FFCP PHASE1:Hg19::chr3:42306471..42306490,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_BC028133_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_BC028133_5end | |||
|id=chr3:42306471..42306490,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.15e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;1.87e-07;2!DOID:962;1.87e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,1.75e-07,2;DOID:962,1.75e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.61e-53!34;UBERON:0002619!6.54e-52!22;UBERON:0001869!3.43e-51!32;UBERON:0002791!2.82e-49!33;UBERON:0002780!1.22e-48!41;UBERON:0001890!1.22e-48!41;UBERON:0006240!1.22e-48!41;UBERON:0002020!9.64e-48!34;UBERON:0003528!9.64e-48!34;UBERON:0003080!2.09e-47!42;UBERON:0000956!1.52e-45!25;UBERON:0000203!1.52e-45!25;UBERON:0001049!1.92e-45!57;UBERON:0005068!1.92e-45!57;UBERON:0006241!1.92e-45!57;UBERON:0007135!1.92e-45!57;UBERON:0001950!8.32e-43!20;UBERON:0002616!7.57e-40!59;UBERON:0001017!6.15e-39!82;UBERON:0002346!1.94e-38!90;UBERON:0005743!6.45e-37!86;UBERON:0000955!2.65e-36!69;UBERON:0006238!2.65e-36!69;UBERON:0000073!6.76e-36!94;UBERON:0001016!6.76e-36!94;UBERON:0007023!2.67e-34!115;UBERON:0003075!2.89e-34!86;UBERON:0007284!2.89e-34!86;UBERON:0003056!1.62e-31!61;UBERON:0000349!6.09e-28!5;UBERON:0001871!1.58e-24!7;UBERON:0000200!6.66e-23!6;UBERON:0000924!1.94e-20!173;UBERON:0006601!1.94e-20!173;UBERON:0000033!2.38e-20!123;UBERON:0000153!3.53e-19!129;UBERON:0007811!3.53e-19!129;UBERON:0004121!9.27e-18!169;UBERON:0002771!8.83e-17!3;UBERON:0001876!2.02e-12!2;UBERON:0001954!3.96e-12!2;UBERON:0003022!3.96e-12!2;UBERON:0002421!3.96e-12!2;UBERON:0002600!3.96e-12!2;UBERON:0002360!1.19e-11!2;UBERON:0000094!1.19e-11!2;UBERON:0007645!1.19e-11!2;UBERON:0000025!4.01e-11!194;UBERON:0001872!6.26e-11!5;UBERON:0002420!4.16e-10!9;UBERON:0007245!4.16e-10!9;UBERON:0010009!4.16e-10!9;UBERON:0010011!4.16e-10!9;UBERON:0000454!4.16e-10!9;UBERON:0004111!6.86e-09!241;UBERON:0000119!6.29e-08!312;UBERON:0000477!1.77e-07!286;UBERON:0000483!2.87e-07!309;UBERON:0002022!3.73e-07!1;UBERON:0002902!3.95e-07!1;UBERON:0009899!3.95e-07!1;UBERON:0007190!4.18e-07!1;UBERON:0002581!4.43e-07!1;UBERON:0001882!6.99e-07!1;UBERON:0005403!6.99e-07!1;UBERON:0003112!7.39e-07!1;UBERON:0000032!7.39e-07!1;UBERON:0005253!7.39e-07!1;UBERON:0003128!7.39e-07!1;UBERON:0002241!7.39e-07!1;UBERON:0001703!7.39e-07!1;UBERON:0004761!7.39e-07!1;UBERON:0009617!7.39e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.73e-64;22!UBERON:0001950;4.56e-58;20!UBERON:0000956;1.83e-56;25!UBERON:0000203;1.83e-56;25!UBERON:0001869;1.99e-55;32!UBERON:0001893;8.85e-54;34!UBERON:0002791;2.08e-46;32!UBERON:0003528;1.01e-44;34!UBERON:0002020;1.01e-44;34!UBERON:0002780;5.52e-32;41!UBERON:0001890;5.52e-32;41!UBERON:0001872;6.33e-23;5!UBERON:0000349;6.33e-23;5!UBERON:0000073;1.79e-19;53!UBERON:0002616;1.79e-19;53!UBERON:0000200;3.20e-19;6!UBERON:0001871;9.32e-17;6!UBERON:0001017;1.08e-15;75!UBERON:0000955;6.11e-15;68!UBERON:0001016;2.86e-14;83!UBERON:0002902;4.53e-14;1!UBERON:0002022;4.53e-14;1!UBERON:0009899;4.53e-14;1!UBERON:0007190;4.53e-14;1!UBERON:0002581;1.25e-13;1!UBERON:0001882;1.25e-13;1!UBERON:0005403;1.25e-13;1!UBERON:0002021;5.85e-11;5!UBERON:0007023;6.16e-09;114!UBERON:0001876;1.12e-07;2!UBERON:0002771;1.87e-07;2!UBERON:0002360;1.87e-07;2!UBERON:0001954;1.87e-07;2!UBERON:0003714;1.87e-07;2!UBERON:0000094;1.87e-07;2!UBERON:0003022;1.87e-07;2!UBERON:0002421;1.87e-07;2!UBERON:0002600;1.87e-07;2!UBERON:0010743;1.