FFCP PHASE1:Mm9::chr7:3391221..3391241,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=328|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:3391221..3391241,+|id=chr7:3391221..3391241,+|ontology_enrichment_celltype=CL:0000117!1.01e-19!23;CL:0000337!1.01e-19!23;CL:0002319!1.04e-11!43;CL:0000540!1.11e-11!33;CL:0000047!1.11e-11!33;CL:0000031!1.11e-11!33;CL:0000404!1.11e-11!33;CL:0000221!2.86e-11!44;CL:0000133!2.86e-11!44;CL:0000055!4.98e-09!50;CL:0000393!6.52e-09!39;CL:0000211!6.52e-09!39|ontology_enrichment_celltype_v019_2=CL:0002610,2.22e-09,3;CL:0002614,5.62e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!8.52e-35!50;UBERON:0006238!8.52e-35!50;UBERON:0001017!2.19e-34!73;UBERON:0005743!2.19e-34!73;UBERON:0001049!5.96e-34!52;UBERON:0005068!5.96e-34!52;UBERON:0006241!5.96e-34!52;UBERON:0007135!5.96e-34!52;UBERON:0002616!1.77e-33!49;UBERON:0000073!4.97e-33!75;UBERON:0001016!4.97e-33!75;UBERON:0002020!6.95e-32!34;UBERON:0002791!1.63e-29!29;UBERON:0003528!1.63e-29!29;UBERON:0001893!1.63e-29!29;UBERON:0000033!5.43e-26!63;UBERON:0003080!5.78e-26!40;UBERON:0002780!7.92e-25!39;UBERON:0001890!7.92e-25!39;UBERON:0006240!7.92e-25!39;UBERON:0002346!3.10e-22!71;UBERON:0003075!3.10e-22!71;UBERON:0007284!3.10e-22!71;UBERON:0000956!2.26e-21!21;UBERON:0001869!2.26e-21!21;UBERON:0000203!2.26e-21!21;UBERON:0004121!6.32e-21!102;UBERON:0000924!6.32e-21!102;UBERON:0006601!6.32e-21!102;UBERON:0003056!2.15e-20!49;UBERON:0002619!3.41e-18!17;UBERON:0007811!2.87e-17!86;UBERON:0000153!1.21e-14!94;UBERON:0002021!7.25e-14!10;UBERON:0000411!7.25e-14!10;UBERON:0001950!7.25e-14!10;UBERON:0002420!4.13e-09!8;UBERON:0007245!4.13e-09!8;UBERON:0010009!4.13e-09!8;UBERON:0010011!4.13e-09!8;UBERON:0000454!4.13e-09!8;UBERON:0000025!4.96e-09!114;UBERON:0004111!3.18e-08!122;UBERON:0003076!3.39e-08!12;UBERON:0003057!3.39e-08!12;UBERON:0000064!1.43e-07!99;UBERON:0002298!1.44e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0003528,4.32e-31,29;UBERON:0002791,4.32e-31,29;UBERON:0001893,4.32e-31,29;UBERON:0000073,8.68e-31,54;UBERON:0002021,1.21e-30,10;UBERON:0000411,1.21e-30,10;UBERON:0001950,1.21e-30,10;UBERON:0000955,2.57e-30,47;UBERON:0006238,2.57e-30,47;UBERON:0001017,3.98e-30,73;UBERON:0003080,6.41e-30,40;UBERON:0001016,3.46e-29,75;UBERON:0002616,4.43e-28,46;UBERON:0002780,9.09e-28,39;UBERON:0001890,9.09e-28,39;UBERON:0006240,9.09e-28,39;UBERON:0001049,9.09e-27,52;UBERON:0005068,9.09e-27,52;UBERON:0006241,9.09e-27,52;UBERON:0007135,9.09e-27,52;UBERON:0002020,5.91e-26,34;UBERON:0002619,7.97e-25,17;UBERON:0003056,1.27e-23,49;UBERON:0000956,2.65e-23,21;UBERON:0001869,2.65e-23,21;UBERON:0000203,2.65e-23,21;UBERON:0004121,5.86e-22,95;UBERON:0000924,5.86e-22,95;UBERON:0006601,5.86e-22,95;UBERON:0002346,7.12e-21,64;UBERON:0003075,7.12e-21,64;UBERON:0007284,7.12e-21,64;UBERON:0010371,1.01e-17,73;UBERON:0010314,4.36e-13,92;UBERON:0002950,1.44e-11,4;UBERON:0001891,1.44e-11,4;UBERON:0009616,1.44e-11,4;UBERON:0010286,1.44e-11,4;UBERON:0000025,1.20e-09,114;UBERON:0004684,2.22e-09,3;UBERON:0002275,2.22e-09,3;UBERON:0002038,5.62e-09,3;UBERON:0009663,5.62e-09,3;UBERON:0009661,5.62e-09,3;UBERON:0000125,5.62e-09,3;UBERON:0002308,5.62e