FFCP PHASE1:Hg19::chr4:21558541..21558544,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C358 | |||
|description=CAGE_peak_at_chr4:21558541..21558544,- | |||
|id=chr4:21558541..21558544,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.07e-10;2!UBERON:0006215;1.93e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.92e-57!57;UBERON:0005068!2.92e-57!57;UBERON:0006241!2.92e-57!57;UBERON:0007135!2.92e-57!57;UBERON:0002616!3.34e-51!59;UBERON:0002780!3.96e-50!41;UBERON:0001890!3.96e-50!41;UBERON:0006240!3.96e-50!41;UBERON:0001017!2.09e-49!82;UBERON:0000955!5.06e-49!69;UBERON:0006238!5.06e-49!69;UBERON:0003080!7.87e-49!42;UBERON:0005743!8.13e-47!86;UBERON:0002020!6.39e-46!34;UBERON:0003528!6.39e-46!34;UBERON:0001893!9.25e-46!34;UBERON:0003075!2.68e-44!86;UBERON:0007284!2.68e-44!86;UBERON:0001869!6.39e-44!32;UBERON:0002791!1.38e-42!33;UBERON:0002346!5.04e-42!90;UBERON:0000073!9.09e-42!94;UBERON:0001016!9.09e-42!94;UBERON:0007023!7.52e-39!115;UBERON:0003056!3.46e-35!61;UBERON:0002619!6.38e-35!22;UBERON:0001950!4.76e-33!20;UBERON:0000956!1.63e-30!25;UBERON:0000203!1.63e-30!25;UBERON:0000033!1.00e-28!123;UBERON:0000153!4.54e-27!129;UBERON:0007811!4.54e-27!129;UBERON:0004121!3.02e-20!169;UBERON:0000924!1.30e-19!173;UBERON:0006601!1.30e-19!173;UBERON:0000025!3.64e-18!194;UBERON:0002420!3.57e-17!9;UBERON:0007245!3.57e-17!9;UBERON:0010009!3.57e-17!9;UBERON:0010011!3.57e-17!9;UBERON:0000454!3.57e-17!9;UBERON:0002308!4.61e-17!9;UBERON:0000125!4.61e-17!9;UBERON:0009663!1.60e-15!7;UBERON:0001871!8.36e-14!7;UBERON:0004111!3.77e-13!241;UBERON:0000200!3.34e-12!6;UBERON:0000483!4.96e-12!309;UBERON:0000119!7.77e-12!312;UBERON:0000064!6.17e-11!219;UBERON:0000477!8.59e-11!286;UBERON:0000369!8.76e-11!4;UBERON:0002435!8.76e-11!4;UBERON:0000204!8.76e-11!4;UBERON:0010082!8.76e-11!4;UBERON:0003076!5.00e-10!15;UBERON:0003057!5.00e-10!15;UBERON:0000475!9.48e-10!365;UBERON:0004733!4.53e-09!12;UBERON:0002028!4.53e-09!12;UBERON:0007277!4.53e-09!12;UBERON:0002360!5.12e-09!2;UBERON:0000094!5.12e-09!2;UBERON:0007645!5.12e-09!2;UBERON:0002298!7.94e-09!8;UBERON:0000349!1.07e-08!5;UBERON:0001872!1.12e-08!5;UBERON:0002021!1.42e-08!5;UBERON:0004732!2.39e-08!13;UBERON:0002680!4.01e-08!9;UBERON:0001895!4.01e-08!9;UBERON:0010092!4.01e-08!9;UBERON:0000481!1.16e-07!347;UBERON:0002771!3.85e-07!3;UBERON:0005383!4.47e-07!3;UBERON:0005382!4.47e-07!3;UBERON:0006331!9.02e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.02e-28;22!UBERON:0000956;1.15e-24;25!UBERON:0000203;1.15e-24;25!UBERON:0002791;1.57e-22;32!UBERON:0001869;1.57e-22;32!UBERON:0002780;2.65e-22;41!UBERON:0001890;2.65e-22;41!UBERON:0001950;1.80e-21;20!UBERON:0003528;1.70e-20;34!UBERON:0002020;1.70e-20;34!UBERON:0001893;1.23e-19;34!UBERON:0000073;6.99e-16;53!UBERON:0002616;6.99e-16;53!UBERON:0000349;3.35e-15;5!UBERON:0000200;5.94e-13;6!UBERON:0001871;3.85e-11;6!UBERON:0001905;1.43e-10;2!UBERON:0002757;1.43e-10;2!UBERON:0010134;1.43e-10;2!UBERON:0005408;1.43e-10;2!UBERON:0001899;1.43e-10;2!UBERON:0001873;2.07e-10;2!UBERON:0002702;2.07e-10;2!UBERON:0002771;3.12e-10;2!UBERON:0001876;3.12e-10;2!UBERON:0001954;3.12e-10;2!UBERON:0003022;3.12e-10;2!UBERON:0002421;3.12e-10;2!UBERON:0002600;3.12e-10;2!UBERON:0001017;2.09e-09;75!UBERON:0002420;5.98e-09;9!UBERON:0007245;5.98e-09;9!UBERON:0010009;5.98e-09;9!UBERON:0010011;5.98e-09;9!UBERON:0000454;5.98e-09;9!UBERON:0000955;8.54e-08;68!UBERON:0001870;2.32e-07;3!UBERON:0005383;2.32e-07;3!UBERON:0005382;2.32e-07;3!UBERON:0002114;3.