FFCP PHASE1:Mm9::chr9:41254760..41254771,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=224|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:41254760..41254771,+|id=chr9:41254760..41254771,+|ontology_enrichment_celltype=CL:0000117!3.05e-21!23;CL:0000337!3.05e-21!23;CL:0000540!1.74e-17!33;CL:0000047!1.74e-17!33;CL:0000031!1.74e-17!33;CL:0000404!1.74e-17!33;CL:0002319!7.17e-16!43;CL:0000221!2.84e-15!44;CL:0000133!2.84e-15!44;CL:0000393!2.29e-13!39;CL:0000211!2.29e-13!39;CL:0000055!3.24e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.75e-30,23;CL:0000337,8.75e-30,23;CL:0000540,4.12e-20,33;CL:0000047,4.12e-20,33;CL:0000031,4.12e-20,33;CL:0000404,4.12e-20,33;CL:0000393,1.11e-16,39;CL:0000211,1.11e-16,39;CL:0002319,6.31e-15,43;CL:0000221,1.55e-14,44;CL:0000133,1.55e-14,44;CL:0000120,1.80e-14,3;CL:0002613,2.43e-14,3;CL:0002321,2.62e-08,70;CL:0002612,9.45e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.90e-30!73;UBERON:0005743!1.90e-30!73;UBERON:0000073!3.87e-29!75;UBERON:0001016!3.87e-29!75;UBERON:0001049!2.35e-27!52;UBERON:0005068!2.35e-27!52;UBERON:0006241!2.35e-27!52;UBERON:0007135!2.35e-27!52;UBERON:0002020!1.22e-24!34;UBERON:0000955!9.48e-23!50;UBERON:0006238!9.48e-23!50;UBERON:0002616!6.64e-22!49;UBERON:0004121!8.97e-20!102;UBERON:0000924!8.97e-20!102;UBERON:0006601!8.97e-20!102;UBERON:0002346!9.23e-20!71;UBERON:0003075!9.23e-20!71;UBERON:0007284!9.23e-20!71;UBERON:0003080!9.34e-20!40;UBERON:0002791!1.86e-19!29;UBERON:0003528!1.86e-19!29;UBERON:0001893!1.86e-19!29;UBERON:0002780!9.46e-19!39;UBERON:0001890!9.46e-19!39;UBERON:0006240!9.46e-19!39;UBERON:0000033!5.23e-18!63;UBERON:0003056!5.61e-17!49;UBERON:0000956!1.75e-11!21;UBERON:0001869!1.75e-11!21;UBERON:0000203!1.75e-11!21;UBERON:0002420!9.54e-10!8;UBERON:0007245!9.54e-10!8;UBERON:0010009!9.54e-10!8;UBERON:0010011!9.54e-10!8;UBERON:0000454!9.54e-10!8;UBERON:0007811!1.05e-09!86;UBERON:0000153!2.06e-08!94;UBERON:0002619!2.93e-08!17;UBERON:0003076!4.35e-08!12;UBERON:0003057!4.35e-08!12;UBERON:0002240!1.36e-07!6;UBERON:0005174!1.36e-07!6;UBERON:0001137!1.36e-07!6;UBERON:0002298!5.32e-07!6;UBERON:0000369!6.62e-07!5;UBERON:0002435!6.62e-07!5;UBERON:0000204!6.62e-07!5;UBERON:0010082!6.62e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.78e-23,52;UBERON:0005068,1.78e-23,52;UBERON:0006241,1.78e-23,52;UBERON:0007135,1.78e-23,52;UBERON:0001017,6.62e-23,73;UBERON:0001016,3.24e-22,75;UBERON:0002020,5.31e-22,34;UBERON:0000073,7.73e-20,54;UBERON:0002420,6.45e-19,8;UBERON:0007245,6.45e-19,8;UBERON:0010009,6.45e-19,8;UBERON:0010011,6.45e-19,8;UBERON:0000454,6.45e-19,8;UBERON:0002346,1.52e-18,64;UBERON:0003075,1.52e-18,64;UBERON:0007284,1.52e-18,64;UBERON:0003080,2.78e-18,40;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002780,4.59e-16,39;UBERON:0001890,4.59e-16,39;UBERON:0006240,4.59e-16,39;UBERON:0010371,6.64e-16,73;UBERON:0003528,8.11e-16,29;UBERON:0002791,8.11e-16,29;UBERON:0001893,8.11e-16,29;UBERON:0002616,1.35e-15,46;UBERON:0000955,3.26e-15,47;UBERON:0006238,3.26e-15,47;UBERON:0003056,1.70e-14,49;UBERON:0000369,1.80e-14,5;UBERON:0002435,1.80e-14,5;UBERON:0000204,1.80e-14,5;UBERON:0010082,1.80e-14,5;UBERON:0010314,5.14e-12,92;UBERON:0002240,1.31e-11,6;UBERON:0005174,1.31e-11,6;UBERON:0001137,1.31e-11,6;UBERON:0002950,8.99e-10,4;UBERON:0001891,8.99e-10,4;UBERON:0009616,8.99e-10,4;UBERON:0010286