FFCP PHASE1:Mm9::chr19:47253528..47253569,+: Difference between revisions
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{{FFCP|EntrezGene=18011|HGNC=|MCL_coexpression_id=39|UniProt=Q923S6,Q499W5|association_with_transcript=218bp_to_ENSMUST00000111808,NM_021360,uc008hut.1,uc008huu.1_5end|description=CAGE_peak_3_at_Neurl1a_5end|id=chr19:47253528..47253569,+|ontology_enrichment_celltype=CL:0000540!3.27e-12!33;CL:0000047!3.27e-12!33;CL:0000031!3.27e-12!33;CL:0000404!3.27e-12!33;CL:0000393!3.79e-10!39;CL:0000211!3.79e-10!39;CL:0000221!9.22e-09!44;CL:0000133!9.22e-09!44;CL:0002319!2.10e-08!43;CL:0000117!1.64e-07!23;CL:0000337!1.64e-07!23;CL:0000055!8.81e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.02e-15,33;CL:0000047,1.02e-15,33;CL:0000031,1.02e-15,33;CL:0000404,1.02e-15,33;CL:0000393,5.33e-12,39;CL:0000211,5.33e-12,39;CL:0000221,1.13e-10,44;CL:0000133,1.13e-10,44;CL:0002319,3.91e-10,43;CL:0000107,1.35e-08,9;CL:0000117,1.66e-08,23;CL:0000337,1.66e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.50e-27!73;UBERON:0005743!4.50e-27!73;UBERON:0004121!1.47e-26!102;UBERON:0000924!1.47e-26!102;UBERON:0006601!1.47e-26!102;UBERON:0000073!3.34e-26!75;UBERON:0001016!3.34e-26!75;UBERON:0002346!2.70e-24!71;UBERON:0003075!2.70e-24!71;UBERON:0007284!2.70e-24!71;UBERON:0001049!2.92e-19!52;UBERON:0005068!2.92e-19!52;UBERON:0006241!2.92e-19!52;UBERON:0007135!2.92e-19!52;UBERON:0000033!4.86e-19!63;UBERON:0000955!7.22e-18!50;UBERON:0006238!7.22e-18!50;UBERON:0002616!2.64e-17!49;UBERON:0003056!5.97e-16!49;UBERON:0003080!4.55e-15!40;UBERON:0002780!1.72e-14!39;UBERON:0001890!1.72e-14!39;UBERON:0006240!1.72e-14!39;UBERON:0002020!1.21e-12!34;UBERON:0002791!6.47e-10!29;UBERON:0003528!6.47e-10!29;UBERON:0001893!6.47e-10!29;UBERON:0002021!6.53e-08!10;UBERON:0000411!6.53e-08!10;UBERON:0001950!6.53e-08!10;UBERON:0007811!6.26e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.26e-39,73;UBERON:0001016,1.57e-37,75;UBERON:0004121,2.99e-34,95;UBERON:0000924,2.99e-34,95;UBERON:0006601,2.99e-34,95;UBERON:0002346,1.47e-33,64;UBERON:0003075,1.47e-33,64;UBERON:0007284,1.47e-33,64;UBERON:0000073,9.32e-31,54;UBERON:0010371,7.01e-30,73;UBERON:0001049,4.48e-29,52;UBERON:0005068,4.48e-29,52;UBERON:0006241,4.48e-29,52;UBERON:0007135,4.48e-29,52;UBERON:0010314,4.02e-25,92;UBERON:0000955,2.17e-24,47;UBERON:0006238,2.17e-24,47;UBERON:0002616,1.67e-23,46;UBERON:0003056,9.21e-23,49;UBERON:0003080,3.97e-21,40;UBERON:0002780,3.25e-20,39;UBERON:0001890,3.25e-20,39;UBERON:0006240,3.25e-20,39;UBERON:0002020,1.78e-17,34;UBERON:0003528,3.51e-13,29;UBERON:0002791,3.51e-13,29;UBERON:0001893,3.51e-13,29;UBERON:0002021,6.55e-12,10;UBERON:0000411,6.55e-12,10;UBERON:0001950,6.55e-12,10;UBERON:0002410,1.35e-08,9;UBERON:0003076,2.37e-08,12;UBERON:0003057,2.37e-08,12;UBERON:0001894,2.98e-08,10;UBERON:0006222,2.98e-08,10;UBERON:0002619,3.31e-08,17;UBERON:0002420,5.40e-08,8;UBERON:0007245,5.40e-08,8;UBERON:0010009,5.40e-08,8;UBERON:0010011,5.40e-08,8;UBERON:0000454,5.40e-08,8;UBERON:0011216,1.48e-07,194;UBERON:0000956,2.77e-07,21;UBERON:0001869,2.77e-07,21;UBERON:0000203,2.77e-07,21;UBERON:0004111