FFCP PHASE1:Mm9::chr12:120477090..120477107,-: Difference between revisions
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{{FFCP|EntrezGene=320910|HGNC=|MCL_coexpression_id=283|UniProt=|association_with_transcript=135bp_to_ENSMUST00000137804_5end|description=CAGE_peak_11_at_Itgb8_5end|id=chr12:120477090..120477107,-|ontology_enrichment_celltype=CL:0000221!9.94e-11!44;CL:0000133!9.94e-11!44;CL:0002319!3.92e-10!43;CL:0000055!1.56e-08!50;CL:0000117!2.72e-07!23;CL:0000337!2.72e-07!23|ontology_enrichment_celltype_v019_2=CL:0000221,3.47e-12,44;CL:0000133,3.47e-12,44;CL:0002319,4.85e-11,43;CL:0000333,6.61e-09,10;CL:0000095,6.61e-09,10;CL:0000243,6.61e-09,10;CL:0000123,6.61e-09,10;CL:0000125,6.61e-09,10;CL:0000030,6.61e-09,10;CL:0000339,6.61e-09,10;CL:0002453,3.19e-08,8;CL:0002610,1.06e-07,3;CL:0002614,1.99e-07,3;CL:0000117,3.36e-07,23;CL:0000337,3.36e-07,23;CL:0002321,8.76e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.73e-24!75;UBERON:0001016!3.73e-24!75;UBERON:0004121!3.33e-23!102;UBERON:0000924!3.33e-23!102;UBERON:0006601!3.33e-23!102;UBERON:0001017!7.76e-23!73;UBERON:0005743!7.76e-23!73;UBERON:0000033!2.26e-20!63;UBERON:0001049!2.08e-18!52;UBERON:0005068!2.08e-18!52;UBERON:0006241!2.08e-18!52;UBERON:0007135!2.08e-18!52;UBERON:0000955!5.61e-18!50;UBERON:0006238!5.61e-18!50;UBERON:0002616!3.33e-17!49;UBERON:0002346!2.86e-16!71;UBERON:0003075!2.86e-16!71;UBERON:0007284!2.86e-16!71;UBERON:0002020!9.97e-15!34;UBERON:0003056!4.34e-14!49;UBERON:0003080!2.10e-12!40;UBERON:0002791!4.49e-12!29;UBERON:0003528!4.49e-12!29;UBERON:0001893!4.49e-12!29;UBERON:0002780!8.04e-12!39;UBERON:0001890!8.04e-12!39;UBERON:0006240!8.04e-12!39;UBERON:0007811!1.44e-09!86;UBERON:0000956!6.56e-09!21;UBERON:0001869!6.56e-09!21;UBERON:0000203!6.56e-09!21;UBERON:0002619!1.51e-08!17;UBERON:0000153!2.14e-08!94;UBERON:0002021!1.96e-07!10;UBERON:0000411!1.96e-07!10;UBERON:0001950!1.96e-07!10;UBERON:0003076!4.88e-07!12;UBERON:0003057!4.88e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.57e-32,75;UBERON:0001017,6.96e-31,73;UBERON:0000073,8.86e-26,54;UBERON:0004121,4.85e-25,95;UBERON:0000924,4.85e-25,95;UBERON:0006601,4.85e-25,95;UBERON:0001049,1.67e-22,52;UBERON:0005068,1.67e-22,52;UBERON:0006241,1.67e-22,52;UBERON:0007135,1.67e-22,52;UBERON:0000955,6.92e-20,47;UBERON:0006238,6.92e-20,47;UBERON:0002616,2.31e-18,46;UBERON:0002346,5.43e-17,64;UBERON:0003075,5.43e-17,64;UBERON:0007284,5.43e-17,64;UBERON:0010371,1.85e-15,73;UBERON:0002020,3.17e-15,34;UBERON:0003528,1.03e-12,29;UBERON:0002791,1.03e-12,29;UBERON:0001893,1.03e-12,29;UBERON:0003080,2.19e-12,40;UBERON:0003076,2.53e-12,12;UBERON:0003057,2.53e-12,12;UBERON:0002021,7.13e-12,10;UBERON:0000411,7.13e-12,10;UBERON:0001950,7.13e-12,10;UBERON:0002780,2.72e-11,39;UBERON:0001890,2.72e-11,39;UBERON:0006240,2.72e-11,39;UBERON:0010314,7.82e-11,92;UBERON:0002619,4.49e-10,17;UBERON:0000956,2.05e-09,21;UBERON:0001869,2.05e-09,21;UBERON:0000203,2.05e-09,21;UBERON:0003056,2.66e-09,49;UBERON:0002950,5.35e-09,4;UBERON