FFCP PHASE1:Hg19::chr2:12857043..12857127,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28951 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30809 | |||
|TSSclassifier=strong | |||
|UniProt=F8WA18 | |||
|association_with_transcript=0bp_to_ENST00000381465_5end | |||
|description=CAGE_peak_1_at_TRIB2_5end | |||
|id=chr2:12857043..12857127,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.41e-11!18;CL:0000789!4.41e-11!18;CL:0002420!4.41e-11!18;CL:0002419!4.41e-11!18;CL:0000790!4.41e-11!18;CL:0000838!5.62e-11!52;CL:0000542!2.92e-10!53;CL:0000051!2.92e-10!53;CL:0000084!1.45e-09!25;CL:0000827!1.45e-09!25;CL:0000236!3.66e-07!14;CL:0000625!3.77e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.73e-11;18!CL:0000789;3.73e-11;18!CL:0002419;3.73e-11;18!CL:0000084;1.58e-09;25!CL:0000236;6.80e-08;13!CL:0000625;3.51e-07;11!CL:0000542;7.38e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.18e-11,18;CL:0000789,4.18e-11,18;CL:0002420,4.18e-11,18;CL:0002419,4.18e-11,18;CL:0000790,4.18e-11,18;CL:0000838,7.60e-11,52;CL:0000542,4.26e-10,53;CL:0000051,4.26e-10,53;CL:0000084,1.86e-09,25;CL:0000827,1.86e-09,25;CL:0000236,3.54e-07,14;CL:0000625,3.65e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;3.73e-11;18!CL:0000051;7.38e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.58e-14!115;UBERON:0005743!7.30e-14!86;UBERON:0001017!8.15e-14!82;UBERON:0000073!1.67e-13!94;UBERON:0001016!1.67e-13!94;UBERON:0002616!2.68e-11!59;UBERON:0001049!4.16e-11!57;UBERON:0005068!4.16e-11!57;UBERON:0006241!4.16e-11!57;UBERON:0007135!4.16e-11!57;UBERON:0000955!5.07e-10!69;UBERON:0006238!5.07e-10!69;UBERON:0003075!3.69e-09!86;UBERON:0007284!3.69e-09!86;UBERON:0002346!1.72e-08!90;UBERON:0004121!2.18e-08!169;UBERON:0000153!2.86e-08!129;UBERON:0007811!2.86e-08!129;UBERON:0000924!5.36e-08!173;UBERON:0006601!5.36e-08!173;UBERON:0003080!1.81e-07!42;UBERON:0002780!3.52e-07!41;UBERON:0001890!3.52e-07!41;UBERON:0006240!3.52e-07!41;UBERON:0000033!4.77e-07!123 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.48e-14,114;UBERON:0001017,1.70e-13,81;UBERON:0001016,4.12e-13,89;UBERON:0001049,8.03e-11,56;UBERON:0005068,8.03e-11,56;UBERON:0006241,8.03e-11,56;UBERON:0007135,8.03e-11,56;UBERON:0003075,2.05e-10,82;UBERON:0007284,2.05e-10,82;UBERON:0000073,3.78e-10,53;UBERON:0002616,3.78e-10,53;UBERON:0000955,1.01e-09,68;UBERON:0006238,1.01e-09,68;UBERON:0002346,1.21e-09,86;UBERON:0004121,6.09e-09,171;UBERON:0000924,6.09e-09,171;UBERON:0006601,6.09e-09,171;UBERON:0010371,7.19e-08,104;UBERON:0010314,1.14e-07,132;UBERON:0002780,3.41e-07,41;UBERON:0001890,3.41e-07,41;UBERON:0003080,3.41e-07,41;UBERON:0006240,3.41e-07,41;UBERON:0011216,7.80e-07,223 | |||
|phase1_expression=7.81217030863394,7.92171938396638,10.4306259031019,10.007329835313,4.91657203870017,7.85104671690332,10.1319951267324,6.31719873426831,1.04474251279935,2.21160542851358,0.697801167972428,3.05817920982241,6.59417445571134,15.842093178886,19.552445167947,3.36162573225888,6.02694528023977,4.38186054232424,6.8310591830671,32.9964435645792,36.1081223502328,34.4800193625897,18.6053391635187,33.6711085679295,26.740582233693,0.993374274723366,1.14940825229924,1.81034797021462,8.65401409067589,9.97956435052753,7.89562228911988,7.35536979583142,5.72291245678675,1.47901604066715,9.6834000725377,7.67713855432076,2.05520307534393,5.53995408531877,8.22232234627581,16.9268479158364,1.34349284543955,2.59114932815184,1.80302897343931,0,0.755751887377619,0.727752183563449,0.232429036905685,0.822335776043652,0.929119112685311,0.863077176966451,1.2808035326455,0.47296445977717,0.689491361473237,0,0,0.188242339542605,1.09162460023138,0.449446968890169,1.83650335422542,2.24650318953266,0.639337125799041,0.329851300186716,1.39624560335142,0.852449501065388,1.45104619314