FFCP PHASE1:Hg19::chr1:223900250..223900274,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1479 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000366869_5end | |||
|coexpression_cluster_id=C2570 | |||
|description=CAGE_peak_3_at_CAPN2_5end | |||
|id=chr1:223900250..223900274,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.24e-26!679;CL:0000004!3.24e-26!679;CL:0000255!3.24e-26!679;CL:0000012!3.54e-25!682;CL:0002371!5.14e-25!591;CL:0000144!4.25e-24!625;CL:0000055!2.38e-20!180;CL:0000222!3.36e-20!119;CL:0000003!8.76e-19!722;CL:0000220!5.81e-15!246;CL:0002321!3.60e-14!248;CL:0000680!6.52e-14!57;CL:0000056!6.52e-14!57;CL:0000355!6.52e-14!57;CL:0000057!9.01e-14!75;CL:0000359!1.26e-13!32;CL:0000187!6.21e-13!54;CL:0000192!1.04e-12!42;CL:0000514!1.04e-12!42;CL:0000063!2.03e-12!578;CL:0000183!2.84e-12!59;CL:0002057!1.33e-11!42;CL:0000860!2.92e-10!45;CL:0000393!9.00e-10!60;CL:0000211!9.00e-10!60;CL:0000076!5.19e-08!62;CL:0000723!8.47e-08!436;CL:0000048!8.52e-08!430;CL:0000071!1.34e-07!18;CL:0002546!1.34e-07!18;CL:0000213!2.61e-07!57;CL:0000215!2.61e-07!57;CL:0002139!3.54e-07!24;CL:0002620!6.85e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.27e-14;33!CL:0002057;4.27e-14;33!CL:0000359;8.33e-13;32!CL:0000192;3.89e-09;43!CL:0000473;8.56e-08;39!CL:0000234;8.56e-08;39!CL:0000071;1.34e-07;18!CL:0002139;3.82e-07;24!CL:0000187;4.57e-07;55!CL:0002620;6.44e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.86e-20,121;CL:0002321,1.95e-14,250;CL:0000057,6.67e-14,76;CL:0000680,7.57e-14,58;CL:0000056,7.57e-14,58;CL:0000355,7.57e-14,58;CL:0000359,1.22e-13,32;CL:0000187,7.18e-13,55;CL:0000192,1.32e-12,43;CL:0000514,1.32e-12,43;CL:0000860,1.29e-11,42;CL:0002057,1.29e-11,42;CL:0000393,9.96e-10,61;CL:0000211,9.96e-10,61;CL:0000723,2.79e-08,433;CL:0000048,3.00e-08,427;CL:0000076,3.36e-08,63;CL:0000473,6.95e-08,48;CL:0000234,6.95e-08,48;CL:0000071,1.31e-07,18;CL:0002546,1.31e-07,18;CL:0000213,1.57e-07,58;CL:0000215,1.57e-07,58;CL:0002139,3.48e-07,24;CL:0002620,6.74e-07,23;CL:0000034,9.26e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;3.89e-09;43!CL:0002057;6.07e-09;42!CL:0002546;1.34e-07;18!CL:0000355;2.03e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!2.59e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.28e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.54e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000926!2.43e-19!448;UBERON:0004120!2.43e-19!448;UBERON:0006603!2.43e-19!448;UBERON:0002049!9.64e-18!79;UBERON:0007798!9.64e-18!79;UBERON:0001981!1.19e-17!60;UBERON:0007500!1.19e-17!60;UBERON:0004537!1.19e-17!60;UBERON:0006965!1.19e-17!60;UBERON:0000914!1.38e-17!83;UBERON:0002329!1.38e-17!83;UBERON:0003077!1.38e-17!83;UBERON:0003059!1.38e-17!83;UBERON:0007282!1.38e-17!83;UBERON:0009618!1.38e-17!83;UBERON:0007285!1.38e-17!83;UBERON:0001637!2.07e-17!42;UBERON:0003509!2.07e-17!42;UBERON:0004572!2.07e-17!42;UBERON:0000055!1.08e-16!69;UBERON:0004872!3.27e-16!84;UBERON:0000486!3.99e-16!82;UBERON:0004290!4.00e-15!70;UBERON:0003081!2.68e-14