FFCP PHASE1:Hg19::chr17:70121709..70121718,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6662 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11204 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=383bp_to_BC018276_5end | |||
|description=CAGE_peak_2_at_SOX9_5end | |||
|id=chr17:70121709..70121718,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;2.14e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.98e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.14e-07;1!UBERON:0005754;1.14e-07;1!UBERON:0006222;2.74e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;1.17e-13;2!DOID:3908;5.66e-12;5!DOID:3905;7.60e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.04e-13,2;DOID:3908,5.78e-12,5;DOID:3905,7.69e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.49e-20!57;UBERON:0005068!2.49e-20!57;UBERON:0006241!2.49e-20!57;UBERON:0007135!2.49e-20!57;UBERON:0001017!1.77e-18!82;UBERON:0005743!2.32e-18!86;UBERON:0002020!7.00e-18!34;UBERON:0003528!7.00e-18!34;UBERON:0003075!7.63e-18!86;UBERON:0007284!7.63e-18!86;UBERON:0000073!1.04e-17!94;UBERON:0001016!1.04e-17!94;UBERON:0002791!6.63e-17!33;UBERON:0002780!8.33e-17!41;UBERON:0001890!8.33e-17!41;UBERON:0006240!8.33e-17!41;UBERON:0002346!3.42e-16!90;UBERON:0003080!4.06e-16!42;UBERON:0001893!4.25e-16!34;UBERON:0004121!6.61e-16!169;UBERON:0000481!7.19e-16!347;UBERON:0002616!1.54e-15!59;UBERON:0000955!2.26e-15!69;UBERON:0006238!2.26e-15!69;UBERON:0001869!5.54e-15!32;UBERON:0000924!6.39e-15!173;UBERON:0006601!6.39e-15!173;UBERON:0000033!9.57e-15!123;UBERON:0000153!1.33e-14!129;UBERON:0007811!1.33e-14!129;UBERON:0003056!2.94e-14!61;UBERON:0007023!2.82e-13!115;UBERON:0000475!3.02e-12!365;UBERON:0000956!2.13e-11!25;UBERON:0000203!2.13e-11!25;UBERON:0000483!7.19e-11!309;UBERON:0004111!7.62e-11!241;UBERON:0000119!1.89e-10!312;UBERON:0000477!4.08e-10!286;UBERON:0000025!8.09e-10!194;UBERON:0000922!8.16e-10!612;UBERON:0000062!1.80e-09!511;UBERON:0002619!2.14e-09!22;UBERON:0000064!4.17e-09!219;UBERON:0002050!6.27e-09!605;UBERON:0005423!6.27e-09!605;UBERON:0000923!1.26e-08!604;UBERON:0005291!1.26e-08!604;UBERON:0006598!1.26e-08!604;UBERON:0002532!1.26e-08!604;UBERON:0002308!2.12e-08!9;UBERON:0000125!2.12e-08!9;UBERON:0001950!6.25e-08!20;UBERON:0000468!7.37e-08!659;UBERON:0000467!4.06e-07!625;UBERON:0000480!5.02e-07!626;UBERON:0009663!7.30e-07!7;UBERON:0004119!8.01e-07!169;UBERON:0000925!8.01e-07!169;UBERON:0006595!8.01e-07!169;UBERON:0001007!8.15e-07!155;UBERON:0001555!8.15e-07!155;UBERON:0007026!8.15e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.17e-13;2!UBERON:0002173;1.17e-13;2!UBERON:0002186;1.17e-13;2!UBERON:0004821;2.14e-09;3!UBERON:0007499;2.14e-09;3!UBERON:0003215;2.14e-09;3!UBERON:0010368;2.14e-09;3!UBERON:0009911;2.14e-09;3!UBERON:0002299;2.14e-09;3!UBERON:0006524;2.14e-09;3!UBERON:0008874;2.14e-09;3!UBERON:0002169;2.14e-09;3!UBERON:0004894;2.14e-09;3!UBERON:0001831;1.14e-07;1!UBERON:0000998;1.14e-07;1!UBERON:0006868;1.14e-07;1!UBERON:0001567;1.14e-07;1!UBERON:0009856;3.01e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.04e-13,2;UBERON:0002173,1.04e-13,2;UBERON:0002186,1.04e-13,2;UBERON:0001017,1.29e-11,81;UBERON:0001049,5.45e-11,56;UBERON:0005068,5.45e-11,56;UBERON:0006241,5.45e-11,56;UBERON:0007135,5.45e-11,56;UBERON:0011216,1.45e-10,223;UBERON:0001016,3.31e-10,89;UBERON:0000073,1.18e-09,53;UBERON:0002616,1.18e-09,53;UBERON:0004821,1.98e-09,3;UBERON:0003215,1.98e-09,3;UBERON:0010368,1.98e-09,3;UBERON:0009911,1.98e-09,3;UBERON:0002299,1.98e-09,3;UBERON:0006524,1.98e-09,3;UBERON:0008874,1.98e-09,3;UBERON:0002169,1.98e-09,3;UBERON:0004894,1.98e-09,3;UBERON:0000955,1.29e-08,68;UBERON:0006238,1.29e-08,68;UBERON:0003075,2.48e-08,82;UBERON:0007284,2.48e-08,82;UBERON:0002780,3.56e-08,41;UBERON:0001890,3.56e-08,41;UBERON:0003080,3.56e-08,41;UBERON:0006240,3.56e-08,41;UBERON:0002346,7.59e-08,86;UBERON:0003528,8.86e-08,34;UBERON:0002020,8.86e-08,34;UBERON:0001831,1.25e-07,1;UBERON:0001567,1.25e-07,1;UBERON:0008801,1.25e-07,1;UBERON:0000998,1.42e-07,1;UBERON:0006868,1.42e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0.247532705920093,0,0,0,0,0,0,0,2.19418305034661,0.85870796139317,0.821246550437305,0.376627918784408,0.382067028739756,0.410502947249729,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.767175371061182,0,0,0.144846518960824,0,5.83961844363163,0.189069634328136,0.221729397462564,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0.439001141634502,0,0.402115889646523,0.185176890317059,0,0,1.44331342025273,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,1.54657762555539,0,1.27587750330633,0,0,0,0.36807447515742,1.00034104211935,0,0,0,0.157702415033935,0,0,0,0,0,0.737476674166813,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0.362578348774867,0.802025881213139,0.184161977871793,0.114814448164607,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0.447749509444357,0,0,0.512900250232778,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0.650060246036521,0,0.193341436584244,0,0,0,0,0,0,0.178064071293475,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0.235624804691373,0.404364963146632,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0.286822704408103,0,0,0,0.422215270595328,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,3.36942951335251,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,2.27308917445131,0.71623345421307,0,0,0,0.984685914873589,0.333926115068718,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,1.93866549219044,0.185536196323703,0,0,0,0,0.227586896570999,2.2882828526349,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0.964771509003264,0,0.442317039724898,0,0.438770794307945,0,0.139423744278603,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0.424059214301822,0.216388639742091,0,0,1.22206028986725,0,0.123563938946503,0.313265848516366,0.337005664903385,0,1.1713222286267,0,0,0.242780379534093,0,0,1.22429104652196,0,0,0,0,0.992975867626496,0.313932918407225,0,0.284609546029793,0.416024019039416,0,0.195984794828755,0.0870592065804026,0,0,0,0,0,0.290967049465258,0.353024506766001,0.90392296312213,0.822251547880505,0.19871461170299,0.189932387867636,0,0.480952921509202,0,0.19980960958213,1.15272333723285,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0.288950589901519,1.80126086612937,0.821432273351958,0,0,0,0.837847203816763,0.229160424011684,0,0,0,1.56220020209311,0.0671834724867263,0,0,0.630265458457789,1.15382201733