e-19,44;CL:0000133,2.98e-19,44;CL:0002319,3.34e-18,43;CL:0000117,4.01e-17,23;CL:0000337,4.01e-17,23;CL:0000540,4.22e-13,33;CL:0000047,4.22e-13,33;CL:0000031,4.22e-13,33;CL:0000404,4.22e-13,33;CL:0000393,6.90e-10,39;CL:0000211,6.90e-10,39;CL:0002321,9.21e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.52e-30!75;UBERON:0001016!2.52e-30!75;UBERON:0001017!6.89e-30!73;UBERON:0005743!6.89e-30!73;UBERON:0004121!3.26e-26!102;UBERON:0000924!3.26e-26!102;UBERON:0006601!3.26e-26!102;UBERON:0001049!6.17e-24!52;UBERON:0005068!6.17e-24!52;UBERON:0006241!6.17e-24!52;UBERON:0007135!6.17e-24!52;UBERON:0000033!3.60e-23!63;UBERON:0000955!1.22e-22!50;UBERON:0006238!1.22e-22!50;UBERON:0002346!1.79e-22!71;UBERON:0003075!1.79e-22!71;UBERON:0007284!1.79e-22!71;UBERON:0002616!3.72e-22!49;UBERON:0003056!1.17e-17!49;UBERON:0003080!7.10e-17!40;UBERON:0002780!2.74e-16!39;UBERON:0001890!2.74e-16!39;UBERON:0006240!2.74e-16!39;UBERON:0002020!5.66e-16!34;UBERON:0000153!7.64e-15!94;UBERON:0007811!1.20e-13!86;UBERON:0002791!5.83e-13!29;UBERON:0003528!5.83e-13!29;UBERON:0001893!5.83e-13!29;UBERON:0000025!3.43e-10!114;UBERON:0004111!5.19e-10!122;UBERON:0000956!1.28e-09!21;UBERON:0001869!1.28e-09!21;UBERON:0000203!1.28e-09!21;UBERON:0002619!8.93e-08!17;UBERON:0003076!9.64e-08!12;UBERON:0003057!9.64e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.59e-37,73;UBERON:0001016,1.59e-36,75;UBERON:0000073,5.08e-32,54;UBERON:0004121,8.46e-31,95;UBERON:0000924,8.46e-31,95;UBERON:0006601,8.46e-31,95;UBERON:0001049,1.16e-29,52;UBERON:0005068,1.16e-29,52;UBERON:0006241,1.16e-29,52;UBERON:0007135,1.16e-29,52;UBERON:0002346,2.16e-27,64;UBERON:0003075,2.16e-27,64;UBERON:0007284,2.16e-27,64;UBERON:0010371,7.78e-25,73;UBERON:0000955,1.41e-24,47;UBERON:0006238,1.41e-24,47;UBERON:0002616,7.84e-24,46;UBERON:0002020,5.41e-21,34;UBERON:0003080,1.05e-19,40;UBERON:0010314,3.26e-19,92;UBERON:0002780,8.23e-19,39;UBERON:0001890,8.23e-19,39;UBERON:0006240,8.23e-19,39;UBERON:0003056,1.70e-18,49;UBERON:0003528,3.13e-16,29;UBERON:0002791,3.13e-16,29;UBERON:0001893,3.13e-16,29;UBERON:0004111,2.45e-13,122;UBERON:0000025,6.91e-13,114;UBERON:0000956,6.04e-12,21;UBERON:0001869,6.04e-12,21;UBERON:0000203,6.04e-12,21;UBERON:0003076,1.35e-10,12;UBERON:0003057,1.35e-10,12;UBERON:0011216,1.70e-09,194;UBERON:0002619,5.04e-09,17;UBERON:0000119,2.06e-08,176;UBERON:0000483,2.76e-08,174;UBERON:0002240,5.62e-07,6;UBERON:0005174,5.62e-07,6;UBERON:0001137,5.62e-07,6|phase1_expression=1.92178616525753,1.39590163055744,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0.57423196411502,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.36050312760893,3.95435128922049,2.13872888981712,1.1198913730029,2.87505128729943,0,0.725362142011344,0,0.257259436035947,0.286533439938757,0,2.02316460859598,1.5869729378161,4.43681982454325,1.0165335962074,0,0,0,0,4.79360176829448,8.4528027170742,3.31806759387129,1.75507719831198,2.10324961351382,8.2838785477103,3.75476519617743,0.857435594504678,2.1086003624012,2.75765635983006,3.30347642998166,2.55374676170375,4.14737639791857,0.923204014111357,1.18933936683133,1.56274011167028,4.4669279840221,2.25105044012672,3.51435969886663,2.65165726926301