FFCP PHASE1:Hg19::chr6:108487245..108487256,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7101 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7973 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y466 | |||
|association_with_transcript=-5bp_to_ENST00000368986_5end | |||
|coexpression_cluster_id=C4542 | |||
|description=CAGE_peak_3_at_NR2E1_5end | |||
|id=chr6:108487245..108487256,+ | |||
|ontology_enrichment_celltype=CL:0002605!2.66e-13!3;CL:0000128!2.53e-09!7;CL:0000126!2.53e-09!7;CL:0000127!2.53e-09!7;CL:0002453!2.53e-09!7;CL:0002319!5.86e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002605;5.77e-41;3!CL:0000128;5.55e-18;7!CL:0000126;5.55e-18;7!CL:0000127;5.55e-18;7!CL:0002319;3.13e-08;25!CL:0000047;6.14e-08;2!CL:0000243;9.70e-08;15!CL:0000125;9.70e-08;15!CL:0000095;5.63e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.37e-41,3;CL:0000128,4.42e-18,7;CL:0000126,4.42e-18,7;CL:0000127,4.42e-18,7;CL:0002453,4.42e-18,7;CL:0002319,2.90e-08,25;CL:0000243,8.86e-08,15;CL:0000125,8.86e-08,15;CL:0000030,8.86e-08,15;CL:0000339,8.86e-08,15;CL:0000095,5.19e-07,17;CL:0000123,5.19e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0010122;6.14e-08;2!CL:0000339;9.70e-08;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!7.35e-92!34;UBERON:0002791!3.03e-88!33;UBERON:0002780!6.75e-86!41;UBERON:0001890!6.75e-86!41;UBERON:0006240!6.75e-86!41;UBERON:0001869!2.36e-85!32;UBERON:0003080!1.03e-83!42;UBERON:0002020!1.13e-79!34;UBERON:0003528!1.13e-79!34;UBERON:0003056!1.37e-67!61;UBERON:0000956!3.53e-67!25;UBERON:0000203!3.53e-67!25;UBERON:0005743!5.43e-64!86;UBERON:0001017!7.03e-64!82;UBERON:0000955!2.03e-61!69;UBERON:0006238!2.03e-61!69;UBERON:0000073!3.53e-60!94;UBERON:0001016!3.53e-60!94;UBERON:0001049!5.56e-60!57;UBERON:0005068!5.56e-60!57;UBERON:0006241!5.56e-60!57;UBERON:0007135!5.56e-60!57;UBERON:0002616!1.03e-57!59;UBERON:0002619!7.61e-56!22;UBERON:0001950!5.64e-55!20;UBERON:0003075!1.36e-48!86;UBERON:0007284!1.36e-48!86;UBERON:0002346!4.52e-46!90;UBERON:0000033!6.83e-40!123;UBERON:0000153!1.24e-37!129;UBERON:0007811!1.24e-37!129;UBERON:0004121!2.26e-33!169;UBERON:0000924!2.17e-32!173;UBERON:0006601!2.17e-32!173;UBERON:0002420!6.66e-26!9;UBERON:0007245!6.66e-26!9;UBERON:0010009!6.66e-26!9;UBERON:0010011!6.66e-26!9;UBERON:0000454!6.66e-26!9;UBERON:0007023!3.92e-24!115;UBERON:0001871!3.28e-23!7;UBERON:0000200!1.94e-22!6;UBERON:0001872!3.13e-19!5;UBERON:0009663!9.61e-19!7;UBERON:0000369!9.64e-16!4;UBERON:0002435!9.64e-16!4;UBERON:0000204!9.64e-16!4;UBERON:0010082!9.64e-16!4;UBERON:0002308!1.93e-14!9;UBERON:0000125!1.93e-14!9;UBERON:0000025!2.16e-14!194;UBERON:0000349!6.92e-13!5;UBERON:0005383!2.13e-12!3;UBERON:0005382!2.13e-12!3;UBERON:0002771!4.39e-12!3;UBERON:0000064!5.95e-12!219;UBERON:0000483!2.19e-10!309;UBERON:0000119!3.35e-10!312;UBERON:0004111!4.66e-10!241;UBERON:0000477!2.01e-09!286;UBERON:0001876!4.45e-09!2;UBERON:0001873!5.63e-09!2;UBERON:0010122!5.63e-09!2;UBERON:0000475!7.85e-09!365;UBERON:0001870!8.98e-09!2;UBERON:0002021!4.39e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.49e-40;25!UBERON:0000203;2.49e-40;25!UBERON:0002791;1.83e-37;32!UBERON:0001869;1.83e-37;32!UBERON:0001893;2.20e-34;34!UBERON:0003528;6.32e-34;34!UBERON:0002020;6.32e-34;34!UBERON:0002780;6.88e-27;41!UBERON:0001890;6.88e-27;41!UBERON:0002619;2.24e-20;22!UBERON:0000073;5.99e-16;53!UBERON:0002616;5.99e-16;53!UBERON:0001950;1.01e-15;20!UBERON:0000955;2.40e-13;68!UBERON:0001872;1.50e-11;5!UBERON:0000349;1.50e-11;5!UBERON:0001017;4.63e-09;75!UBERON:0001871;1.65e-08;6!UBERON:0001876;6.14e-08;2!UBERON:0001873;6.14e-08;2!