,8.99e-10,4;UBERON:0000025,4.05e-09,114;UBERON:0004111,2.54e-08,122;UBERON:0001948,3.11e-08,5;UBERON:0002315,3.11e-08,5;UBERON:0002257,9.45e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,2.83243045203437,7.93486468908049,5.07065122804943,0.338844532069132,0,0,0,0,0,0.384218305321555,0.518448061542388,1.08004750665353,0.841299845405528,1.14260393761521,0.883474163806454,0.61245399607477,0.287536413054709,1.83843757322004,0,0.383062014255563,0.46081959976873,4.74790635828698,4.02545631850602,4.16730696445408,0.837548997004143,1.12552522006336,1.37518422999129,0.883885756421003,1.70846016958924,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,1.64769703345305,0.915001205637253,1.25654352112864,0.869121600961382,0.511430914660661,1.45451631191692,1.62241263067758,0,0,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.586058432961016,0,0,0,0,0.215423397732799,0,0.222798674082394,0.566153061577665,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=224 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:41254760..41254771,+ | |||
|id=chr9:41254760..41254771,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.05e-21!23;CL:0000337!3.05e-21!23;CL:0000540!1.74e-17!33;CL:0000047!1.74e-17!33;CL:0000031!1.74e-17!33;CL:0000404!1.74e-17!33;CL:0002319!7.17e-16!43;CL:0000221!2.84e-15!44;CL:0000133!2.84e-15!44;CL:0000393!2.29e-13!39;CL:0000211!2.29e-13!39;CL:0000055!3.24e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.75e-30,23;CL:0000337,8.75e-30,23;CL:0000540,4.12e-20,33;CL:0000047,4.12e-20,33;CL:0000031,4.12e-20,33;CL:0000404,4.12e-20,33;CL:0000393,1.11e-16,39;CL:0000211,1.11e-16,39;CL:0002319,6.31e-15,43;CL:0000221,1.55e-14,44;CL:0000133,1.55e-14,44;CL:0000120,1.80e-14,3;CL:0002613,2.43e-14,3;CL:0002321,2.62e-08,70;CL:0002612,9.45e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.90e-30!73;UBERON:0005743!1.90e-30!73;UBERON:0000073!3.87e-29!75;UBERON:0001016!3.87e-29!75;UBERON:0001049!2.35e-27!52;UBERON:0005068!2.35e-27!52;UBERON:0006241!2.35e-27!52;UBERON:0007135!2.35e-27!52;UBERON:0002020!1.22e-24!34;UBERON:0000955!9.48e-23!50;UBERON:0006238!9.48e-23!50;UBERON:0002616!6.64e-22!49;UBERON:0004121!8.97e-20!102;UBERON:0000924!8.97e-20!102;UBERON:0006601!8.97e-20!102;UBERON:0002346!9.23e-20!71;UBERON:0003075!9.23e-20!71;UBERON:0007284!9.23e-20!71;UBERON:0003080!9.34e-20!40;UBERON:0002791!1.86e-19!29;UBERON:0003528!1.86e-19!29;UBERON:0001893!1.86e-19!29;UBERON:0002780!9.46e-19!39;UBERON:0001890!9.46e-19!39;UBERON:0006240!9.46e-19!39;UBERON:0000033!5.23e-18!63;UBERON:0003056!5.61e-17!49;UBERON:0000956!1.75e-11!21;UBERON:0001869!1.75e-11!21;UBERON:0000203!1.75e-11!21;UBERON:0002420!9.54e-10!8;UBERON:0007245!9.54e-10!8;UBERON:0010009!9.54e-10!8;UBERON:0010011!9.54e-10!8;UBERON:0000454!9.54e-10!8;UBERON:0007811!1.05e-09!86;UBERON:0000153!2.06e-08!94;UBERON:0002619!2.93e-08!17;UBERON:0003076!4.35e-08!12;UBERON:0003057!4.35e-08!12;UBERON:0002240!1.36e-07!6;UBERON:0005174!1.36e-07!6;UBERON:0001137!1.36e-07!6;UBERON:0002298!5.32e-07!6;UBERON:0000369!6.62e-07!5;UBERON:0002435!6.62e-07!5;UBERON:0000204!6.62e-07!5;UBERON:0010082!6.62e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.78e-23,52;UBERON:0005068,1.78e-23,52;UBERON:0006241,1.78e-23,52;UBERON:0007135,1.78e-23,52;UBERON:0001017,6.62e-23,73;UBERON:0001016,3.24e-22,75;UBERON:0002020,5.31e-22,34;UBERON:0000073