:0001891,5.35e-09,4;UBERON:0009616,5.35e-09,4;UBERON:0010286,5.35e-09,4;UBERON:0004733,9.11e-09,6;UBERON:0004732,9.11e-09,6;UBERON:0002028,9.11e-09,6;UBERON:0007277,9.11e-09,6;UBERON:0011216,2.50e-08,194;UBERON:0004684,1.06e-07,3;UBERON:0002275,1.06e-07,3;UBERON:0002038,1.99e-07,3;UBERON:0009663,1.99e-07,3;UBERON:0009661,1.99e-07,3;UBERON:0000125,1.99e-07,3;UBERON:0002308,1.99e-07,3;UBERON:0000025,2.29e-07,114;UBERON:0004111,3.23e-07,122|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.319984845586813,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.30815093828268,0.878744730937887,1.55543919259427,1.25987779462826,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,0.606949382578793,1.05798195854407,0,0,0,0,0,0,2.09720077362883,1.92109152660777,0.103689612308478,0.270011876663381,0.210324961351382,1.14260393761521,0.883474163806454,0.244981598429908,0.287536413054709,0,4.40463523997555,2.68143409978894,3.37934373163736,0.659431438650969,0.548925861614458,0,3.07101298901519,4.50210088025344,1.68078072554491,1.76777151284201,1.28134512719193,0.559198337475902,0.757261933331841,3.02286240427142,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0,0.125666591329675,0.741584903203122,0,0,0,0,0,0,4.39171195517321,1.25668024088073,0,0,0,0,1.49790639404823,2.74500361691176,0.879580464790051,1.39059456153821,2.55715457330331,1.66230435647648,1.62241263067758,0.611036183101898,0.124406970610093,0,0,0.910843100738926,0.459804208866946,0.720248519221397,0.30140963567143,0.544291993210623,0.384341160854549,0.374806898238915,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0,0,0.233530684734339,0.329119699826961,0,0,0,0,0.134206418760372,2.10289948564127,0.720332286654991,0,0,0,0,0.12886746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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320910 | |||
|HGNC= | |||
|MCL_coexpression_id=283 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=135bp_to_ENSMUST00000137804_5end | |||
|cluster_id=chr12:120477090..120477107,- | |||
|description=CAGE_peak_11_at_Itgb8_5end | |||
|id=chr12:120477090..120477107,- | |||
|ontology_enrichment_celltype=CL:0000221!9.94e-11!44;CL:0000133!9.94e-11!44;CL:0002319!3.92e-10!43;CL:0000055!1.56e-08!50;CL:0000117!2.72e-07!23;CL:0000337!2.72e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.47e-12,44;CL:0000133,3.47e-12,44;CL:0002319,4.85e-11,43;CL:0000333,6.61e-09,10;CL:0000095,6.61e-09,10;CL:0000243,6.61e-09,10;CL:0000123,6.61e-09,10;CL:0000125,6.61e-09,10;CL:0000030,6.61e-09,10;CL:0000339,6.61e-09,10;CL:0002453,3.19e-08,8;CL:0002610,1.06e-07,3;CL:0002614,1.99e-07,3;CL:0000117,3.36e-07,23;CL:0000337,3.36e-07,23;CL:0002321,8.76e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.73e-24!75;UBERON:0001016!3.73e-24!75;UBERON:0004121!3.33e-23!102;UBERON:0000924!3.33e-23!102;UBERON:0006601!3.33e-23!102;UBERON:0001017!7.76e-23!73;UBERON:0005743!7.76e-23!73;UBERON:0000033!2.26e-20!63;UBERON:0001049!2.08e-18!52;UBERON:0005068!2.08e-18!52;UBERON:0006