-09,3;UBERON:0002420,9.44e-09,8;UBERON:0007245,9.44e-09,8;UBERON:0010009,9.44e-09,8;UBERON:0010011,9.44e-09,8;UBERON:0000454,9.44e-09,8;UBERON:0004111,1.06e-08,122;UBERON:0011216,5.20e-08,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,1.15265491596466,0.103689612308478,0.270011876663381,0.210324961351382,0.571301968807607,0.441737081903227,0.489963196859816,0.383381884072945,0.919218786610021,1.10115880999389,2.68143409978894,4.76180253094355,0.131886287730194,0.823388792421687,0.52091337055676,1.11673199600552,1.12552522006336,1.68078072554491,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,0.41889341362691,0,0,0,0,2.09706895166752,6.40500843946077,1.00523481690292,9.90798625095976,4.34716277461562,2.90903262383384,3.56930778749067,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6039239820029,1.02904612379284,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,7.06906896127976,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,11.2950368523413,7.36520378411483,6.30185064783336,16.497905504994,2.05524755931193,8.3093328712867,5.40018000185445,9.00642406448441,4.98456649882625,3.62432218226274,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0,0,0,0.377252682772152,0.280924522409647,0.0640251524048693,0.229741875822453,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0.749431733813838,0,0,0,0,0|short_description=p@chr7:3391221..3391241,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=328 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:3391221..3391241,+ | |||
|description=CAGE_peak_at_chr7:3391221..3391241,+ | |||
|id=chr7:3391221..3391241,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.01e-19!23;CL:0000337!1.01e-19!23;CL:0002319!1.04e-11!43;CL:0000540!1.11e-11!33;CL:0000047!1.11e-11!33;CL:0000031!1.11e-11!33;CL:0000404!1.11e-11!33;CL:0000221!2.86e-11!44;CL:0000133!2.86e-11!44;CL:0000055!4.98e-09!50;CL:0000393!6.52e-09!39;CL:0000211!6.52e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.22e-09,3;CL:0002614,5.62e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!8.52e-35!50;UBERON:0006238!8.52e-35!50;UBERON:0001017!2.19e-34!73;UBERON:0005743!2.19e-34!73;UBERON:0001049!5.96e-34!52;UBERON:0005068!5.96e-34!52;UBERON:0006241!5.96e-34!52;UBERON:0007135!5.96e-34!52;UBERON:0002616!1.77e-33!49;UBERON:0000073!4.97e-33!75;UBERON:0001016!4.97e-33!75;UBERON:0002020!6.95e-32!34;UBERON:0002791!1.63e-29!29;UBERON:0003528!1.63e-29!29;UBERON:0001893!1.63e-29!29;UBERON:0000033!5.43e-26!63;UBERON:0003080!5.78e-26!40;UBERON:0002780!7.92e-25!39;UBERON:0001890!7.92e-25!39;UBERON:0006240!7.92e-25!39;UBERON:0002346!3.10e-22!71;UBERON:0003075!3.10e-22!71;UBERON:0007284!3.10e-22!71;UBERON:0000956!2.26e-21!21;UBERON:0001869!2.26e-21!21;UBERON:0000203!2.26e-21!21;UBERON:0004121!6.32e-21!102;UBERON:0000924!6.32e-21!102;UBERON:0006601!6.32e-21!102;UBERON:0003056!2.15e-20!49;UBERON:0002619!3.41e-18!17;UBERON:0007811!2.87e-17!86;UBERON:0000153!1.21e-14!94;UBERON:0002021!7.25e-14!10;UBERON:0000411!7.25e-14!10;UBERON:0001950!7.25e-14!10;UBERON:0002420!4.13e-09!8;UBERON:0007245!4.13e-09!8;UBERON:0010009!4.13e-09!8;UBERON:0010011!4.13e-09!8;UBERON:0000454!4.13e-09!8;UBERON:0