,2.42031857358475,2.23679334990361,0.757261933331841,1.28471652181535,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,5.0703631119605,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0.304465478312141,0.922461989024234,0.753613202763113,0.352766121407114,0,0,0,0,0.161766849947409,0.220841518460394,0,0,3.51336956413857,2.72280718857492,0,0,0,0,2.69623150928681,3.20250421973039,1.13088916901578,1.91206752211504,3.06858548796397,1.87009240103604,1.94689515681309,0.305518091550949,0.248813941220186,0,0.210441855886474,1.30120442962704,1.83921683546778,1.80062129805349,0.753524089178575,1.36072998302656,0.768682321709099,0.655912071918102,0.517406741478031,4.52692785158969,1.32374256117473,1.05570674498369,1.09597866213787,0.834141747676794,0.348252166522167,1.23469281844766,0.59710280045548,0,0,0,2.89976081549703,0.234526059981096,0.900310307305074,0.23674473558521,0.393528463494808,1.54267112887378,1.39520366850245,0.536546802799238,0.700592054203017,0.329119699826961,0.656669856316381,0.324275238183423,0.877199924551994,0.658650345873152,0.671032093801859,1.89260953707715,0.617427674275707,0.330418782983798,0.264450566663544,0.426576501070468,0.696710015581316,0.257734922644187,0.403367049246685,0,0.570676878337677,0.949058123089023,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,2.0863469104839,0.799739588268102,2.25415471346161,0.814605311381257,0.969762435838129,0.911765658574141,0.379419222745544,0.147610147979602,0.31399745568275,0,0.296452627087149,0.166845105716094,0,0,0,0.482354319504834,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,1.47802552133284,0.947457058852424,0,0.509235257325564,0.938760993154008,1.50755631697634,0.952174563544055,1.36593553500459,1.41871629695572,1.55025282754142,2.07291199254733,0.327726629431476,2.24490476425664,2.02508682014116,0,0,0,0.551873492609465,3.37156238974363,2.34423373184406,0,0.757412781613119,0.631016438832513,1.56175497718655,0.215423397732799,0.716906393857656,0.445597348164788,0.566153061577665,0,1.46127928955656,0.395287777946524,1.92792789853084,0.425820255624806,0.35613120733451,0.325773918707152,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0.316036757935816,0,0,0.680879211507576,1.98067203434441,2.32845630808958,1.92903331528433,0.886701168211368,0.891844088010353,1.81003922662333,1.8267896946876,0,0.21183207086382,1.54369878638473,0.16488625294148,0.807322133479528,0.241251699712623,0.477489376012546,0.164140899745061,0,2.03967832211561,0,0.412773735926445,0.185194527369712,0,0,0,1.5298058699447,0.279902904647316,0.138199973804424,0,0.632671987162271,0.609958401380546,0.108005340821801,0.418176592028937,0.218362563746178,0.269728692769641,0.247960367176008,0,0.259229946583586,0,0,0.598066184175915,1.65458490457098,0.583353565032143,0.387479470433193,0.337912250981556,0.117357238645754,0.651021924219751,0.838874755405687,0.241584120826006,0.288030006257865,0,4.05450430580328,1.54066435747241,0.77952493786677,0.358053391334963,0.39736270956253,0.240390899039938,0.147689527174577,0.403865799792591,0.304827226619999,0,0.0974578807397524,0.384847366561318,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.36630324853453