633,0.741438982396034,0.196854963029498,0,3.97614844904652,0.544813624446302,0.160753148465019,0,0.415440338029185,0,0,0.0607495566580247,0,0.86686278029118,0.0524545881349981,0.316801009558219,2.15144807199414,0.767660789277781,0,0,0.5085370753095,0,0.864221491201268,0.326587360109409,0,0,0,0.339936274560377,0,0,3.23207390903876,0.39669780522807,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.500763722825999,0.573409195690071,0.554645257684261,0.248385611765534,0,0.124980407962107,0.303298235083296,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0.829412415681711,0.265841714557995,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0.385239660814607,0,0,0,0,0,0.179088841081487,0,0,0.530067437837643,0,0.337884881306145,0,0,0.303859956177382,1.10606748921385,0,0,0,0.982829546539238,0,0.422624246717254,0,0,0,0.567515953566836,0,0,0,0,0.646948868380091,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.321146125482298,2.8339315265117,1.27707087245721,0.615349092722265,0.252071696221718,0.207471757392654,0.645902582527404,0,0.0981477185010256,0.11796972334774,0,0.577628330751691,0,0,0,0,0.20170506870352,0.781514011233092,0,0.327543835020193,0.295712172434091,0,0.781078098613847,0.413373593002368,0.19024743058172,0,2.19303106742873,0,0,0,0,0.336283722218824,0,0,0,0.115233987555779,0.514464028312255,0.135939465953663,0.065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| |||
|short_description=p2@SOX9 | |||
}} |
Revision as of 17:07, 20 January 2014
Short description: | p2@SOX9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SOX9_5end |
Coexpression cluster: | NA |
Association with transcript: | 383bp_to_BC018276_5end |
EntrezGene: | SOX9 |
HGNC: | 11204 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.98e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.04e-13 | 2 |
alveolar duct | 1.04e-13 | 2 |
bronchiole | 1.04e-13 | 2 |
central nervous system | 1.29e-11 | 81 |
neural tube | 5.45e-11 | 56 |
neural rod | 5.45e-11 | 56 |
future spinal cord | 5.45e-11 | 56 |
neural keel | 5.45e-11 | 56 |
organ system subdivision | 1.45e-10 | 223 |
nervous system | 3.31e-10 | 89 |
regional part of nervous system | 1.18e-09 | 53 |
regional part of brain | 1.18e-09 | 53 |
pulmonary alveolus epithelium | 1.98e-09 | 3 |
alveolus | 1.98e-09 | 3 |
pulmonary lobule | 1.98e-09 | 3 |
lobule | 1.98e-09 | 3 |
alveolus of lung | 1.98e-09 | 3 |
alveolar system | 1.98e-09 | 3 |
pulmonary acinus | 1.98e-09 | 3 |
alveolar sac | 1.98e-09 | 3 |
alveolar wall | 1.98e-09 | 3 |
brain | 1.29e-08 | 68 |
future brain | 1.29e-08 | 68 |
neural plate | 2.48e-08 | 82 |
presumptive neural plate | 2.48e-08 | 82 |
regional part of forebrain | 3.56e-08 | 41 |
forebrain | 3.56e-08 | 41 |
anterior neural tube | 3.56e-08 | 41 |
future forebrain | 3.56e-08 | 41 |
neurectoderm | 7.59e-08 | 86 |
brain grey matter | 8.86e-08 | 34 |
gray matter | 8.86e-08 | 34 |
parotid gland | 1.25e-07 | 1 |
cheek | 1.25e-07 | 1 |
parotid gland primordium | 1.25e-07 | 1 |
seminal vesicle | 1.42e-07 | 1 |
seminal fluid secreting gland | 1.42e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.04e-13 | 2 |
non-small cell lung carcinoma | 5.78e-12 | 5 |
lung carcinoma | 7.69e-07 | 9 |