FFCP PHASE1:Hg19::chr6:123101428..123101450,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C919 | |||
|description=CAGE_peak_at_chr6:123101428..123101450,+ | |||
|id=chr6:123101428..123101450,+ | |||
|ontology_enrichment_celltype=CL:0002605!8.48e-12!3;CL:0000047!5.00e-11!8;CL:0000540!1.03e-09!6;CL:0000031!1.03e-09!6;CL:0000404!1.03e-09!6;CL:0002319!4.42e-09!25;CL:0000128!2.01e-08!7;CL:0000126!2.01e-08!7;CL:0000127!2.01e-08!7;CL:0002453!2.01e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.98e-32;3!CL:0002319;1.49e-18;25!CL:0000540;1.28e-16;6!CL:0000404;1.28e-16;6!CL:0000128;3.32e-14;7!CL:0000126;3.32e-14;7!CL:0000127;3.32e-14;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.68e-32,3;CL:0000047,1.99e-21,8;CL:0002319,1.53e-18,25;CL:0000540,1.38e-16,6;CL:0000031,1.38e-16,6;CL:0000404,1.38e-16,6;CL:0000128,3.17e-14,7;CL:0000126,3.17e-14,7;CL:0000127,3.17e-14,7;CL:0002453,3.17e-14,7;CL:0000133,3.62e-10,59;CL:0000221,3.25e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.28e-16;6!CL:0000133;1.19e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;4.81e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.81e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.43e-62!57;UBERON:0005068!2.43e-62!57;UBERON:0006241!2.43e-62!57;UBERON:0007135!2.43e-62!57;UBERON:0001017!3.23e-61!82;UBERON:0005743!5.85e-58!86;UBERON:0000073!1.42e-54!94;UBERON:0001016!1.42e-54!94;UBERON:0001893!2.86e-54!34;UBERON:0001869!1.76e-53!32;UBERON:0002616!9.36e-53!59;UBERON:0002791!1.05e-51!33;UBERON:0002020!4.22e-50!34;UBERON:0003528!4.22e-50!34;UBERON:0002346!1.89e-49!90;UBERON:0002780!7.75e-48!41;UBERON:0001890!7.75e-48!41;UBERON:0006240!7.75e-48!41;UBERON:0003080!1.46e-46!42;UBERON:0000955!2.78e-46!69;UBERON:0006238!2.78e-46!69;UBERON:0003075!3.35e-46!86;UBERON:0007284!3.35e-46!86;UBERON:0000956!3.12e-43!25;UBERON:0000203!3.12e-43!25;UBERON:0003056!2.35e-35!61;UBERON:0002619!4.19e-34!22;UBERON:0000924!1.85e-33!173;UBERON:0006601!1.85e-33!173;UBERON:0001950!6.35e-33!20;UBERON:0004121!7.33e-31!169;UBERON:0000033!2.32e-29!123;UBERON:0000153!2.52e-29!129;UBERON:0007811!2.52e-29!129;UBERON:0007023!5.58e-26!115;UBERON:0001871!1.64e-20!7;UBERON:0003076!3.18e-16!15;UBERON:0003057!3.18e-16!15;UBERON:0000200!7.56e-14!6;UBERON:0000025!2.70e-13!194;UBERON:0002420!4.29e-13!9;UBERON:0007245!4.29e-13!9;UBERON:0010009!4.29e-13!9;UBERON:0010011!4.29e-13!9;UBERON:0000454!4.29e-13!9;UBERON:0004733!1.49e-12!12;UBERON:0002028!1.49e-12!12;UBERON:0007277!1.49e-12!12;UBERON:0000064!1.01e-11!219;UBERON:0004732!1.64e-11!13;UBERON:0000349!2.17e-11!5;UBERON:0002771!4.05e-11!3;UBERON:0004111!7.83e-10!241;UBERON:0002680!3.53e-09!9;UBERON:0001895!3.53e-09!9;UBERON:0010092!3.53e-09!9;UBERON:0002308!5.88e-09!9;UBERON:0000125!5.88e-09!9;UBERON:0000477!6.03e-09!286;UBERON:0000369!3.92e-08!4;UBERON:0002435!3.92e-08!4;UBERON:0000204!3.92e-08!4;UBERON:0010082!3.92e-08!4;UBERON:0001876!4.87e-08!2;UBERON:0009663!8.01e-08!7;UBERON:0000483!1.39e-07!309;UBERON:0000119!1.99e-07!312;UBERON:0003127!2.30e-07!2;UBERON:0000475!2.79e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.73e-31;25!UBERON:0000203;1.73e-31;25!UBERON:0001871;6.07e-24;6!UBERON:0003528;2.95e-22;34!UBERON:0002020;2.95e-22;34!UBERON:0002791;8.80e-22;32!UBERON:0001869;1.04e-21;32!UBERON:0002771;1.26e-21;2!UBERON:0001893;1.47e-20;34!UBERON:0001950;1.36e-17;20!UBERON:0002619;4.93e-16;22!UBERON:0000073;6.74e-13;53!UBERON:0002616;6.74e-13;53!UBERON:0002780;3.36e-12;41!UBERON