,0,0,1.12950368523413,2.76195141904306,2.86447756719698,0.859265911718438,1.37016503954128,2.2661816921691,2.02506750069542,2.70192721934532,1.35942722695261,2.5888015587591,1.14166082342594,1.59609949360412,0.682934423016537,0,0.419226325255965,0.919217542250071,0.888986911206461,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0.842773567228942,0.576226371643824,0.287177344778066,0.476293691283074,0.695305955669133,0.77163688185482,0.412085900803307,1.03039244094078,0.342869252385415,0.887379030796687,0.715308569841963,0.581385666529314,0.376437521661322,1.09998990259179,0,0.526139422875686,0.543216455383447,0,0.474540072496697,0.985044823755635,1.63692417267876,0.464810523557898,0.192906610981141,1.49886346762768,0.701794825336225,0.429742108096597,0.191288332068843,1.10295709559758,0.695603506861264|short_description=p3@Hey1}} | ||
|EntrezGene=15213 | |||
|HGNC= | |||
|MCL_coexpression_id=747 | |||
|UniProt=Q9QUM5 | |||
|association_with_transcript=0bp_to_ENSMUST00000042412,NM_010423,uc008oop.1_5end | |||
|description=CAGE_peak_3_at_Hey1_5end | |||
|id=chr3:8667033..8667046,- | |||
|ontology_enrichment_celltype=CL:0000221!2.91e-16!44;CL:0000133!2.91e-16!44;CL:0002319!1.46e-15!43;CL:0000117!1.67e-12!23;CL:0000337!1.67e-12!23;CL:0000540!3.41e-11!33;CL:0000047!3.41e-11!33;CL:0000031!3.41e-11!33;CL:0000404!3.41e-11!33;CL:0000055!7.99e-11!50;CL:0000393!1.35e-07!39;CL:0000211!1.35e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.98e-19,44;CL:0000133,2.98e-19,44;CL:0002319,3.34e-18,43;CL:0000117,4.01e-17,23;CL:0000337,4.01e-17,23;CL:0000540,4.22e-13,33;CL:0000047,4.22e-13,33;CL:0000031,4.22e-13,33;CL:0000404,4.22e-13,33;CL:0000393,6.90e-10,39;CL:0000211,6.90e-10,39;CL:0002321,9.21e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.52e-30!75;UBERON:0001016!2.52e-30!75;UBERON:0001017!6.89e-30!73;UBERON:0005743!6.89e-30!73;UBERON:0004121!3.26e-26!102;UBERON:0000924!3.26e-26!102;UBERON:0006601!3.26e-26!102;UBERON:0001049!6.17e-24!52;UBERON:0005068!6.17e-24!52;UBERON:0006241!6.17e-24!52;UBERON:0007135!6.17e-24!52;UBERON:0000033!3.60e-23!63;UBERON:0000955!1.22e-22!50;UBERON:0006238!1.22e-22!50;UBERON:0002346!1.79e-22!71;UBERON:0003075!1.79e-22!71;UBERON:0007284!1.79e-22!71;UBERON:0002616!3.72e-22!49;UBERON:0003056!1.17e-17!49;UBERON:0003080!7.10e-17!40;UBERON:0002780!2.74e-16!39;UBERON:0001890!2.74e-16!39;UBERON:0006240!2.74e-16!39;UBERON:0002020!5.66e-16!34;UBERON:0000153!7.64e-15!94;UBERON:0007811!1.20e-13!86;UBERON:0002791!5.83e-13!29;UBERON:0003528!5.83e-13!29;UBERON:0001893!5.83e-13!29;UBERON:0000025!3.43e-10!114;UBERON:0004111!5.19e-10!122;UBERON:0000956!1.28e-09!21;UBERON:0001869!1.28e-09!21;UBERON:0000203!1.28e-09!21;UBERON:0002619!8.93e-08!17;UBERON:0003076!9.64e-08!12;UBERON:0003057!9.64e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.59e-37,73;UBERON:0001016,1.59e-36,75;UBERON:0000073,5.08e-32,54;UBERON:0004121,8.46e-31,95;UBERON:0000924,8.46e-31,95;UBERON:0006601,8.46e-31,95;UBERON:0001049,1.16e-29,52;UBERON:0005068,1.16e-29,52;UBERON:0006241,1.16e-29,52;UBERON:0007135,1.16e-29,52;UBERON:0002346,2.16e-27,64;UBERON:0003075,2.16e-27,64;UBERON:0007284,2.16e-27,64;UBERON:0010371,7.78e-25