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,7.54e-28,22;UBERON:0002780,6.13e-27,41;UBERON:0001890,6.13e-27,41;UBERON:0003080,6.13e-27,41;UBERON:0006240,6.13e-27,41;UBERON:0000073,1.82e-26,53;UBERON:0002616,1.82e-26,53;UBERON:0002791,2.68e-26,32;UBERON:0001869,2.68e-26,32;UBERON:0001049,4.74e-25,56;UBERON:0005068,4.74e-25,56;UBERON:0006241,4.74e-25,56;UBERON:0007135,4.74e-25,56;UBERON:0003528,8.71e-25,34;UBERON:0002020,8.71e-25,34;UBERON:0001893,8.71e-25,34;UBERON:0000956,1.22e-24,25;UBERON:0000203,1.22e-24,25;UBERON:0001950,1.80e-21,20;UBERON:0000955,2.57e-20,68;UBERON:0006238,2.57e-20,68;UBERON:0003056,3.87e-18,61;UBERON:0001017,4.67e-17,81;UBERON:0003075,4.67e-17,82;UBERON:0007284,4.67e-17,82;UBERON:0002346,3.00e-16,86;UBERON:0001016,2.45e-15,89;UBERON:0000349,3.88e-15,5;UBERON:0010371,2.27e-13,104;UBERON:0000200,6.12e-13,6;UBERON:0001871,3.66e-11,6;UBERON:0001905,1.43e-10,2;UBERON:0002757,1.43e-10,2;UBERON:0010134,1.43e-10,2;UBERON:0005408,1.43e-10,2;UBERON:0001899,1.43e-10,2;UBERON:0001873,1.89e-10,2;UBERON:0010122,1.89e-10,2;UBERON:0010314,1.99e-10,132;UBERON:0002702,2.49e-10,2;UBERON:0002771,2.72e-10,2;UBERON:0001876,3.27e-10,2;UBERON:0001954,3.58e-10,2;UBERON:0003022,3.58e-10,2;UBERON:0002421,3.58e-10,2;UBERON:0002600,3.58e-10,2;UBERON:0007023,1.11e-09,114;UBERON:0002420,5.87e-09,9;UBERON:0007245,5.87e-09,9;UBERON:0010009,5.87e-09,9;UBERON:0010011,5.87e-09,9;UBERON:0000454,5.87e-09,9;UBERON:0004121,8.24e-08,171;UBERON:0000924,8.24e-08,171;UBERON:0006601,8.24e-08,171;UBERON:0005383,2.19e-07,3;UBERON:0005382,2.19e-07,3;UBERON:0001870,2.63e-07,3;UBERON:0011216,2.89e-07,223;UBERON:0002114,2.97e-07,2;UBERON:0000025,5.71e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40669416410513,0,0,0,0.19924798825107,0,0,0.511343412510774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,2.53252521113357,0,3.09621927807429,0.886642856860642,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22583065500418,0,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,2.1282458220105,0,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,2.23487402680012,0.82046545696302,0.252071696221718,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,2.68692835451539,0.317079050969534,0,0,0.496211178389294,0,0,0,5.04425583328236,0,0.227662191351298,0,0,0,0.271878931907327,0.72350050919134,0,0,0,0.628462359664008,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.271965960763659,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:21558541..21558544,- | |||
}} |
Revision as of 00:26, 22 January 2014
Short description: | p@chr4:21558541..21558544, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:21558541..21558544, - |
Coexpression cluster: | C358_cerebellum_middle_occipital_parietal_pineal_medial_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data