FFCP PHASE1:Mm9::chr2:123915697..123915754,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=214968|HGNC=|MCL_coexpression_id=13|UniProt=Q76KF0,A2AW75|association_with_transcript=0bp_to_ENSMUST00000103241,ENSMUST00000137172,uc008mbk.1_5end|description=CAGE_peak_2_at_Sema6d_5end|id=chr2:123915697..123915754,+|ontology_enrichment_celltype=CL:0000117!2.24e-14!23;CL:0000337!2.24e-14!23;CL:0000540!4.23e-12!33;CL:0000047!4.23e-12!33;CL:0000031!4.23e-12!33;CL:0000404!4.23e-12!33;CL:0002319!7.02e-11!43;CL:0000221!3.10e-10!44;CL:0000133!3.10e-10!44;CL:0000393!6.21e-08!39;CL:0000211!6.21e-08!39;CL:0000055!6.26e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.21e-17,23;CL:0000337,1.21e-17,23;CL:0000540,2.91e-11,33;CL:0000047,2.91e-11,33;CL:0000031,2.91e-11,33;CL:0000404,2.91e-11,33;CL:0002319,2.05e-08,43;CL:0000393,3.48e-08,39;CL:0000211,3.48e-08,39;CL:0000221,5.07e-08,44;CL:0000133,5.07e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.99e-22!75;UBERON:0001016!4.99e-22!75;UBERON:0001017!6.69e-22!73;UBERON:0005743!6.69e-22!73;UBERON:0002346!6.71e-21!71;UBERON:0003075!6.71e-21!71;UBERON:0007284!6.71e-21!71;UBERON:0001049!4.80e-19!52;UBERON:0005068!4.80e-19!52;UBERON:0006241!4.80e-19!52;UBERON:0007135!4.80e-19!52;UBERON:0002020!6.61e-19!34;UBERON:0004121!3.20e-18!102;UBERON:0000924!3.20e-18!102;UBERON:0006601!3.20e-18!102;UBERON:0000955!2.50e-17!50;UBERON:0006238!2.50e-17!50;UBERON:0002616!7.54e-17!49;UBERON:0002791!4.17e-15!29;UBERON:0003528!4.17e-15!29;UBERON:0001893!4.17e-15!29;UBERON:0000033!4.92e-15!63;UBERON:0003056!2.67e-14!49;UBERON:0003080!8.01e-14!40;UBERON:0002780!2.89e-13!39;UBERON:0001890!2.89e-13!39;UBERON:0006240!2.89e-13!39;UBERON:0000025!6.40e-12!114;UBERON:0000956!5.28e-10!21;UBERON:0001869!5.28e-10!21;UBERON:0000203!5.28e-10!21;UBERON:0004111!1.05e-09!122;UBERON:0002619!2.15e-09!17;UBERON:0000468!7.22e-08!333;UBERON:0002021!9.14e-07!10;UBERON:0000411!9.14e-07!10;UBERON:0001950!9.14e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.58e-23,54;UBERON:0002020,6.75e-23,34;UBERON:0001017,2.15e-21,73;UBERON:0001049,3.60e-21,52;UBERON:0005068,3.60e-21,52;UBERON:0006241,3.60e-21,52;UBERON:0007135,3.60e-21,52;UBERON:0001016,2.72e-20,75;UBERON:0002346,5.12e-19,64;UBERON:0003075,5.12e-19,64;UBERON:0007284,5.12e-19,64;UBERON:0003528,6.30e-18,29;UBERON:0002791,6.30e-18,29;UBERON:0001893,6.30e-18,29;UBERON:0000955,1.82e-16,47;UBERON:0006238,1.82e-16,47;UBERON:0002616,7.08e-16,46;UBERON:0003080,9.08e-15,40;UBERON:0010371,1.49e-14,73;UBERON:0004121,1.75e-14,95;UBERON:0000924,1.75e-14,95;UBERON:0006601,1.75e-14,95;UBERON:0002780,4.55e-14,39;UBERON:0001890,4.55e-14,39;UBERON:0006240,4.55e-14,39;UBERON:0003056,7.47e-13,49;UBERON:0010314,1.07e-12,92;UBERON:0000956,2.75e-11,21;UBERON:0001869,2.75e-11,21;UBERON:0000203,2.75e-11,21;UBERON:0002619,3.25e-11,17;UBERON:0000025,5.02e-10,114;UBERON:0002021,1.72e-08,10;UBERON:0000411,1.72e-08,10;UBERON:0001950,1.72e-08,10;UBERON:0004111,3.27e-08,122;UBERON:0002420,3.81e-08,8;UBERON:0007245,3.81e-08,8;UBERON:0010009,3.81e-08,8;UBERON:0010011,3.81e-08,8;UBERON:0000454,3.81e-08,8;UBERON:0003076,3.17e-07,12;UBERON:0003057,3.17e-07,12;UBERON:0002240,3.63e-07,6;UBERON:0005174,3.63e-07,6;UBERON:0001137,3.63e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,1.1665793944457,0.419959264876088,1.43752564364972,0,0,0,0,0,0,7.08107613008592,5.81890077199236,5.07065122804943,0,0,0,0,0,0,1.53687322128622,1.76272340924412,1.21505344498522,0.630974884054146,11.7116903605559,10.3808214247258,6.73699395682247,6.61333750025831,8.27296907949019,8.8092704799511,11.7472351038373,9.83081812839958,8.83638127792299,10.9785172322892,9.89735404057844,4.74611098302348,11.2552522006336,11.4598685832608,17.6777151284201,21.2133804390663,17.