241!2.08e-18!52;UBERON:0007135!2.08e-18!52;UBERON:0000955!5.61e-18!50;UBERON:0006238!5.61e-18!50;UBERON:0002616!3.33e-17!49;UBERON:0002346!2.86e-16!71;UBERON:0003075!2.86e-16!71;UBERON:0007284!2.86e-16!71;UBERON:0002020!9.97e-15!34;UBERON:0003056!4.34e-14!49;UBERON:0003080!2.10e-12!40;UBERON:0002791!4.49e-12!29;UBERON:0003528!4.49e-12!29;UBERON:0001893!4.49e-12!29;UBERON:0002780!8.04e-12!39;UBERON:0001890!8.04e-12!39;UBERON:0006240!8.04e-12!39;UBERON:0007811!1.44e-09!86;UBERON:0000956!6.56e-09!21;UBERON:0001869!6.56e-09!21;UBERON:0000203!6.56e-09!21;UBERON:0002619!1.51e-08!17;UBERON:0000153!2.14e-08!94;UBERON:0002021!1.96e-07!10;UBERON:0000411!1.96e-07!10;UBERON:0001950!1.96e-07!10;UBERON:0003076!4.88e-07!12;UBERON:0003057!4.88e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.57e-32,75;UBERON:0001017,6.96e-31,73;UBERON:0000073,8.86e-26,54;UBERON:0004121,4.85e-25,95;UBERON:0000924,4.85e-25,95;UBERON:0006601,4.85e-25,95;UBERON:0001049,1.67e-22,52;UBERON:0005068,1.67e-22,52;UBERON:0006241,1.67e-22,52;UBERON:0007135,1.67e-22,52;UBERON:0000955,6.92e-20,47;UBERON:0006238,6.92e-20,47;UBERON:0002616,2.31e-18,46;UBERON:0002346,5.43e-17,64;UBERON:0003075,5.43e-17,64;UBERON:0007284,5.43e-17,64;UBERON:0010371,1.85e-15,73;UBERON:0002020,3.17e-15,34;UBERON:0003528,1.03e-12,29;UBERON:0002791,1.03e-12,29;UBERON:0001893,1.03e-12,29;UBERON:0003080,2.19e-12,40;UBERON:0003076,2.53e-12,12;UBERON:0003057,2.53e-12,12;UBERON:0002021,7.13e-12,10;UBERON:0000411,7.13e-12,10;UBERON:0001950,7.13e-12,10;UBERON:0002780,2.72e-11,39;UBERON:0001890,2.72e-11,39;UBERON:0006240,2.72e-11,39;UBERON:0010314,7.82e-11,92;UBERON:0002619,4.49e-10,17;UBERON:0000956,2.05e-09,21;UBERON:0001869,2.05e-09,21;UBERON:0000203,2.05e-09,21;UBERON:0003056,2.66e-09,49;UBERON:0002950,5.35e-09,4;UBERON:0001891,5.35e-09,4;UBERON:0009616,5.35e-09,4;UBERON:0010286,5.35e-09,4;UBERON:0004733,9.11e-09,6;UBERON:0004732,9.11e-09,6;UBERON:0002028,9.11e-09,6;UBERON:0007277,9.11e-09,6;UBERON:0011216,2.50e-08,194;UBERON:0004684,1.06e-07,3;UBERON:0002275,1.06e-07,3;UBERON:0002038,1.99e-07,3;UBERON:0009663,1.99e-07,3;UBERON:0009661,1.99e-07,3;UBERON:0000125,1.99e-07,3;UBERON:0002308,1.99e-07,3;UBERON:0000025,2.29e-07,114;UBERON:0004111,3.23e-07,122 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.319984845586813,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.30815093828268,0.878744730937887,1.55543919259427,1.25987779462826,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,0.606949382578793,1.05798195854407,0,0,0,0,0,0,2.09720077362883,1.92109152660777,0.103689612308478,0.270011876663381,0.210324961351382,1.14260393761521,0.883474163806454,0.244981598429908,0.287536413054709,0,4.40463523997555,2.68143409978894,3.37934373163736,0.659431438650969,0.548925861614458,0,3.07101298901519,4.50210088025344,1.68078072554491,1.76777151284201,1.28134512719193,0.559198337475902,0.757261933331841,3.02286240427142,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0,0.125666591329675,0.741584903