FFCP PHASE1:Mm9::chr9:45178282..45178291,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=59095|HGNC=|MCL_coexpression_id=22|UniProt=Q9D164|association_with_transcript=14bp_to_ENSMUST00000085939,NM_022004,uc009pfs.1,uc009pft.1_5end|description=CAGE_peak_3_at_Fxyd6_5end|id=chr9:45178282..45178291,+|ontology_enrichment_celltype=CL:0000117!4.67e-16!23;CL:0000337!4.67e-16!23;CL:0000540!4.98e-11!33;CL:0000047!4.98e-11!33;CL:0000031!4.98e-11!33;CL:0000404!4.98e-11!33;CL:0000221!8.41e-10!44;CL:0000133!8.41e-10!44;CL:0002319!2.14e-09!43;CL:0000393!5.29e-09!39;CL:0000211!5.29e-09!39;CL:0000055!1.63e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.07e-41,23;CL:0000337,1.07e-41,23;CL:0000540,9.36e-28,33;CL:0000047,9.36e-28,33;CL:0000031,9.36e-28,33;CL:0000404,9.36e-28,33;CL:0000393,2.74e-25,39;CL:0000211,2.74e-25,39;CL:0002319,2.71e-20,43;CL:0000221,9.81e-20,44;CL:0000133,9.81e-20,44;CL:0002321,1.64e-13,70;CL:0002613,1.05e-09,3;CL:0000120,1.37e-09,3;CL:0002612,2.02e-09,3;CL:0000723,2.54e-09,91;CL:0000048,2.54e-09,91;CL:0002610,5.94e-09,3;CL:0000034,1.84e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.83e-13!71;UBERON:0003075!3.83e-13!71;UBERON:0007284!3.83e-13!71;UBERON:0001049!1.11e-12!52;UBERON:0005068!1.11e-12!52;UBERON:0006241!1.11e-12!52;UBERON:0007135!1.11e-12!52;UBERON:0004121!1.41e-12!102;UBERON:0000924!1.41e-12!102;UBERON:0006601!1.41e-12!102;UBERON:0001017!1.65e-12!73;UBERON:0005743!1.65e-12!73;UBERON:0002020!1.73e-12!34;UBERON:0000073!2.67e-12!75;UBERON:0001016!2.67e-12!75;UBERON:0002616!3.17e-11!49;UBERON:0000033!5.95e-11!63;UBERON:0000955!1.18e-10!50;UBERON:0006238!1.18e-10!50;UBERON:0003080!1.52e-09!40;UBERON:0002791!2.86e-09!29;UBERON:0003528!2.86e-09!29;UBERON:0001893!2.86e-09!29;UBERON:0003056!4.39e-09!49;UBERON:0002780!4.66e-09!39;UBERON:0001890!4.66e-09!39;UBERON:0006240!4.66e-09!39|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.21e-23,34;UBERON:0000073,1.04e-20,54;UBERON:0001017,2.76e-19,73;UBERON:0001016,1.25e-18,75;UBERON:0001049,1.46e-15,52;UBERON:0005068,1.46e-15,52;UBERON:0006241,1.46e-15,52;UBERON:0007135,1.46e-15,52;UBERON:0004121,4.77e-15,95;UBERON:0000924,4.77e-15,95;UBERON:0006601,4.77e-15,95;UBERON:0001948,2.61e-14,5;UBERON:0002315,2.61e-14,5;UBERON:0003528,6.37e-14,29;UBERON:0002791,6.37e-14,29;UBERON:0001893,6.37e-14,29;UBERON:0002420,9.27e-13,8;UBERON:0007245,9.27e-13,8;UBERON:0010009,9.27e-13,8;UBERON:0010011,9.27e-13,8;UBERON:0000454,9.27e-13,8;UBERON:0002240,7.17e-12,6;UBERON:0005174,7.17e-12,6;UBERON:0001137,7.17e-12,6;UBERON:0002346,7.51e-12,64;UBERON:0003075,7.51e-12,64;UBERON:0007284,7.51e-12,64;UBERON:0002780,3.27e-11,39;UBERON:0001890,3.27e-11,39;UBERON:0006240,3.27e-11,39;UBERON:0003080,7.41e-11,40;UBERON:0010371,7.13e-10,73;UBERON:0000369,1.17e-09,5;UBERON:0002435,1.17e-09,5;UBERON:0000204,1.17e-09,5;UBERON:0010082,1.17e-09,5;UBERON:0002257,2.02e-09,3;UBERON:0002616,4.72e-09,46;UBERON:0010314,5.38e-09,92;UBERON:0004684,5.94e-09,3;UBERON:0002275,5.94e-09,3;UBERON:0000955,8.49e-09,47;UBERON:0006238,8.49e-09,47;UBERON:0003056,2.56e-08,49|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,1.03134418455488,2.42779753031517,2.11596391708813,3.1691570175309,0,0,0,0,0,0,0.384218305321555,0.725827286159344,0.675029691658453,1.26194976810829,1.99955689082663,1.76694832761291,1.71487118