8943467992289,0.908714319998209,0.604572480854284,0.289864488701678,5.16254326188832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,3.12273588179045,4.26251669636998,2.53677046981664,3.46662073271032,2.4693628498498,0.251333182659351,0,0,0,0.161766849947409,0,0,0,2.92780797011547,2.93225389538837,0,0,0,0,6.44099749440738,4.11750542536764,11.5602003943835,5.73620256634512,7.92717917724025,7.06479351502504,8.76102820565891,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,0.919608417733892,1.44049703844279,2.10986744970001,1.56483948048054,1.0249097622788,0.937017245597288,0.776110112217047,0,0.378212160335639,0,0,0,0,0.205782136407943,0,0,0,0,1.03562886267751,0.703578179943289,1.08037236876609,0.23674473558521,0.787056926989615,0.154267112887378,0,0.268273401399619,0.350296027101508,0,0.32833492815819,0.0810688095458557,0,0,0.268412837520744,5.46753866266731,8.23236899034275,0,0,0.426576501070468,0.928946687441754,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0.189667900953082,1.82797620175566,0,0.407302655690628,0.387904974335251,0.561086559122548,2.33975187359752,0,0.31399745568275,0.123397163921801,0,0.667380422864376,0,0,0,0.482354319504834,0.25462585178142,0.287696137450811,1.13494658742525,0.549122826376163,1.43768206527355,0.744281895337007,1.24815069245824,2.02063102357689,0.896987067609561,0.482443521363367,1.10851914099963,0.568474235311454,0.488894929326078,0.339490171550376,1.64283173801951,1.84256883185997,1.6663054862021,2.53673742215138,5.67486518782288,8.41565820665345,9.56728611944923,3.60499292374624,3.10832967358612,2.89298117163023,0,0,0,0,6.42202359951168,7.97039468826982,0,0,1.26203287766503,0,1.93881057959519,0.955875191810208,0.445597348164788,0.566153061577665,0.809621403349789,0.584511715822624,0.790575555893047,4.17717711348349,0,0.178065603667255,1.14020871547503,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0,0.177340233642274,1.24858172321449,0.822745103010605,0.304464949114599,0.23467170806371,0,0.441056796109924,0,0,0,0.119372344003136,0,0.291480836629851,7.41701208042039,0.170870880797853,0.82554747185289,0,0.376736914009382,0.136694227721025,0.228778173206523,0,0,0,0,0.632671987162271,1.01659733563424,1.51207477150522,0.627264888043406,0.218362563746178,0.404593039154462,1.57041565878138,0,0.388844919875379,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.844780627453891,0.234714477291508,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,9.60078132449013,6.90487854760765,5.15605962095457,5.15559547031063,3.42541259885321,6.7985450765073,6.75022500231806,6.30449684513909,5.89085131679466,6.21312374102184,0.93408612825759,1.19707462020309,2.73173769206615,2.18796045361465,1.88651846365184,1.47074806760011,4.22268782823069,2.88449080134452,2.56735367673452,2.27427490587418,3.54871019846336,2.26351609663291,3.27745276144588,3.13723246783859,4.25022470271538,1.90517476513229,4.63537303779422,3.08654752741928,4.12085900803307,3.97437084362873,3.42869252385415,3.37204031702741,2.38436189947321,1.88950341622027,3.3879376949519,2.876896668317,3.65855945745545,2.10455769150274,4.6173398707593,1.68342681497322,2.37270036248348,4.62971067165148,2.45538625901814,4.02835787083512,1.73615949883027,1.49886346762768,2.8071793013449,2.36358159453128,2.10417165275728,1.10295709559758,0.695603506861264|short_description=p2@Sema6d}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:214968 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q76KF0,uniprot:A2AW75 | |||
|association_with_transcript=0bp_to_ENSMUST00000103241,ENSMUST00000137172,uc008mbk.1_5end | |||
|cluster_id=chr2:123915697..123915754,+ | |||
|description=CAGE_peak_2_at_Sema6d_5end | |||
