FFCP PHASE1:Hg19::chr4:8160512..8160582,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84448 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19195 | |||
|TSSclassifier=strong | |||
|UniProt=F8W6D8,E7EPT1,F5GYR0,F5GZL6,E9PF39,Q6H8Q1,Q19VH0,Q08E71 | |||
|association_with_transcript=0bp_to_ENST00000296372,ENST00000318888,ENST00000361737,ENST00000400045,ENST00000428004,ENST00000502800,ENST00000545242,ENST00000546334,NM_001130083,NM_001130084,NM_001130085,NM_001130086,NM_001130087,NM_001130088,NM_032432,uc003gkj.3,uc003gkm.3,uc003gko.2,uc003gkp.2,uc003gkq.2,uc003gkr.2,uc003gks.3_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_ABLIM2_5end | |||
|id=chr4:8160512..8160582,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.77e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.20e-45!115;UBERON:0001049!1.15e-25!57;UBERON:0005068!1.15e-25!57;UBERON:0006241!1.15e-25!57;UBERON:0007135!1.15e-25!57;UBERON:0001017!3.71e-23!82;UBERON:0005743!4.85e-23!86;UBERON:0002616!5.05e-22!59;UBERON:0003080!1.96e-21!42;UBERON:0002780!5.62e-21!41;UBERON:0001890!5.62e-21!41;UBERON:0006240!5.62e-21!41;UBERON:0000955!8.04e-21!69;UBERON:0006238!8.04e-21!69;UBERON:0000073!3.89e-20!94;UBERON:0001016!3.89e-20!94;UBERON:0002346!5.08e-19!90;UBERON:0003075!1.31e-17!86;UBERON:0007284!1.31e-17!86;UBERON:0001893!1.41e-17!34;UBERON:0002020!1.80e-17!34;UBERON:0003528!1.80e-17!34;UBERON:0002791!6.95e-17!33;UBERON:0001869!1.63e-16!32;UBERON:0002619!3.30e-14!22;UBERON:0001950!3.88e-13!20;UBERON:0003056!1.57e-12!61;UBERON:0000956!2.69e-12!25;UBERON:0000203!2.69e-12!25;UBERON:0000153!2.04e-11!129;UBERON:0007811!2.04e-11!129;UBERON:0000033!9.73e-11!123;UBERON:0000924!9.87e-10!173;UBERON:0006601!9.87e-10!173;UBERON:0004111!3.97e-09!241;UBERON:0000477!7.38e-09!286;UBERON:0004121!8.54e-09!169;UBERON:0000025!1.77e-07!194;UBERON:0002420!7.47e-07!9;UBERON:0007245!7.47e-07!9;UBERON:0010009!7.47e-07!9;UBERON:0010011!7.47e-07!9;UBERON:0000454!7.47e-07!9;UBERON:0002308!9.61e-07!9;UBERON:0000125!9.61e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.48e-19;41!UBERON:0001890;1.48e-19;41!UBERON:0001893;3.52e-19;34!UBERON:0002619;7.83e-19;22!UBERON:0003528;8.44e-19;34!UBERON:0002020;8.44e-19;34!UBERON:0001869;1.13e-18;32!UBERON:0002791;1.78e-18;32!UBERON:0000073;2.16e-18;53!UBERON:0002616;2.16e-18;53!UBERON:0001950;2.10e-17;20!UBERON:0000956;2.00e-15;25!UBERON:0000203;2.00e-15;25!UBERON:0007023;3.81e-15;114!UBERON:0000955;6.35e-13;68!UBERON:0001017;4.38e-12;75!UBERON:0001016;2.97e-10;83!UBERON:0002420;1.36e-08;9!UBERON:0007245;1.36e-08;9!UBERON:0010009;1.36e-08;9!UBERON:0010011;1.36e-08;9!UBERON:0000454;1.36e-08;9!UBERON:0000125;1.86e-08;9!UBERON:0002308;1.86e-08;9!UBERON:0009663;6.28e-07;7!UBERON:0000200;6.62e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.81e-55,114;UBERON:0001049,5.85e-33,56;UBERON:0005068,5.85e-33,56;UBERON:0006241,5.85e-33,56;UBERON:0007135,5.85e-33,56;UBERON:0000073,6.37e-31,53;UBERON:0002616,6.37e-31,53;UBERON:0001017,5.43e-28,81;UBERON:0002780,7.13e-27,41;UBERON:0001890,7.13e-27,41;UBERON:0003080,7.13e-27,41;UBERON:0006240,7.13e-27,41;UBERON:0000955,6.61e-26,68;UBERON:0006238,6.61e-26,68;UBERON:0001016