900936,0.766763768145891,3.67687514644008,3.30347642998166,1.14918604276669,1.53606533256243,3.03338461779446,3.56801810049398,2.08365348222704,0.279182999001381,2.25105044012672,2.13917546887534,2.06240009831567,2.27794689278565,2.60959224155421,0.151452386666368,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0.258937883647172,0.445326417194474,0.173485326766136,0.304465478312141,0.691846491768175,0.301445281105245,0.470354828542819,0.251333182659351,0,0.144599356919912,0,0.485300549842228,0.883366073841574,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0.898743836428936,0.457500602818626,1.63350657746724,0.173824320192276,1.27857728665165,1.0389402227978,0.648965052271031,0.81471491080253,0.124406970610093,0,0.420883711772948,0.260240885925407,0,0,0.150704817835715,0.816437989815934,0.512454881139399,0.374806898238915,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0.467061369468678,0.16455984991348,0.32833492815819,0.405344047729279,0.730999937126662,0.219550115291051,0.268412837520744,0.420579897128254,3.60166143327496,0,0,0.853153002140936,0.232236671860439,0.257734922644187,0,0.444756087689741,0.570676878337677,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.568474235311454,0,0,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.642202359951168,0.234423373184406,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,0,0.283880170416537,0.712262414669021,0.81443479676788,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0,0.516856586336442,0.363533729477506,1.06949213515416,0.632073515871632,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0.220528398054962,0.8244312647074,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0.41326727862668,0.785267825952089,0,0,0.56369293868419,0.299033092087958,0.496375471371293,0.777804753376191,0.387479470433193,0.337912250981556,0.704143431874524,1.0416350787516,1.04859344425711,0.483168241652012,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,2.72076460338254,0,0,0,0,0.750729901804728,0.183151624267265,0.214368379079066,0,0.564751842617067,0,0,1.03111909406213,0,0,1.35004500046361,0.900642406448441,1.35942722695261,0.51776031175182,0.518936737920883,0.399024873401031,0.341467211508268,0,0.419226325255965,0.735374033800057,0.44449345560323,0.412070114477788,0.320919209591815,1.01078884705519,0.25347929989024,0,0.37456602987953,0.448176066834085,0.402048282689293,0,0.231768651889711,0.578727661391115,0,0.294397840268795,0.685738504770831,0.177475806159338,0.715308569841963,0.581385666529314,0.376437521661322,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.29551344712669,0,0.309873682371932,0.385813221962283,0.749431733813838,0.701794825336225,0.644613162144895,0.765153328275374,0,0.695603506861264|short_description=p3@Fxyd6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:59095 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D164 | |||
|association_with_transcript=14bp_to_ENSMUST00000085939,NM_022004,uc009pfs.1,uc009pft.1_5end | |||
|cluster_id=chr9:45178282..45178291,+ | |||
|description=CAGE_peak_3_at_Fxyd6_5end | |||