292,5.10646702222026,3.73693349397345,2.26123798731069,1.5644487552606,0.217188844705117,6.65939452896706,5.15588690382591,4.43047342417238,0,0,0,0,0,0,0.285012743741249,0,0,56.3187982276233,60.0752472388345,58.7076107549946,46.9403244823158,64.463753912798,54.0267293557214,58.1719488050679,49.6107952358389,51.7983801889598,27.0129107110632,33.6400440750201,13.2171328579026,7.8471198817415,17.11996551038,53.5050574709626,64.453765090863,68.0540961688375,78.410466338228,75.613965858993,98.9505913985593,77.9306913631645,30.3036442727672,97.2199494666963,124.723582650579,68.784181396314,59.3062810329876,43.4398220849993,49.4958092857065,48.6376031303093,48.1073122320187,54.8660283699624,84.0078200201699,97.2180371386284,50.3093481577194,100.786989817305,111.678919781855,58.4475488565052,68.4915640796808,58.5975108470777,55.1262185780057,48.6357634621206,47.8669925717525,68.7118996037902,51.1438864415076,41.0563998460523,21.3703147818216,20.058014683763,27.6614611416146,26.8187552945358,12.0726154746655,18.795796590999,4.69870898099936,12.0321098552613,6.22840031531542,27.8350081467885,22.8718389042239,17.2053367238603,8.86917589850256,6.49977414129133,14.5386773802461,4.73583874780305,1.85392221392215,6.81549526674835,10.2736545006568,10.9025527625469,0.715471872916026,0.571994910780128,2.22874500797739,1.78886166630035,3.4409383804245,1.38856200643038,2.82653970962005,3.77549492588915,3.85165258716094,3.34391946458897,8.26933629341852,9.60568909254118,8.03329470635209,4.43112248820062,6.84244895146661,14.399661395342,6.61793544622564,0.81014194788176,4.01848777278359,2.02076435363553,3.71617885594963,4.5994991239765,2.84779697870439,1.46561395144326,0,7.75560528296651,3.92484646928281,6.95760732373446,6.20489507156441,8.07696002960635,8.3182620017156,8.51204117276057,14.5776176037,4.2699598291882,6.41335625884616,23.6520386903822,12.7975138466204,16.6731141175728,36.3257826347835,42.6370184115199,14.7622502055292,4.99456122928513,6.27519003698894,2.69007624993242,4.3450764498193,4.04682360920329,5.89893388149444,8.16616685019573,11.669260144618,7.95608515053394,14.2560342873846,24.7266929278557,18.2032272387605,19.4026898290384,7.57512512793298,11.6360223480927,3.3247693858102,9.65750765937843,13.4854630151569,24.4888036017753,4.99101605904093,7.71375433462106,11.1049842185655,8.68920794754204,4.80145753735044,3.7098910525838,8.24449728146013,7.44467425326359,7.59493495085698,6.9180273664451,4.29137416214995,5.79914361446486,5.4959659318396,6.74518225781567,3.32481924151213,5.08681776931463,2.70565194428616,3.27295344709002,2.29443676311203,3.41526377162867,5.56625026950238,8.59835177234436,14.823530867198,5.80337957013945,6.93456982244077,9.38697193978896,19.9404690839794,31.7710319110705,9.75172648867156,6.49691533502627,1.0647612003586,0.337169380156203,0.723033089650446,1.54411561825352,1.30727666455444,0.71181185733329,0.404493924480493,0.392442930250692,1.15424147083917,10.3341763647451,12.6217596423101,21.8134226005642,17.641045366265,3.80265104465493,7.86261773342101,10.6342183202653,13.6853560818542,1.47586126251736,6.86271241194102,2.63400684980701,2.24803506515239,0.804231779293047,2.77765335475589,7.16778271682714,16.6389565644733,4.3299402607582,21.5630553253643,5.75302601755526,6.78522304477047,7.40776820122577,7.61016608938393,14.223679163267,30.9055018354154,0.738651018262192,0.234004265139238,0.297262324577456,0.93733833986777,1.34385702559088,1.41775097242386,1.16426079513703,2.90633938513962,0.383382679165211,56.1636091201376,80.4762686880886,49.9660758453261,60.0980205748729,49.9920036368465,20.0018367020332,25.5932245124046,67.9861193818273,39.3466625852222,40.6168596178128,16.5188681814155,40.8731798661727,25.1173628933608,21.3620433728307,20.0946903149403,2