,7.49e-07,122|phase1_expression=1.28119077683835,0,0,0,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0.319984845586813,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0,1.82084814773638,0.528990979272033,3.1691570175309,0,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0.405017814995072,0,8.56952953211411,4.63823935998388,0.244981598429908,0.287536413054709,0.919218786610021,2.20231761998777,4.21368215681119,4.76180253094355,4.48413378282659,3.01909223887952,1.56274011167028,6.70039197603314,6.19038871034848,9.62628960993904,5.89257170947335,4.41352210477219,6.15118171223492,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.83096445709685,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,0.867426633830679,1.52232739156071,0.691846491768175,1.20578112442098,2.82212897125692,1.0053327306374,0,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,33.3770108593164,33.0925796765259,0.255457055208591,0,0,0,5.69204429738326,5.94750783664214,1.88481528169297,11.6462294528825,9.46147192122223,5.61027720310812,5.19172041816825,0.712875546952214,0.373220911830279,0.758168275301024,4.20883711772948,0,0,0.720248519221397,1.05493372485001,1.02054748726992,1.2811372028485,1.78033276663485,9.8307280880826,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0,0,0,0.268273401399619,0,0,0,0,0,0,0,9.2527577368216,1.13195073617213,0,0,1.06644125267617,1.39342003116263,0.644337306610467,0.403367049246685,0.444756087689741,0.380451252225118,0,0.823494773620054,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0,0.189667900953082,0.34274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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18011 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q923S6,uniprot:Q499W5 | |||
|association_with_transcript=218bp_to_ENSMUST00000111808,NM_021360,uc008hut.1,uc008huu.1_5end | |||
|cluster_id=chr19:47253528..47253569,+ | |||
|description=CAGE_peak_3_at_Neurl1a_5end | |||
|id=chr19:47253528..47253569,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.27e-12!33;CL:0000047!3.27e-12!33;CL:0000031!3.27e-12!33;CL:0000404!3.27e-12!33;CL:0000393!3.79e-10!39;CL:0000211!3.79e-10!39;CL:0000221!9.22e-09!44;CL:0000133!9.22e-09!44;CL:0002319!2.10e-08!43;CL:0000117!1.64e-07!23;CL:0000337!1.64e-07!23;CL:0000055!8.81e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.02e-15,33;CL:0000047,1.02e-15,33;CL:0000031,1.02e-15,33;CL:0000404,1.02e-15,33;CL:0000393,5.33e-12,39;CL:0000211,5.33e-12,39;CL:0000221,1.13e-10,44;CL:0000133,1.13e-10,44;CL:0002319,3.91e-10,43;CL:0000107,1.35e-08,9;CL:0000117,1.66e-08,23;CL:0000337,1.66e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.50e-27!73;UBERON:0005743!4.50e-27!73;UBERON:0004121!1.47e-26!102;UBERON:0000924!1.47e-26!102;UBERON:0006601!1.47e-26!102;UBERON:0000073!3.34e-26!75;UBERON:0001016!3.34e-26!75;UBERON:0002346!2.70e-24!71;UBERON:0003075!2.70e-24!71;UBERON:0007284!2.70e-24!71;UBERON:0001049!2.92e-19!52;UBERON:0005068!2.92e-19!52;UBERON:0006241!2.92e-19!52;UBERON:0007135!2.92e-19!52;UBERON:0000033!4.86e-19!63;UBERON:0000955!7.22e-18!50;UBERON:0006238!7.22e-18!50;UBERON:0002616!2.64e-17!49;UBERON:0003056!5.97e-16!49;UBERON:0003080!4.55e-15!40;UBERON:0002780!1.72e-14!39;UBERON:0001890!1.72e-14!39;UBERON:0006240!1.72e-14!39;UBERON:0002020!1.21e-12!34;UBERON:0002791!6.47e-10!29;UBERON:0003528!6.47e-10!29;UBERON:0001893!6.47e-10!29;UBERON:0002021!6.53e-08!10;UBERON:0000411!6.53e-08!10;UBERON:0001950!6.53e-08!10;UBERON:0007811!6.26e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.26e-39,73;UBERON:0001016,1.57e-37,75;UBERON:0004121,2.99e-34,95;UBERON:0000924,2.99e-34,95;UBERON:0006601,2.99e-34,95;UBERON:0002346,1.47e-33,64;UBERON:0003075,1.47e-33,64;UBERON:0007284,1.47e-33,64;UBERON:0000073,9.32e-31,54;UBERON:0010371,7.01e-30,73;UBERON:0001049,4.48e-29,52;UBERON:0005068,4.48e-29,52;UBERON:0006241,4.48e-29,52;UBERON:0007135,4.48e-29,52;UBERON:0010314,4.02e-25,92;UBERON:0000955,2.17e-24,47;UBERON:0006238,2.17e-24,47;UBERON:0002616,1.67e-23,46;UBERON:0003056,9.21e-23,49;UBERON:0003080,3.97e-21,40;UBERON:0002780,3.25e-20,39;UBERON:0001890,3.25e-20,39;UBERON:0006240,3.25e-20,39;UBERON:0002020,1.78e-17,34;UBERON:0003528,3.51e-13,29;UBERON:0002791,3.51e-13,29;UBERON:0001893,3.51e-13,29;UBERON:0002021,6.55e-12,10;UBERON:0000411,6.55e-12,10;UBERON:0001950,6.55e-12,10;UBERON:0002410,1.35e-08,9;UBERON:0003076,2.37e-08,12;UBERON:0003057,2.37e-08,12;UBERON:0001894,2.98e-08,10;UBERON:0006222,2.98e-08,10;UBERON:0002619,3.31e-08,17;UBERON:0002420,5.40e-08,8;UBERON:0007245,5.40e-08,8;UBERON:0010009,5.40e-08,8;UBERON:0010011,5.40e-08,8;UBERON:0000454,5.40e-08,8;UBERON:0011216,1.48e-07,194;UBERON:0000956,2.77e-07,21;UBERON:0001869,2.77e-07,21;UBERON:0000203,2.77e-07,21;UBERON:0004111,7.49e-07,122 | |||
|phase1_expression=1.28119077683835,0,0,0,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0.319984845586813,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0,1.82084814773638,0.528990979272033,3.1691570175309,0,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0.405017814995072,0,8.56952953211411,4.63823935998388,0.244981598429908,0.287536413054709,0.919218786610021,2.20231761998777,4.21368215681119,4.76180253094355,4.48413378282659,3.01909223887952,1.56274011167028,6.70039197603314,6.19038871034848,9.62628960993904,5.89257170947335,4.41352210477219,6.15118171223492,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.83096445709685,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,0.867426633830679,1.52232739156071,0.691846491768175,1.20578112442098,2.82212897125692,1.0053327306374,0,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,33.3770108593164,33.0925796765259,0.255457055208591,0,0,0,5.69204429738326,5.94750783664214,1.88481528169297,11.6462294528825,9.46147192122223,5.61027720310812,5.19172041816825,0.712875546952214,0.373220911830279,0.758168275301024,4.20883711772948,0,0,0.720248519221397,1.05493372485001,1.02054748726992,1.2811372028485,1.78033276663485,9.8307280880826,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0,0,0,0.268273401399619,0,0,0,0,0,0,0,9.2527577368216,1.13195073617213,0,0,1.06644125267617,1.39342003116263,0.644337306610467,0.403367049246685,0.444756087689741,0.380451252225