|id=chr2:123915697..123915754,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.24e-14!23;CL:0000337!2.24e-14!23;CL:0000540!4.23e-12!33;CL:0000047!4.23e-12!33;CL:0000031!4.23e-12!33;CL:0000404!4.23e-12!33;CL:0002319!7.02e-11!43;CL:0000221!3.10e-10!44;CL:0000133!3.10e-10!44;CL:0000393!6.21e-08!39;CL:0000211!6.21e-08!39;CL:0000055!6.26e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.21e-17,23;CL:0000337,1.21e-17,23;CL:0000540,2.91e-11,33;CL:0000047,2.91e-11,33;CL:0000031,2.91e-11,33;CL:0000404,2.91e-11,33;CL:0002319,2.05e-08,43;CL:0000393,3.48e-08,39;CL:0000211,3.48e-08,39;CL:0000221,5.07e-08,44;CL:0000133,5.07e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.99e-22!75;UBERON:0001016!4.99e-22!75;UBERON:0001017!6.69e-22!73;UBERON:0005743!6.69e-22!73;UBERON:0002346!6.71e-21!71;UBERON:0003075!6.71e-21!71;UBERON:0007284!6.71e-21!71;UBERON:0001049!4.80e-19!52;UBERON:0005068!4.80e-19!52;UBERON:0006241!4.80e-19!52;UBERON:0007135!4.80e-19!52;UBERON:0002020!6.61e-19!34;UBERON:0004121!3.20e-18!102;UBERON:0000924!3.20e-18!102;UBERON:0006601!3.20e-18!102;UBERON:0000955!2.50e-17!50;UBERON:0006238!2.50e-17!50;UBERON:0002616!7.54e-17!49;UBERON:0002791!4.17e-15!29;UBERON:0003528!4.17e-15!29;UBERON:0001893!4.17e-15!29;UBERON:0000033!4.92e-15!63;UBERON:0003056!2.67e-14!49;UBERON:0003080!8.01e-14!40;UBERON:0002780!2.89e-13!39;UBERON:0001890!2.89e-13!39;UBERON:0006240!2.89e-13!39;UBERON:0000025!6.40e-12!114;UBERON:0000956!5.28e-10!21;UBERON:0001869!5.28e-10!21;UBERON:0000203!5.28e-10!21;UBERON:0004111!1.05e-09!122;UBERON:0002619!2.15e-09!17;UBERON:0000468!7.22e-08!333;UBERON:0002021!9.14e-07!10;UBERON:0000411!9.14e-07!10;UBERON:0001950!9.14e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.58e-23,54;UBERON:0002020,6.75e-23,34;UBERON:0001017,2.15e-21,73;UBERON:0001049,3.60e-21,52;UBERON:0005068,3.60e-21,52;UBERON:0006241,3.60e-21,52;UBERON:0007135,3.60e-21,52;UBERON:0001016,2.72e-20,75;UBERON:0002346,5.12e-19,64;UBERON:0003075,5.12e-19,64;UBERON:0007284,5.12e-19,64;UBERON:0003528,6.30e-18,29;UBERON:0002791,6.30e-18,29;UBERON:0001893,6.30e-18,29;UBERON:0000955,1.82e-16,47;UBERON:0006238,1.82e-16,47;UBERON:0002616,7.08e-16,46;UBERON:0003080,9.08e-15,40;UBERON:0010371,1.49e-14,73;UBERON:0004121,1.75e-14,95;UBERON:0000924,1.75e-14,95;UBERON:0006601,1.75e-14,95;UBERON:0002780,4.55e-14,39;UBERON:0001890,4.55e-14,39;UBERON:0006240,4.55e-14,39;UBERON:0003056,7.47e-13,49;UBERON:0010314,1.07e-12,92;UBERON:0000956,2.75e-11,21;UBERON:0001869,2.75e-11,21;UBERON:0000203,2.75e-11,21;UBERON:0002619,3.25e-11,17;UBERON:0000025,5.02e-10,114;UBERON:0002021,1.72e-08,10;UBERON:0000411,1.72e-08,10;UBERON:0001950,1.72e-08,10;UBERON:0004111,3.27e-08,122;UBERON:0002420,3.81e-08,8;UBERON:0007245,3.81e-08,8;UBERON:0010009,3.81e-08,8;UBERON:0010011,3.81e-08,8;UBERON:0000454,3.81e-08,8;UBERON:0003076,3.17e-07,12;UBERON:0003057,3.17e-07,12;UBERON:0002240,3.63e-07,6;UBERON:0005174,3.63e-07,6;UBERON:0001137,3.63e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,1.1665793944457,0.419959264876088,1.43752564364972,0,0,0,0,0,0,7.08107613008592,5.81890077199236,5.07065122804943,0,0,0,0,0,0,1.53687322128622,1.76272340924412,1.21505344498522,0.630974884054146,11.7116903605559,10.3808214247258,6.73699395682247,6.61333750025831,8.27296907949019,8.8092704799511,11.7472351038373,9.83081812839958,8.83638127792299,10.9785172322892,9.89735404057844,4.74611098302348,11.2552522006336,11.4598685832608,17.6777151284201,21.2133804390663,17.8943467992289,0.908714319998209,0.604572480854284,0.289864488701678,5.16254326188832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,3.12273588179045,4.26251669636998,2.53677046981664,3.46662073271032,2.4693628498498,0.251333182659351,0,0,0,0.161766849947409,0,0,0,2.92780797011547,2.93225389538837,0,0,0,0,6.44099749440738,4.11