FFCP PHASE1:Mm9::chr10:126628600..126628612,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=856|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:126628600..126628612,-|id=chr10:126628600..126628612,-|ontology_enrichment_celltype=CL:0000055!4.30e-14!50;CL:0000393!1.65e-13!39;CL:0000211!1.65e-13!39;CL:0000117!2.13e-13!23;CL:0000337!2.13e-13!23;CL:0002319!3.47e-13!43;CL:0000540!4.13e-13!33;CL:0000047!4.13e-13!33;CL:0000031!4.13e-13!33;CL:0000404!4.13e-13!33;CL:0000221!1.27e-12!44;CL:0000133!1.27e-12!44|ontology_enrichment_celltype_v019_2=CL:0000117,9.46e-29,23;CL:0000337,9.46e-29,23;CL:0000540,6.72e-20,33;CL:0000047,6.72e-20,33;CL:0000031,6.72e-20,33;CL:0000404,6.72e-20,33;CL:0002319,6.31e-19,43;CL:0000221,2.48e-18,44;CL:0000133,2.48e-18,44;CL:0000393,2.59e-17,39;CL:0000211,2.59e-17,39;CL:0002321,8.63e-10,70;CL:0000723,2.81e-07,91;CL:0000048,2.81e-07,91;CL:0002609,9.83e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.17e-25!73;UBERON:0005743!4.17e-25!73;UBERON:0000073!3.25e-23!75;UBERON:0001016!3.25e-23!75;UBERON:0001049!9.04e-20!52;UBERON:0005068!9.04e-20!52;UBERON:0006241!9.04e-20!52;UBERON:0007135!9.04e-20!52;UBERON:0000955!2.28e-19!50;UBERON:0006238!2.28e-19!50;UBERON:0004121!7.89e-19!102;UBERON:0000924!7.89e-19!102;UBERON:0006601!7.89e-19!102;UBERON:0002616!8.92e-19!49;UBERON:0002346!9.88e-19!71;UBERON:0003075!9.88e-19!71;UBERON:0007284!9.88e-19!71;UBERON:0002020!2.93e-17!34;UBERON:0000033!7.30e-17!63;UBERON:0003080!7.97e-16!40;UBERON:0003056!1.26e-15!49;UBERON:0002780!1.71e-15!39;UBERON:0001890!1.71e-15!39;UBERON:0006240!1.71e-15!39;UBERON:0002791!2.22e-14!29;UBERON:0003528!2.22e-14!29;UBERON:0001893!2.22e-14!29;UBERON:0000153!5.34e-11!94;UBERON:0000956!1.03e-10!21;UBERON:0001869!1.03e-10!21;UBERON:0000203!1.03e-10!21;UBERON:0007811!1.64e-10!86;UBERON:0002619!5.57e-10!17;UBERON:0002021!1.86e-07!10;UBERON:0000411!1.86e-07!10;UBERON:0001950!1.86e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.98e-33,34;UBERON:0000073,4.59e-31,54;UBERON:0001017,1.24e-28,73;UBERON:0001016,1.41e-27,75;UBERON:0003528,1.85e-26,29;UBERON:0002791,1.85e-26,29;UBERON:0001893,1.85e-26,29;UBERON:0001049,4.56e-26,52;UBERON:0005068,4.56e-26,52;UBERON:0006241,4.56e-26,52;UBERON:0007135,4.56e-26,52;UBERON:0002346,1.13e-23,64;UBERON:0003075,1.13e-23,64;UBERON:0007284,1.13e-23,64;UBERON:0004121,7.66e-22,95;UBERON:0000924,7.66e-22,95;UBERON:0006601,7.66e-22,95;UBERON:0000955,7.77e-22,47;UBERON:0006238,7.77e-22,47;UBERON:0002780,1.42e-21,39;UBERON:0001890,1.42e-21,39;UBERON:0006240,1.42e-21,39;UBERON:0003080,7.50e-21,40;UBERON:0002616,1.19e-20,46;UBERON:0000956,1.28e-19,21;UBERON:0001869,1.28e-19,21;UBERON:0000203,1.28e-19,21;UBERON:0010371,1.46e-19,73;UBERON:0002619,2.20e-19,17;UBERON:0003056,1.87e-18,49;UBERON:0002021,2.54e-16,10;UBERON:0000411,2.54e-16,10;UBERON:0001950,2.54e-16,10;UBERON:0010314,1.56e-15,92;UBERON:0000025,1.53e-08,114;UBERON:0001948,3.49e-08,5;UBERON:0002315,3.49e-08,5;UBERON:0002420,6.87e-08,8;UBERON:0007245,6.87e-08,8;UBERON:0010009,6.87e-08,8;UBERON:0010011,6.87e-08,8;UBERON:0000454,6.87e-08,8;UBERON:0004111,2.00e-07,122;UBERON:0002240,9.83e-07,6;UBERON:0005174,9.83e-07,6;UBERON:0001137,9.83e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0.171217968225505,0.239316476986009,0,0.524522414513984,0,0,0,0,0.137114433605739,0,1.36069264241712,0.297872853602656,0.783599367416806,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.506884656097573,0.367093504