118,0,0.823494773620054,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0.193952487167626,0.210407459670956,0.189709611372772,0,0.156998727841375,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0.704070744865506,0.167506257441816,0.952174563544055,0.780534591431195,0.157635144106191,0.44292937929755,0.637819074629948,0,0.345369963731791,0.578596234326046,0,0,0.491764273019036,0,5.45872005958493,3.39913891117389,0.327869890753351,0.504941854408746,2.2085575359138,3.12350995437311,7.53981892064796,2.62865677747807,2.22798674082394,3.96307143104365,4.85772842009873,7.59865230569411,6.32460444714438,5.14114106274891,0.283880170416537,0.534196811001766,0.81443479676788,1.31976098378028,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,14.6389030474129,0.18006109403131,1.4229455216103,2.35770738534752,5.67488747655275,8.38333442729732,5.26556865926787,14.9187825066154,0.469343416127421,0.21183207086382,0.441056796109924,0,0.484393280087717,0.120625849856312,0.119372344003136,0,0,4.07935664423121,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,0,0.474503990371703,1.62655573701479,1.18805874903981,0.418176592028937,1.31017538247707,1.07891477107857,0.578574190077352,0.523511883968059,0.259229946583586,0.621339313086926,1.12738587736838,0.299033092087958,0.165458490457098,0.777804753376191,0.645799117388655,0.337912250981556,0.352071715937262,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,4.44336066274038,0,0,0.214368379079066,0,9.60078132449013,4.60325236507177,6.30185064783336,7.73339320546594,13.7016503954128,10.5755145634558,11.4753825039407,8.10578165803597,7.25027854374727,12.4262474820437,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,1.83843508450014,0.666740183404846,1.03017528619447,1.60459604795908,0.252697211763798,1.2673964994512,0.754505365544305,1.12369808963859,0.320125762024346,0.976402972245426,0,1.27472758539341,0.38581844092741,0.824171801606613,0.883193520806384,1.02860775715625,1.59728225543404,0.476872379894642,1.16277133305863,0.752875043322645,1.35383372626682,0.73171189149109,1.05227884575137,0.950628796921032,1.12228454331548,0.711810108745045,0.29551344712669,1.22769312950907,0.309873682371932,0.771626443924566,1.24905288968973,0.467863216890817,0,0.57386499620653,0,0.927471342481686 | |||
|short_description=p3@Neurl1a | |||
}} |
Revision as of 06:28, 4 August 2015
Short description: | p3@Neurl1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Neurl1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 218bp_to_ENSMUST00000111808, NM_021360, uc008hut.1, uc008huu.1_5end |
EntrezGene: | 18011 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.02e-15 | 33 |
neuronal stem cell | 1.02e-15 | 33 |
neuroblast | 1.02e-15 | 33 |
electrically signaling cell | 1.02e-15 | 33 |
electrically responsive cell | 5.33e-12 | 39 |
electrically active cell | 5.33e-12 | 39 |
ectodermal cell | 1.13e-10 | 44 |
neurectodermal cell | 1.13e-10 | 44 |
neural cell | 3.91e-10 | 43 |
autonomic neuron | 1.35e-08 | 9 |
CNS neuron (sensu Vertebrata) | 1.66e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.66e-08 | 23 |