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.01e-64,22;UBERON:0001869,5.58e-62,32;UBERON:0001893,2.30e-58,34;UBERON:0001950,3.19e-58,20;UBERON:0000956,1.33e-56,25;UBERON:0000203,1.33e-56,25;UBERON:0002791,1.06e-52,32;UBERON:0003528,1.28e-49,34;UBERON:0002020,1.28e-49,34;UBERON:0002780,2.04e-48,41;UBERON:0001890,2.04e-48,41;UBERON:0003080,2.04e-48,41;UBERON:0006240,2.04e-48,41;UBERON:0000073,2.36e-37,53;UBERON:0002616,2.36e-37,53;UBERON:0001049,2.59e-35,56;UBERON:0005068,2.59e-35,56;UBERON:0006241,2.59e-35,56;UBERON:0007135,2.59e-35,56;UBERON:0000955,3.49e-33,68;UBERON:0006238,3.49e-33,68;UBERON:0001016,8.24e-33,89;UBERON:0003056,2.37e-32,61;UBERON:0001017,5.79e-32,81;UBERON:0003075,8.55e-24,82;UBERON:0007284,8.55e-24,82;UBERON:0001872,4.36e-23,5;UBERON:0000349,6.83e-23,5;UBERON:0007023,7.77e-23,114;UBERON:0002346,1.24e-22,86;UBERON:0000200,3.41e-19,6;UBERON:0010371,1.73e-18,104;UBERON:0001871,8.84e-17,6;UBERON:0004121,1.46e-16,171;UBERON:0000924,1.46e-16,171;UBERON:0006601,1.46e-16,171;UBERON:0010314,2.92e-14,132;UBERON:0002022,5.15e-14,1;UBERON:0002902,5.85e-14,1;UBERON:0009899,5.85e-14,1;UBERON:0007190,6.65e-14,1;UBERON:0002581,7.55e-14,1;UBERON:0001882,2.07e-13,1;UBERON:0005403,2.07e-13,1;UBERON:0011216,2.82e-12,223;UBERON:0002021,5.85e-11,5;UBERON:0000025,2.64e-09,192;UBERON:0001876,9.25e-08,2;UBERON:0003714,1.75e-07,2;UBERON:0001954,1.87e-07,2;UBERON:0003022,1.87e-07,2;UBERON:0002421,1.87e-07,2;UBERON:0002600,1.87e-07,2;UBERON:0002771,2.12e-07,2;UBERON:0002360,2.25e-07,2;UBERON:0000094,2.25e-07,2;UBERON:0010743,2.25e-07,2;UBERON:0004111,4.22e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94813006139888,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91229661397042,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.544813624446302,0,0,0,0,0,2.61223093629506,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34228891392159,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509197589862076,0.212574920101683,0,1.67593475391973,0,0,0,0,0,1.15612605173627,0,0,1.8460472781668,0,2.55881834117606,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36381546164381,1.56215619722769,0,2.98054307911362,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97318320688547,0,0,0.235479278551542,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,2.65166811744567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@BC028133 | |||
}} |
Revision as of 18:24, 21 January 2014
Short description: | p3@BC028133 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BC028133_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_BC028133_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 1.75e-07 | 2 |
neurofibroma | 1.75e-07 | 2 |