,73;UBERON:0000955,1.41e-24,47;UBERON:0006238,1.41e-24,47;UBERON:0002616,7.84e-24,46;UBERON:0002020,5.41e-21,34;UBERON:0003080,1.05e-19,40;UBERON:0010314,3.26e-19,92;UBERON:0002780,8.23e-19,39;UBERON:0001890,8.23e-19,39;UBERON:0006240,8.23e-19,39;UBERON:0003056,1.70e-18,49;UBERON:0003528,3.13e-16,29;UBERON:0002791,3.13e-16,29;UBERON:0001893,3.13e-16,29;UBERON:0004111,2.45e-13,122;UBERON:0000025,6.91e-13,114;UBERON:0000956,6.04e-12,21;UBERON:0001869,6.04e-12,21;UBERON:0000203,6.04e-12,21;UBERON:0003076,1.35e-10,12;UBERON:0003057,1.35e-10,12;UBERON:0011216,1.70e-09,194;UBERON:0002619,5.04e-09,17;UBERON:0000119,2.06e-08,176;UBERON:0000483,2.76e-08,174;UBERON:0002240,5.62e-07,6;UBERON:0005174,5.62e-07,6;UBERON:0001137,5.62e-07,6 | |||
|phase1_expression=1.92178616525753,1.39590163055744,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0.57423196411502,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.36050312760893,3.95435128922049,2.13872888981712,1.1198913730029,2.87505128729943,0,0.725362142011344,0,0.257259436035947,0.286533439938757,0,2.02316460859598,1.5869729378161,4.43681982454325,1.0165335962074,0,0,0,0,4.79360176829448,8.4528027170742,3.31806759387129,1.75507719831198,2.10324961351382,8.2838785477103,3.75476519617743,0.857435594504678,2.1086003624012,2.75765635983006,3.30347642998166,2.55374676170375,4.14737639791857,0.923204014111357,1.18933936683133,1.56274011167028,4.4669279840221,2.25105044012672,3.51435969886663,2.65165726926301,2.42031857358475,2.23679334990361,0.757261933331841,1.28471652181535,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,5.0703631119605,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0.304465478312141,0.922461989024234,0.753613202763113,0.352766121407114,0,0,0,0,0.161766849947409,0.220841518460394,0,0,3.51336956413857,2.72280718857492,0,0,0,0,2.69623150928681,3.20250421973039,1.13088916901578,1.91206752211504,3.06858548796397,1.87009240103604,1.94689515681309,0.305518091550949,0.248813941220186,0,0.210441855886474,1.30120442962704,1.83921683546778,1.80062129805349,0.753524089178575,1.36072998302656,0.768682321709099,0.655912071918102,0.517406741478031,4.52692785158969,1.32374256117473,1.05570674498369,1.09597866213787,0.834141747676794,0.348252166522167,1.23469281844766,0.59710280045548,0,0,0,2.89976081549703,0.234526059981096,0.900310307305074,0.23674473558521,0.393528463494808,1.54267112887378,1.39520366850245,0.536546802799238,0.700592054203017,0.329119699826961,0.656669856316381,0.324275238183423,0.877199924551994,0.658650345873152,0.671032093801859,1.89260953707715,0.617427674275707,0.330418782983798,0.264450566663544,0.426576501070468,0.696710015581316,0.257734922644187,0.403367049246685,0,0.570676878337677,0.949058123089023,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,2.0863469104839,0.799739588268102,2.25415471346161,0.814605311381257,0.969762435838129,0.911765658574141,0.379419222745544,0.147610147979602,0.31399745568275,0,0.296452627087149,0.166845105716094,0,0,0,0.482354319504834,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,1.47802552133284,0.947457058852424,0,0.509235257325564,0.938760993154008,1.50755631697634,0.952174563