FFCP PHASE1:Hg19::chr11:119187829..119187847,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4162 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6934 | |||
|TSSclassifier=strong | |||
|UniProt=P43121 | |||
|association_with_transcript=0bp_to_ENST00000525555,ENST00000526190,ENST00000527913,ENST00000528502,ENST00000528533,ENST00000529686,ENST00000530006,ENST00000530706,ENST00000530937,NM_006500,uc001pwf.2_5end | |||
|coexpression_cluster_id=C3095 | |||
|description=CAGE_peak_1_at_MCAM_5end | |||
|id=chr11:119187829..119187847,- | |||
|ontology_enrichment_celltype=CL:0000115!7.42e-16!35;CL:0002139!8.16e-16!24;CL:0002078!1.54e-14!44;CL:0000071!3.28e-12!18;CL:0002546!3.28e-12!18;CL:0000213!1.48e-07!57;CL:0000215!1.48e-07!57;CL:1000413!1.49e-07!9;CL:0000066!2.01e-07!254;CL:1000449!2.55e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.77e-16;24!CL:0000115;3.33e-14;36!CL:0000071;2.21e-12;18!CL:0002078;3.97e-10;45!CL:1000449;1.05e-08;15!CL:1000413;1.17e-07;9!CL:1000497;1.23e-07;17!CL:0002518;1.23e-07;17!CL:0002681;3.73e-07;12!CL:0002584;3.73e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.23e-16,36;CL:0002139,4.70e-16,24;CL:0002078,3.57e-15,45;CL:0000071,2.17e-12,18;CL:0002546,2.17e-12,18;CL:1000449,1.04e-08,15;CL:0000213,5.26e-08,58;CL:0000215,5.26e-08,58;CL:1000413,1.18e-07,9;CL:1000497,1.22e-07,17;CL:0002518,1.22e-07,17;CL:0000066,2.78e-07,253;CL:0002681,3.63e-07,12;CL:0002584,3.63e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;2.21e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!5.99e-23!286;UBERON:0000483!1.19e-19!309;UBERON:0004111!1.74e-19!241;UBERON:0000119!3.81e-19!312;UBERON:0000468!2.13e-17!659;UBERON:0000025!5.41e-16!194;UBERON:0000481!8.68e-16!347;UBERON:0000475!2.36e-15!365;UBERON:0000064!2.61e-15!219;UBERON:0000480!4.12e-15!626;UBERON:0000467!6.00e-15!625;UBERON:0001986!3.28e-12!18;UBERON:0004638!3.28e-12!18;UBERON:0004852!3.28e-12!18;UBERON:0007023!3.54e-12!115;UBERON:0000922!1.64e-10!612;UBERON:0003914!3.03e-10!118;UBERON:0002050!6.95e-10!605;UBERON:0005423!6.95e-10!605;UBERON:0000923!1.24e-09!604;UBERON:0005291!1.24e-09!604;UBERON:0006598!1.24e-09!604;UBERON:0002532!1.24e-09!604;UBERON:0000487!5.12e-09!22;UBERON:0000055!9.63e-09!69;UBERON:0002049!1.52e-08!79;UBERON:0007798!1.52e-08!79;UBERON:0004876!4.34e-08!20;UBERON:0000080!4.38e-08!18;UBERON:0002120!4.38e-08!18;UBERON:0004875!4.38e-08!18;UBERON:0005721!4.38e-08!18;UBERON:0005754!4.38e-08!18;UBERON:0007297!4.38e-08!18;UBERON:0000063!5.93e-08!97;UBERON:0003104!6.03e-08!238;UBERON:0009142!6.03e-08!238;UBERON:0006555!7.95e-08!17;UBERON:0005103!7.95e-08!17;UBERON:0000083!7.95e-08!17;UBERON:0009201!7.95e-08!17;UBERON:0004819!7.95e-08!17;UBERON:0006553!7.95e-08!17;UBERON:0003074!7.95e-08!17;UBERON:0003060!7.95e-08!17;UBERON:0003103!1.01e-07!69;UBERON:0006914!1.05e-07!25;UBERON:0000353!1.26e-07!17;UBERON:0003915!1.49e-07!9;UBERON:0004700!1.49e-07!9;UBERON:0001917!1.49e-07!9;UBERON:0003887!2.36e-07!21;UBERON:0004211!2.55e-07!16;UBERON:0001285!2.55e-07!16;UBERON:0007684!2.55e-07!16;UBERON:0003220!2.55e-07!16;UBERON:0004208!2.55e-07!16;UBERON:0001048!2.88e-07!168;UBERON:0004121!5.17e-07!169;UBERON:0000466!5.31e-07!126;UBERON:0000062!5.98e-07!511;UBERON:0003075!9.21e-07!86;UBERON:0007284!9.21e-07!86;UBERON:0000924!9.52e-07!173;UBERON:0006601!9.52e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.21e-12;18!UBERON:0001986;2.21e-12;18!UBERON:0004852;2.21e-12;18!UBERON:0000487;2.37e-09;22!UBERON:0000353;7.26e-09;15!UBERON:0006555;1.05e-08;15!UBERON:0004819;1.05e-08;15!UBERON:0001285;1.05e-08;15!UBERON:0007684;1.05e-08;15!UBERON:0006914;8.34e-08;25!UBERON:0003915;1.17e-07;9!UBERON:0004700;1.17e-07;9!UBERON:0001917;1.17e-07;9!UBERON:0000490;1.32e-07;33!UBERON:0001225;3.73e-07;12!UBERON:0008987;3.73e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.78