FFCP PHASE1:Hg19::chr19:49843537..49843640,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C615 | |||
|description=CAGE_peak_at_chr19:49843537..49843640,+ | |||
|id=chr19:49843537..49843640,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.61e-78!140;CL:0000037!3.57e-77!172;CL:0000566!3.57e-77!172;CL:0002032!3.52e-73!165;CL:0000837!3.52e-73!165;CL:0000988!7.01e-70!182;CL:0002031!3.95e-67!124;CL:0002087!8.26e-66!119;CL:0000766!2.73e-46!76;CL:0000763!7.41e-43!112;CL:0000049!7.41e-43!112;CL:0000839!1.13e-39!70;CL:0000557!8.92e-38!71;CL:0002194!8.27e-35!63;CL:0000576!8.27e-35!63;CL:0000040!8.27e-35!63;CL:0000559!8.27e-35!63;CL:0002009!2.88e-34!65;CL:0002057!2.33e-33!42;CL:0000860!7.03e-30!45;CL:0000542!5.18e-26!53;CL:0000051!5.18e-26!53;CL:0000838!2.41e-25!52;CL:0000945!6.65e-17!24;CL:0000826!6.65e-17!24;CL:0000134!7.55e-13!358;CL:0000236!5.61e-12!14;CL:0002320!7.77e-12!365;CL:0000791!2.95e-11!18;CL:0000789!2.95e-11!18;CL:0002420!2.95e-11!18;CL:0002419!2.95e-11!18;CL:0000790!2.95e-11!18;CL:0000219!1.06e-08!390;CL:0000084!3.07e-08!25;CL:0000827!3.07e-08!25;CL:0000094!3.21e-08!8;CL:0002393!5.88e-08!9;CL:0002397!5.88e-08!9;CL:0000625!2.29e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.82e-34;33!CL:0002057;4.82e-34;33!CL:0000473;4.28e-33;39!CL:0000234;4.28e-33;39!CL:0000576;5.65e-31;48!CL:0000766;7.96e-30;69!CL:0002087;8.32e-26;104!CL:0000945;1.10e-21;24!CL:0000738;2.35e-20;136!CL:0000542;4.64e-18;53!CL:0000236;4.70e-16;13!CL:0000763;1.11e-15;100!CL:0000988;8.91e-14;177!CL:0000094;4.75e-11;8!CL:0000791;7.65e-11;18!CL:0000789;7.65e-11;18!CL:0002419;7.65e-11;18!CL:0000219;1.72e-08;193!CL:0000084;7.88e-08;25!CL:0000097;8.63e-08;5!CL:0002393;1.07e-07;6!CL:0002397;1.07e-07;6!CL:0000081;1.73e-07;11!CL:0000235;6.78e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.87e-102,136;CL:0002087,3.10e-88,115;CL:0000037,4.87e-87,168;CL:0002031,5.90e-86,120;CL:0002032,8.89e-83,161;CL:0000837,8.89e-83,161;CL:0000988,9.20e-81,177;CL:0000766,1.90e-67,72;CL:0000839,6.09e-55,66;CL:0000557,8.01e-54,67;CL:0000473,1.64e-52,48;CL:0000234,1.64e-52,48;CL:0002194,8.03e-51,59;CL:0000576,8.03e-51,59;CL:0000040,8.03e-51,59;CL:0000559,8.03e-51,59;CL:0002009,1.47e-48,61;CL:0000763,4.43e-47,108;CL:0000049,4.43e-47,108;CL:0000860,6.02e-47,42;CL:0002057,6.02e-47,42;CL:0000542,9.45e-31,53;CL:0000051,9.45e-31,53;CL:0000838,7.85e-30,52;CL:0000134,1.05e-22,354;CL:0000945,5.48e-22,24;CL:0000826,5.48e-22,24;CL:0002320,1.30e-21,361;CL:0000219,8.29e-18,386;CL:0000236,1.10e-16,14;CL:0000034,2.74e-13,441;CL:0000048,2.89e-13,427;CL:0000723,1.19e-12,433;CL:0000094,4.77e-11,8;CL:0000791,6.08e-11,18;CL:0000789,6.08e-11,18;CL:0002420,6.08e-11,18;CL:0002419,6.08e-11,18;CL:0000790,6.08e-11,18;CL:0002393,1.13e-10,9;CL:0002397,1.13e-10,9;CL:0000084,7.14e-08,25;CL:0000827,7.14e-08,25;CL:0000097,8.35e-08,5;CL:0002028,8.35e-08,5;CL:0000081,1.73e-07,11;CL:0000235,7.64e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;8.37e-34;42!CL:0000051;4.64e-18;53!CL:0000049;2.16e-13;108!CL:0000790;7.65e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.47e-44!102;UBERON:0003061!4.47e-44!102;UBERON:0002193!5.62e-40!112;UBERON:0002371!5.67e-33!80;UBERON:0001474!7.10e-29!86;UBERON:0002405!2.73e-25!115;UBERON:0004765!1.12e-21!101;UBERON:0001434!1.12e-21!101;UBERON:0007023!2.31e-14!115;UBERON:0002384!7.60e-11!375;UBERON:0003081!1.87e-09!216;UBERON:0000178!3.66e-07!15;UBERON:0000179!3.66e-07!15;UBERON:0000463!3.66e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.30e-10;15!UBERON:0000179;3.30e-10;15!UBERON:0000463;3.30e-10;15!UBERON:0002390;9.03e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.07e-61,98;UBERON:0003061,1.07e-61,98;UBERON:0002193,2.36e-57,108;UBERON:0002405,2.71e-47,93;UBERON:0002371,1.00e-46,76;UBERON:0001474,7.79e-42,82;UBERON:0004765,2.39e-36,90;UBERON:0001434,9.39e-31,100;UBERON:0002384,3.93e-20,371;UBERON:0003081,8.17e-19,203;UBERON:0002204,2.73e-11,167;UBERON:0000178,3.54e-10,15;UBERON:0000179,3.54e-10,15;UBERON:0000463,3.54e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8272960126742,1.9704141467987,1.25937250101887,3.14691421479123,3.83829398097213,8.20525453575203,0,0,0,2.86628642147116,1.56386155736164,0.587200878669695,3.32397245119126,7.42014455639524,6.51032612147556,13.6588439286354,11.0123846446453,11.07574940827,16.2846027433112,13.9814099164859,12.1292030593908,7.20530014407622,13.9797081927421,5.57471467611186,6.90461741573161,5.12321413058201,5.91205574721463