FFCP PHASE1:Hg19::chr6:152957909..152957926,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NF91 | |||
|association_with_transcript=13bp_to_uc010kjb.1_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_20_at_SYNE1_5end | |||
|id=chr6:152957909..152957926,- | |||
|ontology_enrichment_celltype=CL:0000625!4.55e-09!11;CL:0000623!9.72e-07!3;CL:0000825!9.72e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.07e-39;3!UBERON:0006222;1.10e-13;1!UBERON:0010122;1.75e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-52!115;UBERON:0001049!1.21e-41!57;UBERON:0005068!1.21e-41!57;UBERON:0006241!1.21e-41!57;UBERON:0007135!1.21e-41!57;UBERON:0002616!1.55e-37!59;UBERON:0001017!6.70e-36!82;UBERON:0000955!3.06e-35!69;UBERON:0006238!3.06e-35!69;UBERON:0005743!1.40e-33!86;UBERON:0002780!8.33e-32!41;UBERON:0001890!8.33e-32!41;UBERON:0006240!8.33e-32!41;UBERON:0003080!7.79e-31!42;UBERON:0000073!1.51e-30!94;UBERON:0001016!1.51e-30!94;UBERON:0003075!1.38e-27!86;UBERON:0007284!1.38e-27!86;UBERON:0002020!2.07e-26!34;UBERON:0003528!2.07e-26!34;UBERON:0001893!3.08e-26!34;UBERON:0001869!6.77e-26!32;UBERON:0002346!8.90e-26!90;UBERON:0002791!8.76e-25!33;UBERON:0002619!3.68e-24!22;UBERON:0001950!2.35e-21!20;UBERON:0000956!1.09e-20!25;UBERON:0000203!1.09e-20!25;UBERON:0003056!8.92e-20!61;UBERON:0000153!6.14e-19!129;UBERON:0007811!6.14e-19!129;UBERON:0000033!3.08e-18!123;UBERON:0004121!4.89e-14!169;UBERON:0000924!2.14e-13!173;UBERON:0006601!2.14e-13!173;UBERON:0004733!1.97e-12!12;UBERON:0002028!1.97e-12!12;UBERON:0007277!1.97e-12!12;UBERON:0003076!1.12e-11!15;UBERON:0003057!1.12e-11!15;UBERON:0004732!2.69e-11!13;UBERON:0000200!5.07e-11!6;UBERON:0001871!4.18e-10!7;UBERON:0000349!3.42e-09!5;UBERON:0000025!4.95e-09!194;UBERON:0002298!1.55e-08!8;UBERON:0002680!6.38e-08!9;UBERON:0001895!6.38e-08!9;UBERON:0010092!6.38e-08!9;UBERON:0002308!3.60e-07!9;UBERON:0000125!3.60e-07!9;UBERON:0002420!5.81e-07!9;UBERON:0007245!5.81e-07!9;UBERON:0010009!5.81e-07!9;UBERON:0010011!5.81e-07!9;UBERON:0000454!5.81e-07!9;UBERON:0001894!6.00e-07!7;UBERON:0006222!6.00e-07!7;UBERON:0000988!8.68e-07!3;UBERON:0004111!9.23e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;3.29e-37;12!UBERON:0002028;3.29e-37;12!UBERON:0002680;7.28e-35;9!UBERON:0001895;7.28e-35;9!UBERON:0004732;2.45e-34;13!UBERON:0002037;8.28e-20;6!UBERON:0002298;4.36e-19;6!UBERON:0000988;2.11e-17;3!UBERON:0001870;2.11e-17;3!UBERON:0000073;1.22e-14;53!UBERON:0002616;1.22e-14;53!UBERON:0000955;5.25e-10;68!UBERON:0007023;2.03e-09;114!UBERON:0001016;4.58e-09;83!UBERON:0001017;1.66e-08;75!UBERON:0001894;4.19e-08;7!UBERON:0001897;1.09e-07;2!UBERON:0010225;1.09e-07;2!UBERON:0003127;1.75e-07;2!UBERON:0001873;1.75e-07;2!UBERON:0002148;1.75e-07;2!UBERON:0002702;1.75e-07;2!UBERON:0006331;1.75e-07;2!UBERON:0009662;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,1.81e-37,12;UBERON:0002028,1.81e-37,12;UBERON:0007277,1.81e-37,12;UBERON:0002680,4.96e-35,9;UBERON:0001895,4.96e-35,9;UBERON:0010092,4.96e-35,9;UBERON:0004732,1.42e-34,13;UBERON:0003076,6.04e-30,15;UBERON:0003057,6.04e-30,15;UBERON:0000073,1.05e-26,53;UBERON:0002616,1.05e-26,53;UBERON:0001049,3.11e-25,56;UBERON:0005068,3.11e-25,56;UBERON:0006241,3.11e-25,56;UBERON:0007135,3.11e-25,56;UBERON:0007023,7.39e-23,114;UBERON:0000955,2.60e-20,68;UBERON:0006238,2.60e-20,68;UBERON:0002037,8.04e-20,6;UBERON:0006215,8.04e-20,6;UBERON:0002298,2.49e-19,6;UBERON:0000988,1.39e-17,3;UBERON:0001870,1.79e-17,3;UBERON:0001017,6.32e-17,81;UBERON:0003075,6.32e-17,82;UBERON:0007284,6.32e-17,82;UBERON:0002346,4.37e-16,86;UBERON:0001016,3.87e-15,89;UBERON:0010371,4.27e-13,104;UBERON:0010314,4.82e-10,132;UBERON:0001894,4.12e-08,7;UBERON:0006222,4.12e-08,7;UBERON:0000025,8.40e-08,192;UBERON:0001897,1.12e-07,2;UBERON:0010225,1.12e-07,2;UBERON:0011216,1.22e-07,223;UBERON:0002702,1.45e-07,2;UBERON:0001873,1.54e-07,2;UBERON:0010122,1.54e-07,2;UBERON:0002148,1.75e-07,2;UBERON:0006331,1.75e-07,2;UBERON:0009662,1.75e-07,2;UBERON:0003127,2.25e-07,2;UBERON:0002780,2.32e-07,41;UBERON:0001890,2.32e-07,41;UBERON:0003080,2.32e-07,41;UBERON:0006240,2.32e-07,41;UBERON:0004121,2.47e-07,171;UBERON:0000924,2.47e-07,171;UBERON:0006601,2.47e-07,171 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0.651083453856419,0.950452044448374,0.301150238155546,0.127986611154418,0,0,0.821127996921047,0.604820229674197,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.788123040807709,1.07813787429759,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.320182673410333,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0.311039587661807,0,0,0,0,2.3948309234694,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.482385754501632,4.5774520895125,11.2790845129849,3.54657142744257,0.658156191461918,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,1.40558667435203,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0.0882561266915003,0,0,0,1.2029051231617,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0.160753148465019,0,0.415440338029185,0,0,0.971992906528395,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,0.52893040697076,0,0,1.06787412567695,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0,0,1.77213635993397,0.610131324509816,0.3755727921195,0.573409195690071,1.88579387612649,0.620964029413834,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.899209151350433,0,0.478901577171454,0.615349092722265,0.252071696221718,0.345786262321089,0.484426936895553,0,0,0,0,0,0.381382095467167,0,0,0.676892955143315,0,0,0,0,0,0.675375846183947,0,0.826747186004736,0.697573912132975,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0.682986574053893,0,0,0,1.90315252335129,0.920818829879887,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0,0.679708458751268,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.815897882290976,0.872701380680755,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,3.31667775783512,0.517164979309476,0.852935927603924,0.476128862927481,0,0,0,0,0,0,0,0,1.07583308089015,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p20@SYNE1 | |||
}} |
Revision as of 14:41, 22 January 2014
Short description: | p20@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SYNE1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 13bp_to_uc010kjb.1_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | Q8NF91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data