UBERON:0001954;6.14e-08;2!UBERON:0002702;6.14e-08;2!UBERON:0003022;6.14e-08;2!UBERON:0002421;6.14e-08;2!UBERON:0002600;6.14e-08;2!UBERON:0002420;8.33e-07;9!UBERON:0007245;8.33e-07;9!UBERON:0010009;8.33e-07;9!UBERON:0010011;8.33e-07;9!UBERON:0000454;8.33e-07;9!UBERON:0001016;9.18e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.16e-40,25;UBERON:0000203,4.16e-40,25;UBERON:0002791,9.10e-39,32;UBERON:0001869,9.10e-39,32;UBERON:0003528,1.68e-36,34;UBERON:0002020,1.68e-36,34;UBERON:0001893,1.68e-36,34;UBERON:0002780,2.92e-30,41;UBERON:0001890,2.92e-30,41;UBERON:0003080,2.92e-30,41;UBERON:0006240,2.92e-30,41;UBERON:0003056,1.53e-24,61;UBERON:0000073,2.56e-23,53;UBERON:0002616,2.56e-23,53;UBERON:0001049,4.88e-22,56;UBERON:0005068,4.88e-22,56;UBERON:0006241,4.88e-22,56;UBERON:0007135,4.88e-22,56;UBERON:0000955,1.30e-21,68;UBERON:0006238,1.30e-21,68;UBERON:0001017,1.40e-21,81;UBERON:0002619,3.74e-20,22;UBERON:0001016,2.42e-19,89;UBERON:0003075,4.92e-18,82;UBERON:0007284,4.92e-18,82;UBERON:0002346,3.78e-17,86;UBERON:0001950,1.38e-15,20;UBERON:0010371,5.37e-14,104;UBERON:0001872,1.42e-11,5;UBERON:0000349,2.06e-11,5;UBERON:0004121,2.07e-11,171;UBERON:0000924,2.07e-11,171;UBERON:0006601,2.07e-11,171;UBERON:0010314,8.88e-11,132;UBERON:0001871,2.15e-08,6;UBERON:0011216,2.31e-08,223;UBERON:0001876,6.58e-08,2;UBERON:0001873,7.52e-08,2;UBERON:0010122,7.52e-08,2;UBERON:0002702,8.04e-08,2;UBERON:0001954,8.60e-08,2;UBERON:0003022,8.60e-08,2;UBERON:0002421,8.60e-08,2;UBERON:0002600,8.60e-08,2;UBERON:0002420,9.37e-07,9;UBERON:0007245,9.37e-07,9;UBERON:0010009,9.37e-07,9;UBERON:0010011,9.37e-07,9;UBERON:0000454,9.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72471974262113,1.64249310087461,2.00868223351684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,1.85488647960123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.26602474769461,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,1.93866549219044,0.834912883456661,0,0,0,0,0,0,0,0,0.583209226766509,0,0.885741385813839,1.20596438625408,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0.823040347426423,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,1.0896272488926,0,0,0,0,0,0.91124334987037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,1.1267183763585,0,0,0,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.638535436228605,0,0.252071696221718,0.345786262321089,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87798860003913,0.781078098613847,1.2401207790071,0.507326481551255,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0,0.394636641377094,0,0,0,0.628462359664008,0,0,0,0,0.857718530119876,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,1.01987235286372,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@NR2E1 | |||
}} |
Revision as of 13:16, 22 January 2014
Short description: | p3@NR2E1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NR2E1_5end |
Coexpression cluster: | C4542_Astrocyte_eye_caudate_Neural_amygdala_brain_hippocampus |
Association with transcript: | -5bp_to_ENST00000368986_5end |
EntrezGene: | NR2E1 |
HGNC: | 7973 |
UniProt: | Q9Y466 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.37e-41 | 3 |
oligodendrocyte | 4.42e-18 | 7 |
macroglial cell | 4.42e-18 | 7 |
astrocyte | 4.42e-18 | 7 |
oligodendrocyte precursor cell | 4.42e-18 | 7 |
neural cell | 2.90e-08 | 25 |
glial cell (sensu Vertebrata) | 8.86e-08 | 15 |
glial cell | 8.86e-08 | 15 |
glioblast | 8.86e-08 | 15 |
glioblast (sensu Vertebrata) | 8.86e-08 | 15 |
neuron associated cell | 5.19e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.19e-07 | 17 |