.84397774667111,75.1078536288953,5.917119267892,9.30783408047047,8.32059495290929,12.8603687131071,14.1849132023278,9.32477626556348,21.1607430614058,15.1934049509604,9.87888404136923,3.25736184293735,10.6617584622764,3.95975936466715,4.22015127883421,4.35766729300147,2.59929777073348,1.2162378064119,0,0,8.62649479769697,21.8237678084816,5.70547620162874,4.63300181336253,12.328579353023,5.01370697071708,16.1402607350679,27.5843064282698,39.0285910495726,37.3478235574068,86.1380776114151,61.1657313130822,24.7452420088863,32.3306392095293,42.1039576091088,1.49801404789436,2.99161459204025,1.65766205374414,28.5871175705596,39.0133006426548,13.8345162086865,12.2702808303176,6.24501460790066,3.31175071571263,10.6598687643369,12.6397361885642,22.7407504055985,15.5209606938757,5.31380478828349,8.66535092146005,5.12613325361689,51.4957044127008,57.3049517764129,32.8761161535391,22.4342768851361,24.2271556213819,0,1.66435439510497,4.23346410661552,6.69891081110698,12.5838818096211,10.6650835884568,8.07276640310916,5.11707249066703,9.32952742632923,19.2943486378488,8.48153315914606,12.7844442225451,5.09188367285617,8.82732529612156,6.15915005837784,1.0877350463246,4.81215528727884,0.736647911487171,3.78887678943202,2.00300284807389,3.14698595902618,1.80479845162965,1.46329140498388,3.92174884588428,0,1.89992932007176,6.8240030442538,3.74206151608334,3.02282282542995,18.5072703228347,2.16757150035082,5.51858751240339,0.509752546090077,6.64860807142979,1.79099803777743,2.19259876645935,1.8300481571743,7.69350375349168,8.85639543389205,6.83294628795036,15.0439877005675,4.8531816353722,4.45551299571175,4.59412430396938,7.15066270640173,8.03419649220798,11.5038154767625,7.54838223861757,6.60065801322357,8.95937721149449,7.51941714077915,12.4714356766237,7.84084972228128,11.4851325984291,2.31398881505369,2.11409074101617,5.23212121227795,1.71968227454435,5.11330104227014,9.4443704049192,6.2733354314454,6.46870518369786,5.32306030317022,4.34966496037536,7.59829298326072,5.29562080945368,16.747126621185,9.17500331684305,6.67205678733387,7.42103594802868,16.261681545289,7.95508119814842,7.8494864019923,6.29553601541602,6.58888871366531,8.36468056654374,2.83055474202642,1.58510321173008,2.52755073743389,5.36397112998549,6.82397770967596,10.5650146756755,3.27599787379166,4.3835683905651,16.9512174930364,2.75682671773062,9.95158462861829,5.69986150829892,7.52408194546694,22.3004215695855,2.43492452355245,6.50629346009475,8.73256367849948,5.44963138375396,1.96498082026242,3.21003946333125,1.77380532035299,2.32218398827431,1.97576935775941,21.6299709046458,27.2949081791087,2.21310859268678,8.71392958196524,6.53345909167936,14.1215701165169,3.44404298136984,3.36942951335251,2.66058092122005,2.75668080248351,24.3574852431441,15.2927441428475,29.6216537330565,28.8260448303925,27.1499100236888,25.9389324477087,21.0612260522865,34.1043825806536,2.02965735142199,29.8368755131641,0.735120647943095,0.557409525377156,10.9644601862098,9.10615594859701,32.0446808184933,4.19116680008915,6.12817184423573,20.1089903587689,2.921597462471,0.280797178113459,1.59764275323235,0.313359791546046,0,7.78742177887375,0.481764225311099,0,0.851692475380653,5.49608551609224,0,0,0.500547425135725,7.62013572067957,20.6020568682479,35.6953456948366,8.92503738970744,0.99921590399346,40.8862314754764,13.6612594498,18.4600305882586,0.121360521749513,2.67464122265948,7.10340367016033,0,3.8605408508243,0.307160702099232,10.9356241254293,13.2229251425882,10.4630182721532,32.6311670968984,0,16.5375830248388,17.6821705939935,0.251932747854276,10.8404803452284,0.123084805461069,12.7526230941341,3.23526064130377,19.5133080396414,0,12.5277125158906,31.1328020051022,2.22273980289274,19.3866549219044,7.2359116566244,53.8957254603224,0.260427761085