e-19,240;UBERON:0000483,5.02e-19,306;UBERON:0000119,1.60e-18,309;UBERON:0000025,4.89e-16,192;UBERON:0007023,4.20e-13,114;UBERON:0004638,2.17e-12,18;UBERON:0001986,2.17e-12,18;UBERON:0004852,2.17e-12,18;UBERON:0011216,6.89e-11,223;UBERON:0005423,8.11e-11,581;UBERON:0003914,1.10e-10,117;UBERON:0000922,1.35e-10,592;UBERON:0000487,2.37e-09,22;UBERON:0006555,3.10e-09,16;UBERON:0004819,3.10e-09,16;UBERON:0001048,3.18e-09,160;UBERON:0002050,5.45e-09,564;UBERON:0000353,7.09e-09,15;UBERON:0004211,1.04e-08,15;UBERON:0009773,1.04e-08,15;UBERON:0001231,1.04e-08,15;UBERON:0001285,1.04e-08,15;UBERON:0007684,1.04e-08,15;UBERON:0004208,1.04e-08,15;UBERON:0000055,2.15e-08,68;UBERON:0003103,2.66e-08,68;UBERON:0010371,3.38e-08,104;UBERON:0000923,3.91e-08,560;UBERON:0010316,3.91e-08,560;UBERON:0005291,3.91e-08,560;UBERON:0006598,3.91e-08,560;UBERON:0010317,3.91e-08,560;UBERON:0002532,3.91e-08,560;UBERON:0002049,4.01e-08,78;UBERON:0007798,4.01e-08,78;UBERON:0006914,8.37e-08,25;UBERON:0003915,1.18e-07,9;UBERON:0004700,1.18e-07,9;UBERON:0001917,1.18e-07,9;UBERON:0009569,3.12e-07,112;UBERON:0004119,3.18e-07,160;UBERON:0000925,3.18e-07,160;UBERON:0006595,3.18e-07,160;UBERON:0001225,3.63e-07,12;UBERON:0008987,3.63e-07,12;UBERON:0010314,3.68e-07,132;UBERON:0001007,5.00e-07,145;UBERON:0001555,5.00e-07,145;UBERON:0007026,5.00e-07,145;UBERON:0003075,6.66e-07,82;UBERON:0007284,6.66e-07,82;UBERON:0000489,8.67e-07,31;UBERON:0004121,8.92e-07,171;UBERON:0000924,8.92e-07,171;UBERON:0006601,8.92e-07,171 | |||
|phase1_expression=17.2594460307029,116.684785520586,18.7469357447642,115.0842931061,61.2336699365384,6.10636966870258,192.507907407916,8.84407822797563,54.8489819219661,37.8430262212324,81.642736652774,3.27662058195258,27.4317657357592,9.40624282496354,6.62794751455832,17.4804538077462,15.6700577286234,26.2911632539454,20.0052447504108,18.3450376534414,18.7680635944713,49.839300715016,32.9171385200715,47.0848022250722,66.9142269040299,5.11969818511273,3.85872770414745,4.09296062831132,0,0.383829398097213,2.16742572642506,39.5351126525939,75.6026856133408,27.7315507625091,0,0,0.587200878669695,0,0,0.434021741431704,0.223915474239924,0.32389366601898,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0.376484679085209,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,3.02699751316684,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,1.12101712596307,0.263384084775077,1.180258620683,0.786021525498329,3.49522548299166,1.00311897234407,0.651844533267181,0.946895611469467,0,1.11410456885174,2.94605907474837,1.10766947291811,0.541607727530031,1.28091319725675,0.780356085359269,0.164437904603676,0.276350017785848,0,0,0,0,0.453237370790265,1.14966148080576,0,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0.604820229674197,0.802320587350522,0.868946423296794,0,24.1452309493309,29.664114347699,5.78302643815306,10.0267582127178,26.3620664508699,4.7717156823066,16.058950719987,7.75185500745356,13.5254932452164,14.668409210752,39.4901912625604,27.3221466219407,27.0672643232633,0.324547393654683,0,0,0.238490624305342,0,0,566.671623402476,425.816124577532,784.190393131556,513.299611267001,906.957781085817,767.029100928908,563.032439850168,504.171097139361,407.70813703897,317.315140900907,59.6187389321538,31.9314284401775,229.662396152828,446.342979539885,835.256348266094,258.969212023831,264.720130326254,286.483606349572,364.893597168802,415.77835889084,651.465401416528,5.27121669744253,0,65.8502018735227,7.45457927542978,2.65924074495618,0,2.58152958673932,2.83734705758686,15.1382952038423,54.4419878221495,42.1801507793343,4.04574346019696,58.4644316782446,30.2404520759899,2.4217188423189,0.576175924479999,4.21778577300834,0.936480230490962,75.3022804438673,0.896692083310806,4.11020745253177,7.44615544093405,7.30344194851692,0,15.1086210293475,0.309977343527296,10.