,1.48e-24,89;UBERON:0002346,2.36e-24,86;UBERON:0003075,1.77e-22,82;UBERON:0007284,1.77e-22,82;UBERON:0001893,2.28e-22,34;UBERON:0003528,3.13e-22,34;UBERON:0002020,3.13e-22,34;UBERON:0001869,5.80e-21,32;UBERON:0002791,1.07e-20,32;UBERON:0002619,8.56e-19,22;UBERON:0011216,1.12e-17,223;UBERON:0010371,1.53e-17,104;UBERON:0001950,2.23e-17,20;UBERON:0003056,1.59e-16,61;UBERON:0000956,2.14e-15,25;UBERON:0000203,2.14e-15,25;UBERON:0004121,3.78e-13,171;UBERON:0000924,3.78e-13,171;UBERON:0006601,3.78e-13,171;UBERON:0010314,3.84e-13,132;UBERON:0004111,1.44e-11,240;UBERON:0000025,2.90e-10,192;UBERON:0002420,1.43e-08,9;UBERON:0007245,1.43e-08,9;UBERON:0010009,1.43e-08,9;UBERON:0010011,1.43e-08,9;UBERON:0000454,1.43e-08,9;UBERON:0000125,2.00e-08,9;UBERON:0002308,2.00e-08,9;UBERON:0003076,2.10e-07,15;UBERON:0003057,2.10e-07,15;UBERON:0009663,6.57e-07,7;UBERON:0000200,6.86e-07,6 | |||
|phase1_expression=0.908391896352783,3.63970890614671,0.704772020479856,0,0,1.74467704820074,7.59899634504932,0.631719873426831,2.35067065379855,0.245733936501509,1.39560233594486,0,0,0.37129905888014,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0,0.376627918784408,0.152826811495903,0.328402357799783,0.314843125254717,0.393364276848904,0,0.309632246632152,1.83884244895785,0,0,1.54934401160603,1.27952309238679,0,0,0.802177789880567,0.651032612147555,0.671746422719773,1.29557466407592,0.257575567634187,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0.32145117339416,0.285012743741249,0.39783335439818,0.365328307529268,5.27988733383968,1.09227722252426,1.77901850772711,2.56038133539904,2.00197993518006,1.14950487990897,1.32208974556972,2.86216126360609,2.27685187643779,0.587237189370939,1.52909291250092,0,0,0,2.360517241366,2.35806457649499,1.85041349099558,0.167186495390678,1.62961133316795,2.36723902867367,1.94826728407911,0.111410456885174,0.883817722424512,0.443067789167242,1.08321545506006,0.128091319725675,0.260118695119756,0,0.276350017785848,0,1.92772532110679,0.802622484269139,1.04535523804977,0.453237370790265,0,1.03088233644789,0.506039384039006,1.27426165729639,1.30216690771284,0,1.05402583354441,1.91979916731628,1.24930726552346,0.710331756132051,0,2.01606743224732,2.67440195783507,1.73789284659359,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0,0.087834785693126,6.28699562389021,2.18577172975525,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0.347140501607594,1.13061588384802,0.419499436209906,0,0,3.10100111003195,0.35576626268671,0.33472061276467,1.61131726843659,2.28081631715554,5.6134273236079,0.367663080345869,0,0.357198913136319,1.12264686313085,1.57656072676651,0,0.949265659568129,0.549605231791222,0,0,0.436094052142534,0,0,0,0,0,1.12135520028461,0,0.49333509683432,0,0.404132016209064,0,0.454072282934794,0,0,1.5608003841516,0,0,0,0.161872944368132,0,0,0,0,0,0,1.82032272387605,1.43723628363248,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,1.73934767846967,2.18196896472668,1.72082757233402,0.975789649036763,0.795178609928912,0.348581828608555,0.621966330092223,0,0.36497735907583,0,0,0,0,0,0.946454400318751,1.18009283054671,0.482022059766964,1.98529150918309,0.871517776369625,2.60997