203122,0,0,0,0,0,0,4.39171195517321,1.25668024088073,0,0,0,0,1.49790639404823,2.74500361691176,0.879580464790051,1.39059456153821,2.55715457330331,1.66230435647648,1.62241263067758,0.611036183101898,0.124406970610093,0,0,0.910843100738926,0.459804208866946,0.720248519221397,0.30140963567143,0.544291993210623,0.384341160854549,0.374806898238915,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0,0,0.233530684734339,0.329119699826961,0,0,0,0,0.134206418760372,2.10289948564127,0.720332286654991,0,0,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0,0.397912944082302,0,0,0,0,0,0,1.1270773567308,0,0.193952487167626,0.350679099451593,0.252946148497029,0.738050739898011,0.627994911365499,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,2.88991061978026,3.28192722458169,0,0,0,0,0,0.238968797952552,0.668396022247182,1.13230612315533,0,0,0.395287777946524,4.17717711348349,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0.847328283455281,0,0.32977250588296,0.161464426695906,0,0.238744688006273,0,0,2.41052892613663,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0,0,0,1.34564891439581,0.496375471371293,0.777804753376191,1.03327858782185,1.01373675294467,0.704143431874524,0.39061315453185,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.19318959403219,0.750729901804728,0.183151624267265,0.214368379079066,0,1.6942555278512,0.920650473014354,1.14579102687879,1.03111909406213,2.05524755931193,3.0215755895588,2.70009000092722,2.2516060161211,2.26571204492102,0.51776031175182,0,0.798049746802062,0.512200817262403,0,0.209613162627982,0.183843508450014,0,0,0,1.26348605881899,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0,0,0.231768651889711,0.38581844092741,0.412085900803307,0,0,0.532427418478012,0.476872379894642,0.290692833264657,0.0941093804153306,0,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.394017929502254,0,0.464810523557898,0.385813221962283,0.249810577937946,0.701794825336225,0,0.956441660344217,0.220591419119515,0.231867835620421 | |||
|short_description=p11@Itgb8 | |||
}} |
Revision as of 20:56, 4 August 2015
Short description: | p11@Itgb8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Itgb8_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | 135bp_to_ENSMUST00000137804_5end |
EntrezGene: | 320910 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.47e-12 | 44 |
neurectodermal cell | 3.47e-12 | 44 |
neural cell | 4.85e-11 | 43 |
migratory neural crest cell | 6.61e-09 | 10 |
neuron associated cell | 6.61e-09 | 10 |
glial cell (sensu Vertebrata) | 6.61e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 6.61e-09 | 10 |
glial cell | 6.61e-09 | 10 |
glioblast | 6.61e-09 | 10 |
glioblast (sensu Vertebrata) | 6.61e-09 | 10 |
oligodendrocyte precursor cell | 3.19e-08 | 8 |
raphe nuclei neuron | 1.06e-07 | 3 |
neuron of the substantia nigra | 1.99e-07 | 3 |
CNS neuron (sensu Vertebrata) | 3.36e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.36e-07 | 23 |
embryonic cell | 8.76e-07 | 70 |