750542536764,11.5602003943835,5.73620256634512,7.92717917724025,7.06479351502504,8.76102820565891,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,0.919608417733892,1.44049703844279,2.10986744970001,1.56483948048054,1.0249097622788,0.937017245597288,0.776110112217047,0,0.378212160335639,0,0,0,0,0.205782136407943,0,0,0,0,1.03562886267751,0.703578179943289,1.08037236876609,0.23674473558521,0.787056926989615,0.154267112887378,0,0.268273401399619,0.350296027101508,0,0.32833492815819,0.0810688095458557,0,0,0.268412837520744,5.46753866266731,8.23236899034275,0,0,0.426576501070468,0.928946687441754,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0.189667900953082,1.82797620175566,0,0.407302655690628,0.387904974335251,0.561086559122548,2.33975187359752,0,0.31399745568275,0.123397163921801,0,0.667380422864376,0,0,0,0.482354319504834,0.25462585178142,0.287696137450811,1.13494658742525,0.549122826376163,1.43768206527355,0.744281895337007,1.24815069245824,2.02063102357689,0.896987067609561,0.482443521363367,1.10851914099963,0.568474235311454,0.488894929326078,0.339490171550376,1.64283173801951,1.84256883185997,1.6663054862021,2.53673742215138,5.67486518782288,8.41565820665345,9.56728611944923,3.60499292374624,3.10832967358612,2.89298117163023,0,0,0,0,6.42202359951168,7.97039468826982,0,0,1.26203287766503,0,1.93881057959519,0.955875191810208,0.445597348164788,0.566153061577665,0.809621403349789,0.584511715822624,0.790575555893047,4.17717711348349,0,0.178065603667255,1.14020871547503,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0,0.177340233642274,1.24858172321449,0.822745103010605,0.304464949114599,0.23467170806371,0,0.441056796109924,0,0,0,0.119372344003136,0,0.291480836629851,7.41701208042039,0.170870880797853,0.82554747185289,0,0.376736914009382,0.136694227721025,0.228778173206523,0,0,0,0,0.632671987162271,1.01659733563424,1.51207477150522,0.627264888043406,0.218362563746178,0.404593039154462,1.57041565878138,0,0.388844919875379,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.844780627453891,0.234714477291508,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,9.60078132449013,6.90487854760765,5.15605962095457,5.15559547031063,3.42541259885321,6.7985450765073,6.75022500231806,6.30449684513909,5.89085131679466,6.21312374102184,0.93408612825759,1.19707462020309,2.73173769206615,2.18796045361465,1.88651846365184,1.47074806760011,4.22268782823069,2.88449080134452,2.56735367673452,2.27427490587418,3.54871019846336,2.26351609663291,3.27745276144588,3.13723246783859,4.25022470271538,1.90517476513229,4.63537303779422,3.08654752741928,4.12085900803307,3.97437084362873,3.42869252385415,3.37204031702741,2.38436189947321,1.88950341622027,3.3879376949519,2.876896668317,3.65855945745545,2.10455769150274,4.6173398707593,1.68342681497322,2.37270036248348,4.62971067165148,2.45538625901814,4.02835787083512,1.73615949883027,1.49886346762768,2.8071793013449,2.36358159453128,2.10417165275728,1.10295709559758,0.695603506861264 | |||
|short_description=p2@Sema6d | |||
}} |
Revision as of 22:35, 3 August 2015
Short description: | p2@Sema6d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sema6d_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000103241, ENSMUST00000137172, uc008mbk.1_5end |
EntrezGene: | 214968 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.21e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.21e-17 | 23 |
neuron | 2.91e-11 | 33 |
neuronal stem cell | 2.91e-11 | 33 |
neuroblast | 2.91e-11 | 33 |
electrically signaling cell | 2.91e-11 | 33 |
neural cell | 2.05e-08 | 43 |
electrically responsive cell | 3.48e-08 | 39 |
electrically active cell | 3.48e-08 | 39 |
ectodermal cell | 5.07e-08 | 44 |
neurectodermal cell | 5.07e-08 | 44 |