!216;UBERON:0002204!3.76e-14!167;UBERON:0004573!2.79e-13!33;UBERON:0004571!2.79e-13!33;UBERON:0004535!3.73e-13!110;UBERON:0000467!5.49e-13!625;UBERON:0000480!5.64e-13!626;UBERON:0001009!1.22e-12!113;UBERON:0001134!4.84e-12!61;UBERON:0002036!4.84e-12!61;UBERON:0003082!4.84e-12!61;UBERON:0005256!2.22e-11!143;UBERON:0003914!2.35e-11!118;UBERON:0000490!2.84e-11!138;UBERON:0002385!2.85e-11!63;UBERON:0001015!2.85e-11!63;UBERON:0000383!2.85e-11!63;UBERON:0000468!3.47e-11!659;UBERON:0002100!9.95e-10!216;UBERON:0003102!1.86e-09!95;UBERON:0000923!7.17e-09!604;UBERON:0005291!7.17e-09!604;UBERON:0006598!7.17e-09!604;UBERON:0002532!7.17e-09!604;UBERON:0002050!9.38e-09!605;UBERON:0005423!9.38e-09!605;UBERON:0000947!3.56e-08!21;UBERON:0010191!3.56e-08!21;UBERON:0000487!6.83e-08!22;UBERON:0001986!1.34e-07!18;UBERON:0004638!1.34e-07!18;UBERON:0004852!1.34e-07!18;UBERON:0000922!1.91e-07!612;UBERON:0006914!4.86e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.93e-12;42!UBERON:0003509;1.93e-12;42!UBERON:0004572;1.93e-12;42!UBERON:0004573;3.57e-12;33!UBERON:0004571;3.57e-12;33!UBERON:0007500;8.65e-11;56!UBERON:0001981;8.65e-11;56!UBERON:0004537;8.65e-11;56!UBERON:0000055;2.08e-08;65!UBERON:0003914;2.60e-08;74!UBERON:0002049;3.40e-08;75!UBERON:0007798;3.40e-08;75!UBERON:0000947;3.50e-08;21!UBERON:0010191;3.50e-08;21!UBERON:0000487;6.90e-08;22!UBERON:0004638;1.34e-07;18!UBERON:0001986;1.34e-07;18!UBERON:0004852;1.34e-07;18!UBERON:0006914;4.53e-07;25 | |||
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| |||
|short_description=p3@CAPN2 | |||
}} |
Revision as of 00:22, 11 January 2014
Short description: | p3@CAPN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAPN2_5end |
Coexpression cluster: | C2570_mesenchymal_leiomyoma_Fibroblast_CD14_Mesothelial_Gingival_meningioma |
Association with transcript: | 0bp_to_ENST00000366869_5end |
EntrezGene: | CAPN2 |
HGNC: | 1479 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.86e-20 | 121 |
embryonic cell | 1.95e-14 | 250 |
fibroblast | 6.67e-14 | 76 |
muscle precursor cell | 7.57e-14 | 58 |
myoblast | 7.57e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.57e-14 | 58 |
vascular associated smooth muscle cell | 1.22e-13 | 32 |
muscle cell | 7.18e-13 | 55 |
smooth muscle cell | 1.32e-12 | 43 |
smooth muscle myoblast | 1.32e-12 | 43 |
classical monocyte | 1.29e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.29e-11 | 42 |
electrically responsive cell | 9.96e-10 | 61 |
electrically active cell | 9.96e-10 | 61 |
somatic stem cell | 2.79e-08 | 433 |
multi fate stem cell | 3.00e-08 | 427 |
squamous epithelial cell | 3.36e-08 | 63 |
defensive cell | 6.95e-08 | 48 |
phagocyte | 6.95e-08 | 48 |
blood vessel endothelial cell | 1.31e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.31e-07 | 18 |
lining cell | 1.57e-07 | 58 |
barrier cell | 1.57e-07 | 58 |
endothelial cell of vascular tree | 3.48e-07 | 24 |
skin fibroblast | 6.74e-07 | 23 |
stem cell | 9.26e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.54e-07 | 14 |