323363,0.782391344348039,1.96222640742402,0.659058548203415,1.94429899074283,0.979904951377538,0,0.167782606057736,0,0.336093799142464,1.02903774414379,0.573066879877513,0.515672092277442,2.42779753031517,2.11596391708813,0.633831403506179,0.677689064138264,0,0.449949858640699,0.988866362566974,0.7104801149461,0.898800331555214,4.99483796918021,1.34796496001021,3.91517221161903,0.420649922702764,1.71390590642282,2.65042249141936,1.22490799214954,1.72521847832825,2.75765635983006,4.40463523997555,2.42605942361857,2.61131106535614,1.58263545276233,4.66586982372289,3.12548022334056,3.62937898701795,3.37657566019008,2.59757021220577,2.65165726926301,1.85083185038834,1.3047961207771,0,0,0,0.860423876981386,0.679971333707751,0,0,0,0,1.36344258062446,1.81850203222008,1.41335829804136,0.14084341977668,0,0,0,0.432982082022428,0,0,0.22836775943812,0,0.445326417194474,0.173485326766136,1.21786191324856,0.230615497256059,0.150722640552623,0.705532242814229,0.376999773989026,0.247194967734374,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.292780797011547,2.09446706813455,0,0.718890747035522,0,0.127070227073065,0.898743836428936,0.457500602818626,0.628271760564322,0.521472960576829,0.511430914660661,2.70124457927428,0.648965052271031,0.509196819251581,0.497627882440372,0.505445516867349,0.420883711772948,0.520481771850815,0.229902104433473,0.900310649026746,1.20563854268572,0.340182495756639,0.38434116085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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=856 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:126628600..126628612,- | |||
|description=CAGE_peak_at_chr10:126628600..126628612,- | |||
|id=chr10:126628600..126628612,- | |||
|ontology_enrichment_celltype=CL:0000055!4.30e-14!50;CL:0000393!1.65e-13!39;CL:0000211!1.65e-13!39;CL:0000117!2.13e-13!23;CL:0000337!2.13e-13!23;CL:0002319!3.47e-13!43;CL:0000540!4.13e-13!33;CL:0000047!4.13e-13!33;CL:0000031!4.13e-13!33;CL:0000404!4.13e-13!33;CL:0000221!1.27e-12!44;CL:0000133!1.27e-12!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.46e-29,23;CL:0000337,9.46e-29,23;CL:0000540,6.72e-20,33;CL:0000047,6.72e-20,33;CL:0000031,6.72e-20,33;CL:0000404,6.72e-20,33;CL:0002319,6.31e-19,43;CL:0000221,2.48e-18,44;CL:0000133,2.48e-18,44;CL:0000393,2.59e-17,39;CL:0000211,2.59e-17,39;CL:0002321,8.63e-10,70;CL:0000723,2.81e-07,91;CL:0000048,2.81e-07,91;CL:0002609,9.83e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.17e-25!73;UBERON:0005743!4.17e-25!73;UBERON:0000073!3.25e-23!75;UBERON:0001016!3.25e-23!75;UBERON:0001049!9.04e-20!52;UBERON:0005068!9.04e-20!52;UBERON:0006241!9.04e-20!52;UBERON:0007135!9.04e-20!52;UBERON:0000955!2.28e-19!50;UBERON:0006238!2.28e-19!50;UBERON:0004121!7.89e-19!102;UBERON:0000924!7.89e-19!102;UBERON:0006601!7.89e-19!102;UBERON:0002616!8.92e-19!49;UBERON:0002346!9.88e-19!71;UBERON:0003075!9.88e-19!71;UBERON:0007284!9.88e-19!71;UBERON:0002020!2.93e-17!34;UBERON:0000033!7.30e-17!63;UBERON:0003080!7.97e-16!40;UBERON:0003056!1.26e-15!49;UBERON:0002780!1.71e-15!39;UBERON:0001890!1.71e-15!39;UBERON:0006240!1.71e-15!39;UBERON:0002791!2.22e-14!29;UBERON:0003528!2.22e-14!29;UBERON:0001893!2.22e-14!29;UBERON:0000153!5.34e-11!94;UBERON:0000956!1.03e-10!21;UBERON:0001869!1.03e-10!21;UBERON:0000203!1.03e-10!21;UBERON:0007811!1.64e-10!86;UBERON:0002619!5.57e-10!17;UBERON:0002021!1.86e-07!10;UBERON:0000411!1.86e-07!10;UBERON:0001950!1.86e