000025!4.96e-09!114;UBERON:0004111!3.18e-08!122;UBERON:0003076!3.39e-08!12;UBERON:0003057!3.39e-08!12;UBERON:0000064!1.43e-07!99;UBERON:0002298!1.44e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,4.32e-31,29;UBERON:0002791,4.32e-31,29;UBERON:0001893,4.32e-31,29;UBERON:0000073,8.68e-31,54;UBERON:0002021,1.21e-30,10;UBERON:0000411,1.21e-30,10;UBERON:0001950,1.21e-30,10;UBERON:0000955,2.57e-30,47;UBERON:0006238,2.57e-30,47;UBERON:0001017,3.98e-30,73;UBERON:0003080,6.41e-30,40;UBERON:0001016,3.46e-29,75;UBERON:0002616,4.43e-28,46;UBERON:0002780,9.09e-28,39;UBERON:0001890,9.09e-28,39;UBERON:0006240,9.09e-28,39;UBERON:0001049,9.09e-27,52;UBERON:0005068,9.09e-27,52;UBERON:0006241,9.09e-27,52;UBERON:0007135,9.09e-27,52;UBERON:0002020,5.91e-26,34;UBERON:0002619,7.97e-25,17;UBERON:0003056,1.27e-23,49;UBERON:0000956,2.65e-23,21;UBERON:0001869,2.65e-23,21;UBERON:0000203,2.65e-23,21;UBERON:0004121,5.86e-22,95;UBERON:0000924,5.86e-22,95;UBERON:0006601,5.86e-22,95;UBERON:0002346,7.12e-21,64;UBERON:0003075,7.12e-21,64;UBERON:0007284,7.12e-21,64;UBERON:0010371,1.01e-17,73;UBERON:0010314,4.36e-13,92;UBERON:0002950,1.44e-11,4;UBERON:0001891,1.44e-11,4;UBERON:0009616,1.44e-11,4;UBERON:0010286,1.44e-11,4;UBERON:0000025,1.20e-09,114;UBERON:0004684,2.22e-09,3;UBERON:0002275,2.22e-09,3;UBERON:0002038,5.62e-09,3;UBERON:0009663,5.62e-09,3;UBERON:0009661,5.62e-09,3;UBERON:0000125,5.62e-09,3;UBERON:0002308,5.62e-09,3;UBERON:0002420,9.44e-09,8;UBERON:0007245,9.44e-09,8;UBERON:0010009,9.44e-09,8;UBERON:0010011,9.44e-09,8;UBERON:0000454,9.44e-09,8;UBERON:0004111,1.06e-08,122;UBERON:0011216,5.20e-08,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,1.15265491596466,0.103689612308478,0.270011876663381,0.210324961351382,0.571301968807607,0.441737081903227,0.489963196859816,0.383381884072945,0.919218786610021,1.10115880999389,2.68143409978894,4.76180253094355,0.131886287730194,0.823388792421687,0.52091337055676,1.11673199600552,1.12552522006336,1.68078072554491,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,0.41889341362691,0,0,0,0,2.09706895166752,6.40500843946077,1.00523481690292,9.90798625095976,4.34716277461562,2.90903262383384,3.56930778749067,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6039239820029,1.02904612379284,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,7.06906896127976,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,11.2950368523413,7.36520378411483,6.30185064783336,16.497905504994,2.05524755931193,8.3093328712867,5.40018000185445,9.00642406448441,4.98456649882625,3.62432218226274,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0,0,0,0.377252682772152,0.280924522409647,0.0640251524048693,0.229741875822453,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0.749431733813838,0,0,0,0,0 | |||
|short_description=p@chr7:3391221..3391241,+ | |||
}} |
Latest revision as of 02:45, 5 August 2015
Short description: | p@chr7:3391221..3391241, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:3391221..3391241, + |
Coexpression cluster: | MCL_coexpression_mm9:328 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.22e-09 | 3 |
neuron of the substantia nigra | 5.62e-09 | 3 |