544055,1.36593553500459,1.41871629695572,1.55025282754142,2.07291199254733,0.327726629431476,2.24490476425664,2.02508682014116,0,0,0,0.551873492609465,3.37156238974363,2.34423373184406,0,0.757412781613119,0.631016438832513,1.56175497718655,0.215423397732799,0.716906393857656,0.445597348164788,0.566153061577665,0,1.46127928955656,0.395287777946524,1.92792789853084,0.425820255624806,0.35613120733451,0.325773918707152,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0.316036757935816,0,0,0.680879211507576,1.98067203434441,2.32845630808958,1.92903331528433,0.886701168211368,0.891844088010353,1.81003922662333,1.8267896946876,0,0.21183207086382,1.54369878638473,0.16488625294148,0.807322133479528,0.241251699712623,0.477489376012546,0.164140899745061,0,2.03967832211561,0,0.412773735926445,0.185194527369712,0,0,0,1.5298058699447,0.279902904647316,0.138199973804424,0,0.632671987162271,0.609958401380546,0.108005340821801,0.418176592028937,0.218362563746178,0.269728692769641,0.247960367176008,0,0.259229946583586,0,0,0.598066184175915,1.65458490457098,0.583353565032143,0.387479470433193,0.337912250981556,0.117357238645754,0.651021924219751,0.838874755405687,0.241584120826006,0.288030006257865,0,4.05450430580328,1.54066435747241,0.77952493786677,0.358053391334963,0.39736270956253,0.240390899039938,0.147689527174577,0.403865799792591,0.304827226619999,0,0.0974578807397524,0.384847366561318,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.36630324853453,0,0,1.12950368523413,2.76195141904306,2.86447756719698,0.859265911718438,1.37016503954128,2.2661816921691,2.02506750069542,2.70192721934532,1.35942722695261,2.5888015587591,1.14166082342594,1.59609949360412,0.682934423016537,0,0.419226325255965,0.919217542250071,0.888986911206461,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0.842773567228942,0.576226371643824,0.287177344778066,0.476293691283074,0.695305955669133,0.77163688185482,0.412085900803307,1.03039244094078,0.342869252385415,0.887379030796687,0.715308569841963,0.581385666529314,0.376437521661322,1.09998990259179,0,0.526139422875686,0.543216455383447,0,0.474540072496697,0.985044823755635,1.63692417267876,0.464810523557898,0.192906610981141,1.49886346762768,0.701794825336225,0.429742108096597,0.191288332068843,1.10295709559758,0.695603506861264 | |||
|short_description=p3@Hey1 | |||
}} |
Revision as of 02:42, 14 September 2013
Short description: | p3@Hey1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hey1_5end |
Coexpression cluster: | MCL_coexpression_mm9:747 |
Association with transcript: | 0bp_to_ENSMUST00000042412, NM_010423, uc008oop.1_5end |
EntrezGene: | Hey1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.98e-19 | 44 |
neurectodermal cell | 2.98e-19 | 44 |
neural cell | 3.34e-18 | 43 |
CNS neuron (sensu Vertebrata) | 4.01e-17 | 23 |
neuroblast (sensu Vertebrata) | 4.01e-17 | 23 |
neuron | 4.22e-13 | 33 |
neuronal stem cell | 4.22e-13 | 33 |
neuroblast | 4.22e-13 | 33 |
electrically signaling cell | 4.22e-13 | 33 |
electrically responsive cell | 6.90e-10 | 39 |
electrically active cell | 6.90e-10 | 39 |
embryonic cell | 9.21e-09 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.