|id=chr9:45178282..45178291,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.67e-16!23;CL:0000337!4.67e-16!23;CL:0000540!4.98e-11!33;CL:0000047!4.98e-11!33;CL:0000031!4.98e-11!33;CL:0000404!4.98e-11!33;CL:0000221!8.41e-10!44;CL:0000133!8.41e-10!44;CL:0002319!2.14e-09!43;CL:0000393!5.29e-09!39;CL:0000211!5.29e-09!39;CL:0000055!1.63e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.07e-41,23;CL:0000337,1.07e-41,23;CL:0000540,9.36e-28,33;CL:0000047,9.36e-28,33;CL:0000031,9.36e-28,33;CL:0000404,9.36e-28,33;CL:0000393,2.74e-25,39;CL:0000211,2.74e-25,39;CL:0002319,2.71e-20,43;CL:0000221,9.81e-20,44;CL:0000133,9.81e-20,44;CL:0002321,1.64e-13,70;CL:0002613,1.05e-09,3;CL:0000120,1.37e-09,3;CL:0002612,2.02e-09,3;CL:0000723,2.54e-09,91;CL:0000048,2.54e-09,91;CL:0002610,5.94e-09,3;CL:0000034,1.84e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.83e-13!71;UBERON:0003075!3.83e-13!71;UBERON:0007284!3.83e-13!71;UBERON:0001049!1.11e-12!52;UBERON:0005068!1.11e-12!52;UBERON:0006241!1.11e-12!52;UBERON:0007135!1.11e-12!52;UBERON:0004121!1.41e-12!102;UBERON:0000924!1.41e-12!102;UBERON:0006601!1.41e-12!102;UBERON:0001017!1.65e-12!73;UBERON:0005743!1.65e-12!73;UBERON:0002020!1.73e-12!34;UBERON:0000073!2.67e-12!75;UBERON:0001016!2.67e-12!75;UBERON:0002616!3.17e-11!49;UBERON:0000033!5.95e-11!63;UBERON:0000955!1.18e-10!50;UBERON:0006238!1.18e-10!50;UBERON:0003080!1.52e-09!40;UBERON:0002791!2.86e-09!29;UBERON:0003528!2.86e-09!29;UBERON:0001893!2.86e-09!29;UBERON:0003056!4.39e-09!49;UBERON:0002780!4.66e-09!39;UBERON:0001890!4.66e-09!39;UBERON:0006240!4.66e-09!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.21e-23,34;UBERON:0000073,1.04e-20,54;UBERON:0001017,2.76e-19,73;UBERON:0001016,1.25e-18,75;UBERON:0001049,1.46e-15,52;UBERON:0005068,1.46e-15,52;UBERON:0006241,1.46e-15,52;UBERON:0007135,1.46e-15,52;UBERON:0004121,4.77e-15,95;UBERON:0000924,4.77e-15,95;UBERON:0006601,4.77e-15,95;UBERON:0001948,2.61e-14,5;UBERON:0002315,2.61e-14,5;UBERON:0003528,6.37e-14,29;UBERON:0002791,6.37e-14,29;UBERON:0001893,6.37e-14,29;UBERON:0002420,9.27e-13,8;UBERON:0007245,9.27e-13,8;UBERON:0010009,9.27e-13,8;UBERON:0010011,9.27e-13,8;UBERON:0000454,9.27e-13,8;UBERON:0002240,7.17e-12,6;UBERON:0005174,7.17e-12,6;UBERON:0001137,7.17e-12,6;UBERON:0002346,7.51e-12,64;UBERON:0003075,7.51e-12,64;UBERON:0007284,7.51e-12,64;UBERON:0002780,3.27e-11,39;UBERON:0001890,3.27e-11,39;UBERON:0006240,3.27e-11,39;UBERON:0003080,7.41e-11,40;UBERON:0010371,7.13e-10,73;UBERON:0000369,1.17e-09,5;UBERON:0002435,1.17e-09,5;UBERON:0000204,1.17e-09,5;UBERON:0010082,1.17e-09,5;UBERON:0002257,2.02e-09,3;UBERON:0002616,4.72e-09,46;UBERON:0010314,5.38e-09,92;UBERON:0004684,5.94e-09,3;UBERON:0002275,5.94e-09,3;UBERON:0000955,8.49e-09,47;UBERON:0006238,8.49e-09,47;UBERON:0003056,2.56e-08,49 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,1.03134418455488,2.42779753031517,2.11596391708813,3.1691570175309,0,0,0,0,0,0,0.384218305321555,0.725827286159344,0.675029691658453,1.26194976810829,1.99955689082663,1.76694832761291,1.71487118900936,0.766763768145891,3.67687514644008,3.30347642998166,1.14918604276669,1.53606533256243,3.03338461779446,3.56801810049398,2.08365348222704,0.279182999001381,2.25105044012672,2.13917546887534,2.06240009831567,2.27794689278565,2.60959224155421,0.151452386666368,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0.258937883647172,0.445326417194474,0.173485326766136,0.304465478312141,0.691846491768175,0.301445281105245,0.470354828542819,0.251333182659351,0,0.144599356919912,0