233,16.3550199992886,21.7499872630438,8.30692172484147,17.0349945696153,1.18193840883968,16.5476819155903,10.7893706951804,10.5911246909308,4.42870692906919,10.8536794762867,36.6196167161,31.7362476002615,22.4616190404696,11.4080406520066,0,1.81250867562184,11.6964392925772,6.60863923912607,0.23056390438806,0,0,0.31900115973192,5.22106282390615,1.5991043280559,7.15353087370155,5.65128923022089,32.909913016231,6.31667849728106,9.01887657861602,7.38414982693708,16.8880822124525,19.708135793567,0.210998064528027,0,0,15.5799820614306,4.97630965539252,9.0226715793406,14.664723478407,2.6686901581256,4.3247378631276,3.55034628318548,9.84056541517885,19.2618635351709,7.26219781748551,24.9963061225462,3.7176277597097,19.4224303627274,6.31335044559025,24.1981432097328,23.8736754071782,14.1537938367813,4.20905574360579,8.29505531177977,7.97584647248622,5.62686324988348,5.33685961292283,3.58417289318877,0,10.5392751489985,1.90915712168644,0.783939179315021,0.522355239482415,10.1341467580377,12.3829943379564,0,0,0.0821154570532092,7.08019820365462,0,36.3828992656657,5.07055121192978,4.57043606916876,11.3326324761023,2.54216797555244,3.76746455182208,12.5937266896218,5.59466906829965,3.02589876023623,0,0.514784993585894,5.90624671751414,3.97608113809384,2.12124631155116,2.8539883275459,1.77824838730966,8.46585206381471,0.577901179803038,12.0084057741958,10.2679034168995,2.55493176133945,8.16554338697919,19.9794389252279,17.594791280152,12.6038233206426,39.4830163517248,9.58459202395157,15.02291168478,13.6134589039542,17.8036202089825,11.1692963898145,1.16495949527454,0.945398187686684,0.988990300573997,0.539228350833479,3.93709926058995,20.9143130202488,8.74752658790234,18.932273449509,24.916738012078,19.8056788700017,16.2021731831382,3.37460837327251,0,15.4303873911383,2.68347750079413,12.9241359970685,46.4747650876083,2.42880773994635,3.22717210799121,0.383830394638891,11.4351252219739,11.2555634962123,23.392705464237,5.97299561929084,3.45688596480507,3.5924609612035,1.19730191562487,13.9557285273876,13.1198776774775,12.577642158734,4.83622371137672,17.2258955585888,12.4111638107089,17.4547034300351,0,16.9155605356001,14.4163006966388,22.0086027139532,16.5695622138878,17.3658107634183,0.790446527591777,4.14094834495046,7.021753835472,2.72008901684737,6.0165574565448,2.75711019087115,2.62298104567844,0.785270481251171,12.4049545195378,12.2026264901963,13.8961933084215,12.0415931094915,14.7535638544014,13.2265338265147,6.77908311187531,16.8723550748844,42.0068055590364,21.9808306829625,4.70531639396343,2.81000943484129,12.8979715463634,4.17913448083247,3.03827302801392,5.54805861502613,6.06089616880285,9.55958026659785,4.44905610798268,3.43260102595385,9.98124096837378,10.8806040407946,6.80133689952316,5.41609008356588,8.54625913110849,4.50262574941152,13.6853048587482,3.45594228925393,5.73919567992907,3.90669783392768,4.56966254602554,2.03435366602331,13.8204980993945,7.4113284359317,8.81664143769138,7.5638218852737,2.80019435264208,6.18112269329027,4.37774335395695,32.8080735394493,0,0.428883182749851,0,0.226705925512272,0.694567422971502,3.42631386309055,0.895444205407437,1.85280868296583,1.31570429747224,3.18040462702586,1.3503982678964,4.39250345697989,0.76872455576384,0,1.51929978088691,13.8258436151731,0.779441235357554,0.398594520940089,1.79921933681429,4.25892803500336,3.68659363130579,5.28280308396568,0.999936979274649,4.16097745807149,0.172214979660816,3.40509572140102,4.41854280604418,0.699397538597222,4.35454082023081,14.8357470712236,49.1681139968869,5.18977608124458,36.0391806033646,5.26170842857478,3.61377364172861,15.2440990038573,23.4630865548762,5.0880696104547,11.513814770183,65.6468013594085,18.6918250156062,11.6373281394216,10.6620513660123,17.0035891590702,15.6441181876