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.98e-33,34;UBERON:0000073,4.59e-31,54;UBERON:0001017,1.24e-28,73;UBERON:0001016,1.41e-27,75;UBERON:0003528,1.85e-26,29;UBERON:0002791,1.85e-26,29;UBERON:0001893,1.85e-26,29;UBERON:0001049,4.56e-26,52;UBERON:0005068,4.56e-26,52;UBERON:0006241,4.56e-26,52;UBERON:0007135,4.56e-26,52;UBERON:0002346,1.13e-23,64;UBERON:0003075,1.13e-23,64;UBERON:0007284,1.13e-23,64;UBERON:0004121,7.66e-22,95;UBERON:0000924,7.66e-22,95;UBERON:0006601,7.66e-22,95;UBERON:0000955,7.77e-22,47;UBERON:0006238,7.77e-22,47;UBERON:0002780,1.42e-21,39;UBERON:0001890,1.42e-21,39;UBERON:0006240,1.42e-21,39;UBERON:0003080,7.50e-21,40;UBERON:0002616,1.19e-20,46;UBERON:0000956,1.28e-19,21;UBERON:0001869,1.28e-19,21;UBERON:0000203,1.28e-19,21;UBERON:0010371,1.46e-19,73;UBERON:0002619,2.20e-19,17;UBERON:0003056,1.87e-18,49;UBERON:0002021,2.54e-16,10;UBERON:0000411,2.54e-16,10;UBERON:0001950,2.54e-16,10;UBERON:0010314,1.56e-15,92;UBERON:0000025,1.53e-08,114;UBERON:0001948,3.49e-08,5;UBERON:0002315,3.49e-08,5;UBERON:0002420,6.87e-08,8;UBERON:0007245,6.87e-08,8;UBERON:0010009,6.87e-08,8;UBERON:0010011,6.87e-08,8;UBERON:0000454,6.87e-08,8;UBERON:0004111,2.00e-07,122;UBERON:0002240,9.83e-07,6;UBERON:0005174,9.83e-07,6;UBERON:0001137,9.83e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0.171217968225505,0.239316476986009,0,0.524522414513984,0,0,0,0,0.137114433605739,0,1.36069264241712,0.297872853602656,0.783599367416806,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.506884656097573,0.367093504323363,0.782391344348039,1.96222640742402,0.659058548203415,1.94429899074283,0.979904951377538,0,0.167782606057736,0,0.336093799142464,1.02903774414379,0.573066879877513,0.515672092277442,2.42779753031517,2.11596391708813,0.633831403506179,0.677689064138264,0,0.449949858640699,0.988866362566974,0.7104801149461,0.898800331555214,4.99483796918021,1.34796496001021,3.91517221161903,0.420649922702764,1.71390590642282,2.65042249141936,1.22490799214954,1.72521847832825,2.75765635983006,4.40463523997555,2.42605942361857,2.61131106535614,1.58263545276233,4.66586982372289,3.12548022334056,3.62937898701795,3.37657566019008,2.59757021220577,2.65165726926301,1.85083185038834,1.3047961207771,0,0,0,0.860423876981386,0.679971333707751,0,0,0,0,1.36344258062446,1.81850203222008,1.41335829804136,0.14084341977668,0,0,0,0.432982082022428,0,0,0.22836775943812,0,0.445326417194474,0.173485326766136,1.21786191324856,0.230615497256059,0.150722640552623,0.705532242814229,0.376999773989026,0.247194967734374,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.292780797011547,2.09446706813455,0,0.718890747035522,0,0.127070227073065,0.898743836428936,0.457500602818626,0.628271760564322,0.521472960576829,0.511430914660661,2.70124457927428,0.648965052271031,0.509196819251581,0.497627882440372,0.505445516867349,0.420883711772948,0.520481771850815,0.229902104433473,0.900310649026746,1.20563854268572,0.340182495756639,0.384341160854549,0.281105173679186,1.03481348295606,0.646703978798527,1.89106080167819,0,0.657587197282725,0.834141747676794,0.696504333044333,0.61734640922383,1.19420560091096,0,0.772043721344145,0,0.621377317606506,0,0.540186184383045,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.233530684734339,0,0.820837320395476,0.0810688095458557,0.292399974850665,0,0.402619256281115,1.05144974282064,0.617427674275707,0,0,0.639864751605702,0.928946687441754,0.644337306610467,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