:0001890;3.36e-12;41!UBERON:0003112;1.39e-11;1!UBERON:0011158;1.39e-11;1!UBERON:0003128;1.39e-11;1!UBERON:0001703;1.39e-11;1!UBERON:0002241;1.39e-11;1!UBERON:0002346;1.68e-11;4!UBERON:0000923;1.68e-11;4!UBERON:0010316;1.68e-11;4!UBERON:0005291;1.68e-11;4!UBERON:0002050;2.22e-09;5!UBERON:0005423;2.22e-09;5!UBERON:0000955;3.68e-09;68!UBERON:0001017;8.23e-09;75!UBERON:0001016;1.00e-08;83!UBERON:0000200;7.85e-08;6!UBERON:0000922;1.34e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.77e-31,25;UBERON:0000203,1.77e-31,25;UBERON:0002791,1.39e-24,32;UBERON:0001869,1.39e-24,32;UBERON:0001871,6.44e-24,6;UBERON:0001016,1.74e-23,89;UBERON:0003528,4.07e-23,34;UBERON:0002020,4.07e-23,34;UBERON:0001893,4.07e-23,34;UBERON:0001017,1.00e-22,81;UBERON:0002771,1.92e-21,2;UBERON:0002780,4.39e-19,41;UBERON:0001890,4.39e-19,41;UBERON:0003080,4.39e-19,41;UBERON:0006240,4.39e-19,41;UBERON:0000073,5.13e-18,53;UBERON:0002616,5.13e-18,53;UBERON:0001950,1.43e-17,20;UBERON:0001049,5.35e-17,56;UBERON:0005068,5.35e-17,56;UBERON:0006241,5.35e-17,56;UBERON:0007135,5.35e-17,56;UBERON:0002619,5.14e-16,22;UBERON:0002346,1.39e-15,86;UBERON:0004121,4.29e-15,171;UBERON:0000924,4.29e-15,171;UBERON:0006601,4.29e-15,171;UBERON:0000955,1.37e-13,68;UBERON:0006238,1.37e-13,68;UBERON:0003056,1.45e-12,61;UBERON:0003112,1.32e-11,1;UBERON:0011158,1.32e-11,1;UBERON:0003128,1.32e-11,1;UBERON:0001703,1.32e-11,1;UBERON:0002241,1.32e-11,1;UBERON:0004761,1.32e-11,1;UBERON:0009617,1.32e-11,1;UBERON:0003075,3.02e-11,82;UBERON:0007284,3.02e-11,82;UBERON:0011216,5.37e-11,223;UBERON:0010371,1.34e-08,104;UBERON:0010314,6.33e-08,132;UBERON:0000200,9.01e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,2.57612388417951,3.83248390204076,5.02170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28685161800217,0,13.1459098172208,1.17261385734044,14.0346525363696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,1.54810963903714,0.591095237907095,0.219385397153973,0,0,0,0,0,0.179515288819544,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,4.89716418608784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953423842781029,0.160753148465019,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,2.19647276823534,0.250381861413,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51625506969434,0,0,0,7.93188891257614,0,0,0,0,0,0,0.321146125482298,0,0,0.205116364240755,4.53729053199093,0.0691572524642179,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,6.56369770821863,0,0,1.23109871051734,0,0,0,0,0,0,0,0,0.339848664884159,0.263091094251396,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,5.67255897442491,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:123101428..123101450,+ | |||
}} |
Revision as of 13:39, 22 January 2014
Short description: | p@chr6:123101428..123101450, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:123101428..123101450, + |
Coexpression cluster: | C919_Neurons_Neural_parietal_Astrocyte_duodenum_occipital_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.68e-32 | 3 |
neuronal stem cell | 1.99e-21 | 8 |
neural cell | 1.53e-18 | 25 |
neuron | 1.38e-16 | 6 |
neuroblast | 1.38e-16 | 6 |
electrically signaling cell | 1.38e-16 | 6 |
oligodendrocyte | 3.17e-14 | 7 |
macroglial cell | 3.17e-14 | 7 |
astrocyte | 3.17e-14 | 7 |
oligodendrocyte precursor cell | 3.17e-14 | 7 |
neurectodermal cell | 3.62e-10 | 59 |
ectodermal cell | 3.25e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.81e-10 | 10 |