,7.73e-20,54;UBERON:0002420,6.45e-19,8;UBERON:0007245,6.45e-19,8;UBERON:0010009,6.45e-19,8;UBERON:0010011,6.45e-19,8;UBERON:0000454,6.45e-19,8;UBERON:0002346,1.52e-18,64;UBERON:0003075,1.52e-18,64;UBERON:0007284,1.52e-18,64;UBERON:0003080,2.78e-18,40;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002780,4.59e-16,39;UBERON:0001890,4.59e-16,39;UBERON:0006240,4.59e-16,39;UBERON:0010371,6.64e-16,73;UBERON:0003528,8.11e-16,29;UBERON:0002791,8.11e-16,29;UBERON:0001893,8.11e-16,29;UBERON:0002616,1.35e-15,46;UBERON:0000955,3.26e-15,47;UBERON:0006238,3.26e-15,47;UBERON:0003056,1.70e-14,49;UBERON:0000369,1.80e-14,5;UBERON:0002435,1.80e-14,5;UBERON:0000204,1.80e-14,5;UBERON:0010082,1.80e-14,5;UBERON:0010314,5.14e-12,92;UBERON:0002240,1.31e-11,6;UBERON:0005174,1.31e-11,6;UBERON:0001137,1.31e-11,6;UBERON:0002950,8.99e-10,4;UBERON:0001891,8.99e-10,4;UBERON:0009616,8.99e-10,4;UBERON:0010286,8.99e-10,4;UBERON:0000025,4.05e-09,114;UBERON:0004111,2.54e-08,122;UBERON:0001948,3.11e-08,5;UBERON:0002315,3.11e-08,5;UBERON:0002257,9.45e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,2.83243045203437,7.93486468908049,5.07065122804943,0.338844532069132,0,0,0,0,0,0.384218305321555,0.518448061542388,1.08004750665353,0.841299845405528,1.14260393761521,0.883474163806454,0.61245399607477,0.287536413054709,1.83843757322004,0,0.383062014255563,0.46081959976873,4.74790635828698,4.02545631850602,4.16730696445408,0.837548997004143,1.12552522006336,1.37518422999129,0.883885756421003,1.70846016958924,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,1.64769703345305,0.915001205637253,1.25654352112864,0.869121600961382,0.511430914660661,1.45451631191692,1.62241263067758,0,0,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.586058432961016,0,0,0,0,0.215423397732799,0,0.222798674082394,0.566153061577665,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.68741272937475,0.685082519770642,2.2661816921691,0,0,0.906284817968409,0,0.207574695168353,0.798049746802062,0.170733605754134,0.486213434136588,0,0.551530525350042,0.222246727801615,0.412070114477788,0.320919209591815,0,0.25347929989024,0.377252682772152,0.187283014939765,0.384150914429216,0.287177344778066,0,0.115884325944855,0,0,0,0.342869252385415,0.532427418478012,0.238436189947321,0.581385666529314,0.470546902076653,0.338458431566706,0.73171189149109,0,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0.154936841185966,0.578719832943424,0.499621155875892,0.701794825336225,0,0,0,0 | |||
|short_description=p@chr9:41254760..41254771,+ | |||
}} |
Revision as of 17:48, 14 September 2013
Short description: | p@chr9:41254760..41254771, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:41254760..41254771, + |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.75e-30 | 23 |
neuroblast (sensu Vertebrata) | 8.75e-30 | 23 |
neuron | 4.12e-20 | 33 |
neuronal stem cell | 4.12e-20 | 33 |
neuroblast | 4.12e-20 | 33 |
electrically signaling cell | 4.12e-20 | 33 |
electrically responsive cell | 1.11e-16 | 39 |
electrically active cell | 1.11e-16 | 39 |
neural cell | 6.31e-15 | 43 |
ectodermal cell | 1.55e-14 | 44 |
neurectodermal cell | 1.55e-14 | 44 |
granule cell | 1.80e-14 | 3 |
striatum neuron | 2.43e-14 | 3 |
embryonic cell | 2.62e-08 | 70 |
neuron of the ventral spinal cord | 9.45e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.