,5.17118521104928,5.80936215225443,9.47985406160392,14.1181754656954,9.82462140208245,6.74170453335254,12.549439587207,9.30694178520671,7.67204550958849,13.5239033076554,9.97318288108159,5.96714650745772,8.12585868160035,1.70215567407342,1.24564449799115,4.77372463987812,9.38669253156363,6.29847649644838,6.05399502633369,4.41933163185078,2.53169909952708,8.87272202510155,8.50417199860174,2.93522103711726,3.36985893439485,6.60778328502628,5.6253955343978,1.14005097496499,10.94041724595,8.03722276564389,8.79981222306614,18.0225741716503,16.011166569544,24.3236226862909,18.8186113906926,12.0698012390441,25.1197051658248,15.2648600725658,45.5370375287559,54.0258214221264,58.48780390316,5.28685314316103,1.12101712596307,1.84368859342554,1.7703879310245,9.43225830597995,4.72883447698871,2.84217042164153,1.30368906653436,3.31413464014313,3.89653456815823,6.57321695622524,2.94605907474837,3.54454231333794,2.16643091012012,5.76410938765538,4.68213651215562,6.74195408875072,5.25065033793112,4.92665245749589,2.07601188426885,2.1403266247177,4.18142095219907,1.69964014046349,1.53288197440768,3.09264700934367,4.30133476433155,0.95569624297229,0.651083453856419,1.90090408889675,2.55977702432214,3.32765189001488,1.24930726552346,3.78843603270427,0.821127996921047,5.04016858061831,6.15112450302067,6.08262496307756,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.982343066232845,0,0,0,0.174129737299267,1.06366368415092,2.8618874916641,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,1.17002132569619,1.93220510975347,0,0,0,0,0,0,6.40462209264727,19.2826070488965,9.74442143041629,8.79131715843465,15.7803041782975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1085183218262,8.03611346291402,4.21667878966063,0,0,0,0,0,0,1.79336230389644,7.68419964787516,8.84073056924021,8.47064039446339,0,0,0,0.167516265334349,0,49.434463580514,53.8490626567245,65.8920666363296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68425709716127,12.2957094466612,7.25747393063422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,2.53723804616085,3.0585488285695,7.40541343326411,5.24109906007136,3.29089818468955,2.59389324477087,3.7802200606668,4.75875105776562,0,0,0,4.27347302789153,0,0,0,1.59663497146253,0.383010740264733,2.11673582723883,3.24621940274555,0.561594356226918,0,0.156679895773023,0,0.846458889008016,0.1605880751037,0.605399121573143,1.70338495076131,1.71752672377882,1.22896305723383,0.671028323677248,0.333698283423817,2.34465714482448,0,0,0,0,0,0,0.73254089635947,0,0.222886768554957,0,0,0,0,0,0.281338832821026,0,0,0,0.796991953004279,15.1956153542131,0,0,2.70786572014353,0,0,0,4.09257896181497,0.295930216910801,38.3172947755104,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0,0,2.04386596391473,0,0.498635045700469,0,0,0,0,0.317873157960757,0,0,0,0,0,0.619202951523374,3.66618086960175,0,0,0,0.269604531922708,0,0.937057782901357,7.66310114705797,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.677386656526276,0,0.272406812223151,0,0,0,0.674921674654501,0,0,0,0.0788057072991982,0,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0.985110248992068,0,0,0.293104467356165,0,0.258565912723101,0.66116300871345,0,0,1.81538601365081,0,17.8122793799294,23.3198030251617,0.988058159489721,2.80122976276061,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0.554645257684261,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.779441235357554,0,0.981392365535065,0,0,0,0,0.746842107858986,1.89436477626897,0,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0,0,0,0.157723490002507,0,0,0,0.064229225096459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| |||
|short_description=p@chr19:49843537..49843640,+ | |||
}} |
Revision as of 00:27, 21 January 2014
Short description: | p@chr19:49843537..49843640, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49843537..49843640, + |
Coexpression cluster: | C615_CD19_Neutrophils_Eosinophils_CD4_CD8_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.07e-61 | 98 |
blood island | 1.07e-61 | 98 |
hemolymphoid system | 2.36e-57 | 108 |
immune system | 2.71e-47 | 93 |
bone marrow | 1.00e-46 | 76 |
bone element | 7.79e-42 | 82 |
skeletal element | 2.39e-36 | 90 |
skeletal system | 9.39e-31 | 100 |
connective tissue | 3.93e-20 | 371 |
lateral plate mesoderm | 8.17e-19 | 203 |
musculoskeletal system | 2.73e-11 | 167 |
blood | 3.54e-10 | 15 |
haemolymphatic fluid | 3.54e-10 | 15 |
organism substance | 3.54e-10 | 15 |