008,18.4604727816679,27.9799582806107,14.7304947748784,14.048381169971,5.71077681036618,0.0981477185010256,4.48284948721413,5.13600075860701,0.346576998451015,8.77178819574484,4.8325194824207,25.6601926529994,19.7051060275054,1.21023041222112,8.59665412356402,0,6.87842053542406,7.54066039706931,13.3724417544421,14.0594057750493,11.1610870110639,15.9807841688645,28.9896648779656,12.6099286377152,10.9166459245645,1.40696995487696,6.13259652670057,25.7136881221578,34.6372233885389,9.71144966778611,11.8384339502675,10.9103915300046,4.49412551467539,34.1261138780463,9.03997448591862,14.7331012780782,0.118193840883968,12.6803798156959,14.1287567130925,6.12750800672407,0,26.4816028947754,1.51149313853035,0.9555033757741,22.1577286947635,4.10835390505089,0,10.4314963381548,4.00855682365126,10.5680243723149,4.7801173586306,3.45629830907046,9.03477453522583,2.01164401241961,1.53384128566484,9.31451510420044,8.93516787321795,7.755159641608,3.82215575590973,0.223710863595585,8.04831915644992,6.82740379900709,3.88457302312737,6.05710560451857,27.8355463521168,7.28566489588709,10.2933363923326,8.7538341071002,0,11.7463925320518,11.4338137415246,43.7792246343353,5.32501690944818,12.2393353882216,0,15.9346409140039,12.9622100905894,14.330518099391,11.5848096127564,43.9561956686736,5.60759478469796,25.6576096085,42.6066639505345,0.299823467774787,4.82095634235275,0.352894871715692,0.802413666891683,16.0674005414234,14.2206077855408,15.4806749803567,0,15.2300938027649,31.4172497045072,12.6966441723696,14.8798007266701,14.327444487574,5.19151874548547,12.6166424835079,9.61537033280521,81.7205331523769,3.77358670045332,6.68043513163901,8.45433075720573,1.50424523575425,12.0488130167001,11.5224575967157,16.5833887891756,10.3432995861895,7.03672140273237,19.7593478114904,38.6241680819316,32.5271502910295,5.60659312903067,8.3377777344396,20.4138360847801,5.22520194952707,15.0582652477524,24.3814431912807,16.5678294457082,21.6229231754909,12.861716440534,0,3.8614456457388,8.44356899801917,14.0784565442073,13.0798345275667,27.2620439471545,21.3042167739364,23.7503076437411,1.60284246151616 | |||
|short_description=p1@TRIB2 | |||
}} |
Revision as of 01:47, 21 January 2014
Short description: | p1@TRIB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000381465_5end |
EntrezGene: | TRIB2 |
HGNC: | 30809 |
UniProt: | F8WA18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.18e-11 | 18 |
alpha-beta T cell | 4.18e-11 | 18 |
immature T cell | 4.18e-11 | 18 |
mature T cell | 4.18e-11 | 18 |
immature alpha-beta T cell | 4.18e-11 | 18 |
lymphoid lineage restricted progenitor cell | 7.60e-11 | 52 |
lymphocyte | 4.26e-10 | 53 |
common lymphoid progenitor | 4.26e-10 | 53 |
T cell | 1.86e-09 | 25 |
pro-T cell | 1.86e-09 | 25 |
B cell | 3.54e-07 | 14 |
CD8-positive, alpha-beta T cell | 3.65e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.48e-14 | 114 |
central nervous system | 1.70e-13 | 81 |
nervous system | 4.12e-13 | 89 |
neural tube | 8.03e-11 | 56 |
neural rod | 8.03e-11 | 56 |
future spinal cord | 8.03e-11 | 56 |
neural keel | 8.03e-11 | 56 |
neural plate | 2.05e-10 | 82 |
presumptive neural plate | 2.05e-10 | 82 |
regional part of nervous system | 3.78e-10 | 53 |
regional part of brain | 3.78e-10 | 53 |
brain | 1.01e-09 | 68 |
future brain | 1.01e-09 | 68 |
neurectoderm | 1.21e-09 | 86 |
ectoderm-derived structure | 6.09e-09 | 171 |
ectoderm | 6.09e-09 | 171 |
presumptive ectoderm | 6.09e-09 | 171 |
ecto-epithelium | 7.19e-08 | 104 |
structure with developmental contribution from neural crest | 1.14e-07 | 132 |
regional part of forebrain | 3.41e-07 | 41 |
forebrain | 3.41e-07 | 41 |
anterior neural tube | 3.41e-07 | 41 |
future forebrain | 3.41e-07 | 41 |
organ system subdivision | 7.80e-07 | 223 |