681022206,1.07865046528132,0.98110732562673,2.69323009862473,0,0,1.6462960453256,1.47008711385542,1.26755034821831,1.96565443335525,2.36315962672562,1.32438929824395,0.368965315629341,0,0.658501712451753,0,0.502644862058154,0.0925884451585296,0,0,0,0.34779121492523,0,2.88732895522148,7.40776820122577,3.61482889245737,6.3216351836742,3.43394464837949,0,0.234004265139238,0,0.93733833986777,0.335964256397719,1.55952606966625,0.0895585227028483,0,0,0,0,0.829312462163088,0.576479813667846,0.37872730027914,0.126995788584338,0,0,1.71072446022705,0.205654985406647,0.300343057843917,0,0.224262168690721,0,0,0,0,0.845302752556,0,0,0.257207374262142,0,0,0.714889968290738,0,0,0.65147236858747,2.13235169245527,0,0,0,0.399891964728228,1.2162378064119,0,0,0,0,0,0.289562613335158,0.205476322550383,0.537182889719687,0.224170287987055,1.18218456121156,1.2937654491571,1.41177339907723,0.76228387266739,1.30139853857622,0,1.84267891867784,1.27587750330633,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.234282829985426,0,0,1.03473071292505,0,0,0,0.391602314925481,0,1.03384013061444,1.07857100409308,0.960548020230999,0,0,0,0,0.153461973288062,0,0.256278298511402,1.02341449813341,0.160853921143607,2.96836132889982,0.154209693802656,0,0,0,0,0.483437798366489,0,1.65745780084613,0,0,0.262248829918848,1.35359883872224,0.693138033939733,0,0,0.211103257785751,1.13733384070897,0.340187410553031,0.215915916102139,0,0.541892875087706,1.50506932156456,1.78413391131527,4.15538004464362,0.447749509444357,0,0,0.512900250232778,0.328014645699706,0.325378394664303,2.57602529119306,0.54941678891006,1.15513299888823,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0,0.0852266274161009,0.979352392114111,0.165284915360978,0.192190067365106,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0.632758849437452,2.47819252100972,0,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0,0.35667105148125,0,1.26664581178598,0.658589785919804,0.379473173765715,0,0.384888450902048,0.670302275535787,0,1.7887322147588,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0,0,1.42939065274673,0.411362273086194,0.648473311192717,1.08006287447623,0.79312517629427,0.213648142254946,0,1.22520107990516,0.185803175125719,0,1.70740424036194,1.27541018183058,0,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0,0,0.169291777801603,1.76646882614069,0,0,0.343505344755765,0.614481528616916,0.223676107892416,0.66739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| |||
|short_description=p1@ABLIM2 | |||
}} |
Revision as of 00:09, 22 January 2014
Short description: | p1@ABLIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABLIM2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000296372, ENST00000318888, ENST00000361737, ENST00000400045, ENST00000428004, ENST00000502800, ENST00000545242, ENST00000546334, NM_001130083, NM_001130084, NM_001130085, NM_001130086, NM_001130087, NM_001130088, NM_032432, uc003gkj.3, uc003gkm.3, uc003gko.2, uc003gkp.2, uc003gkq.2, uc003gkr.2, uc003gks.3_5end |
EntrezGene: | ABLIM2 |
HGNC: | 19195 |
UniProt: | F8W6D8E7EPT1F5GYR0F5GZL6E9PF39Q6H8Q1Q19VH0Q08E71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data