6920257155385,60.5803976732464,7.28129089550421,7.90479955997862,9.42682238142771,9.63412603014124,0.277064115484183,28.5335453572545,17.7762921563431,66.1047459189026,21.778979166724,50.4084876285702,20.2879519377639,3.39091041855299,70.2213164837501,5.97704669582946,16.4889945629203,10.9808945235638,32.0675031258406,17.5386609290158,16.1557615516233,5.70709371582256,1.45481451136931,174.664719518174,70.1234603664376,31.7078307620612,29.955432240311,55.9129547211211,38.1450111867375,10.1238176087564,6.22889911110981,6.85544262930159,14.9271919222133,11.8590799911545,2.55484151353081,14.0804579096834,8.36213219650751,23.4829366299217,5.10804720835177,1.44375896333917,66.4884216223923,67.939630101475,65.3139890984236,65.8455017212392,68.4141454450155,60.7412784924407,64.5841966087188,67.3039625379937,58.8663150127977,422.963075499923,330.970586176132,12.7587943512734,48.5128747572288,0,0,8.27105869353966,2.20731549707325,1.96781501668982,18.8724591328378,54.3263912772697,3.37205259772859,2.31216636546751,19.0732197026571,8.14520763275812,8.31947828223663,11.5465073620219,18.8966560109375,14.7934954737135,209.186982805796,163.89687145212,156.579167289074,0,0,0,0.468008530278475,0,55.3029620521984,69.5446010743278,40.5476778113225,17.1952363589469,20.3443756959773,40.2551813123472,0,0,1.86595303986695,0.288239906833923,0.6312121671319,18.3508914504369,22.9193055334967,30.4765362746122,42.7681115056763,122.159061331548,53.7614073540612,72.3140874555363,3.1396703616701,2.61576041299968,1.54010400223995,4.26596662000667,21.4593867511129,59.17119267892,27.6575641248265,17.6812642749322,27.2639816717871,36.8807743260523,34.6348832720929,25.4500828711503,14.650783345569,21.4042487563,38.4368697466607,30.9190995406015,11.087326221068,0,0,3.79897366491817,0,0,0,29.4738572254647,79.2547357255386,8.5582143024431,4.77778312003011,2.4657158706046,9.66929201495436,0,0.394061520403854,1.07813787429759,0.385029108839245,14.4833935806804,13.0139853857622,11.5993321916654,13.5688174920822,11.4828975297569,0.749007023947182,0,0,4.04881922673162,14.5049451107306,4.06897535549603,1.45579603071565,0.535286966391485,1.57702415033935,0,2.10662269809403,9.09630016223939,10.3473071292505,31.882828729701,26.1804219329218,2.43274120510632,14.0976833373173,9.95115929051482,0.206768026122887,0.862856803274467,0.640365346820666,0,13.3148351608398,4.23346410661552,4.21783273291921,40.5139609480485,23.014127743512,0.640695746278505,49.1238959104035,7.39928037260594,4.45254199334973,10.0236300971726,6.5697838365857,13.8794893663337,1.55776328755086,20.4530266089528,2.41718899183244,91.8319633989045,9.11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| |||
|short_description=p1@MCAM | |||
}} |
Revision as of 10:45, 11 January 2014
Short description: | p1@MCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MCAM_5end |
Coexpression cluster: | C3095_Endothelial_mature_Renal_aorta_Hepatic_melanoma_gall |
Association with transcript: | 0bp_to_ENST00000525555, ENST00000526190, ENST00000527913, ENST00000528502, ENST00000528533, ENST00000529686, ENST00000530006, ENST00000530706, ENST00000530937, NM_006500, uc001pwf.2_5end |
EntrezGene: | MCAM |
HGNC: | 6934 |
UniProt: | P43121 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.23e-16 | 36 |
endothelial cell of vascular tree | 4.70e-16 | 24 |
meso-epithelial cell | 3.57e-15 | 45 |
blood vessel endothelial cell | 2.17e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.17e-12 | 18 |
epithelial cell of nephron | 1.04e-08 | 15 |
lining cell | 5.26e-08 | 58 |
barrier cell | 5.26e-08 | 58 |
endothelial cell of artery | 1.18e-07 | 9 |
kidney cell | 1.22e-07 | 17 |
kidney epithelial cell | 1.22e-07 | 17 |
epithelial cell | 2.78e-07 | 253 |
kidney cortical cell | 3.63e-07 | 12 |
renal cortical epithelial cell | 3.63e-07 | 12 |