0.379335801906163,0.342745537829186,2.25415471346161,0.610953983535943,0.969762435838129,0.140271639780637,0.379419222745544,0.295220295959204,0.31399745568275,0.246794327843601,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.169745085775188,0,0.837531287209079,0.476087281772027,0.390267295715598,0,0.221464689648775,0.318909537314974,0.81931657357869,0.172684981865896,0.433947175744535,0,1.08781136763742,0,0.275936746304732,0.963303539926752,0.234423373184406,0,0,0,1.17131623288992,0.861693590931196,0.716906393857656,0.891194696329576,0.849229592366497,0.809621403349789,0.876767573733936,0.395287777946524,1.92792789853084,0.567760340833074,1.24645922567079,0.488660878060728,0.329940245945071,1.32745138339963,0.242780636154981,0,0,0,0.614870295887855,0,0.363533729477506,0,0,0,0,0.680879211507576,0,0.905510786479282,0.428674070063185,1.06404140185364,0.891844088010353,0.987294123612726,0.608929898229199,0.704015124191131,0.21183207086382,0,0.8244312647074,0.322928853391811,0,0.119372344003136,0.164140899745061,0,0.556275906031529,0.170870880797853,0.206386867963223,0.370389054739423,0.376736914009382,0.546776910884101,0.228778173206523,0.679913719975421,0.979660166265606,0.414599921413271,0,0.949007980743406,0.406638934253697,0.216010681643603,0,0.655087691238533,0,0.247960367176008,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0,0.388902376688095,0.129159823477731,0.337912250981556,0.938857909166032,0.2604087696879,0.104859344425711,0.483168241652012,0.576060012515731,0,0,0.616265742988964,0.649604114888975,0.179026695667481,0.198681354781265,0.360586348559907,0.295379054349154,0.504832249740738,0.381034033274999,0.302478555410522,0.38983152295901,0.192423683280659,0.701261413089414,0.226730383615211,0.887943813496259,0.269141569828427,0.167884616364078,0.579568782096571,0.563047426353546,0.36630324853453,0.214368379079066,0,1.6942555278512,4.14292712856459,2.86447756719698,2.749650917499,1.37016503954128,2.2661816921691,4.72515750162264,2.70192721934532,1.35942722695261,4.14208249401456,0.207574695168353,0.399024873401031,0.682934423016537,0.972426868273176,0.419226325255965,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,1.2673964994512,0.565879024158229,0.655490552289177,0.960377286073039,0.34461281373368,0,0.579421629724277,0.77163688185482,0.412085900803307,1.03039244094078,0,0.532427418478012,1.1921809497366,0.581385666529314,0.564656282491984,0.507687647350059,0.548783918618318,0.789209134313529,0.2716082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| |||
|short_description=p@chr10:126628600..126628612,- | |||
}} |
Latest revision as of 00:55, 4 August 2015
Short description: | p@chr10:126628600..126628612, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126628600..126628612, - |
Coexpression cluster: | MCL_coexpression_mm9:856 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.46e-29 | 23 |
neuroblast (sensu Vertebrata) | 9.46e-29 | 23 |
neuron | 6.72e-20 | 33 |
neuronal stem cell | 6.72e-20 | 33 |
neuroblast | 6.72e-20 | 33 |
electrically signaling cell | 6.72e-20 | 33 |
neural cell | 6.31e-19 | 43 |
ectodermal cell | 2.48e-18 | 44 |
neurectodermal cell | 2.48e-18 | 44 |
electrically responsive cell | 2.59e-17 | 39 |
electrically active cell | 2.59e-17 | 39 |
embryonic cell | 8.63e-10 | 70 |
somatic stem cell | 2.81e-07 | 91 |
multi fate stem cell | 2.81e-07 | 91 |
neuron of cerebral cortex | 9.83e-07 | 6 |