,0.485300549842228,0.883366073841574,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0.898743836428936,0.457500602818626,1.63350657746724,0.173824320192276,1.27857728665165,1.0389402227978,0.648965052271031,0.81471491080253,0.124406970610093,0,0.420883711772948,0.260240885925407,0,0,0.150704817835715,0.816437989815934,0.512454881139399,0.374806898238915,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0.467061369468678,0.16455984991348,0.32833492815819,0.405344047729279,0.730999937126662,0.219550115291051,0.268412837520744,0.420579897128254,3.60166143327496,0,0,0.853153002140936,0.232236671860439,0.257734922644187,0,0.444756087689741,0.570676878337677,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.568474235311454,0,0,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.642202359951168,0.234423373184406,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,0,0.283880170416537,0.712262414669021,0.81443479676788,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0,0.516856586336442,0.363533729477506,1.06949213515416,0.632073515871632,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0.220528398054962,0.8244312647074,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0.41326727862668,0.785267825952089,0,0,0.56369293868419,0.299033092087958,0.496375471371293,0.777804753376191,0.387479470433193,0.337912250981556,0.704143431874524,1.0416350787516,1.04859344425711,0.483168241652012,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,2.72076460338254,0,0,0,0,0.750729901804728,0.183151624267265,0.214368379079066,0,0.564751842617067,0,0,1.03111909406213,0,0,1.35004500046361,0.900642406448441,1.35942722695261,0.51776031175182,0.518936737920883,0.399024873401031,0.341467211508268,0,0.419226325255965,0.735374033800057,0.44449345560323,0.412070114477788,0.320919209591815,1.01078884705519,0.25347929989024,0,0.37456602987953,0.448176066834085,0.402048282689293,0,0.231768651889711,0.578727661391115,0,0.294397840268795,0.685738504770831,0.177475806159338,0.715308569841963,0.581385666529314,0.376437521661322,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.29551344712669,0,0.309873682371932,0.385813221962283,0.749431733813838,0.701794825336225,0.644613162144895,0.765153328275374,0,0.695603506861264 | |||
|short_description=p3@Fxyd6 | |||
}} |
Revision as of 04:52, 5 August 2015
Short description: | p3@Fxyd6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fxyd6_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 14bp_to_ENSMUST00000085939, NM_022004, uc009pfs.1, uc009pft.1_5end |
EntrezGene: | 59095 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.07e-41 | 23 |
neuroblast (sensu Vertebrata) | 1.07e-41 | 23 |
neuron | 9.36e-28 | 33 |
neuronal stem cell | 9.36e-28 | 33 |
neuroblast | 9.36e-28 | 33 |
electrically signaling cell | 9.36e-28 | 33 |
electrically responsive cell | 2.74e-25 | 39 |
electrically active cell | 2.74e-25 | 39 |
neural cell | 2.71e-20 | 43 |
ectodermal cell | 9.81e-20 | 44 |
neurectodermal cell | 9.81e-20 | 44 |
embryonic cell | 1.64e-13 | 70 |
striatum neuron | 1.05e-09 | 3 |
granule cell | 1.37e-09 | 3 |
neuron of the ventral spinal cord | 2.02e-09 | 3 |
somatic stem cell | 2.54e-09 | 91 |
multi fate stem cell | 2.54e-09 | 91 |
raphe nuclei neuron | 5.94e-09 | 3 |
stem cell | 1.84e-08 | 97 |