FFCP PHASE1:Mm9::chr15:81560263..81560274,-: Difference between revisions
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{{FFCP|EntrezGene=19387|HGNC=|MCL_coexpression_id=1|UniProt=E9Q757|association_with_transcript=0bp_to_ENSMUST00000164937_5end|description=CAGE_peak_2_at_Rangap1_5end|id=chr15:81560263..81560274,-|ontology_enrichment_celltype=CL:0002319!2.22e-15!43;CL:0000221!8.74e-15!44;CL:0000133!8.74e-15!44;CL:0000540!9.44e-14!33;CL:0000047!9.44e-14!33;CL:0000031!9.44e-14!33;CL:0000404!9.44e-14!33;CL:0000117!1.37e-12!23;CL:0000337!1.37e-12!23;CL:0000055!1.85e-12!50;CL:0000393!1.61e-10!39;CL:0000211!1.61e-10!39;CL:0002321!1.88e-09!70;CL:0000220!1.88e-09!70;CL:0000548!9.88e-07!115;CL:0000004!9.88e-07!115;CL:0000255!9.88e-07!115|ontology_enrichment_celltype_v019_2=CL:0002319,5.78e-17,43;CL:0000117,1.97e-16,23;CL:0000337,1.97e-16,23;CL:0000221,2.64e-16,44;CL:0000133,2.64e-16,44;CL:0000540,7.93e-16,33;CL:0000047,7.93e-16,33;CL:0000031,7.93e-16,33;CL:0000404,7.93e-16,33;CL:0000393,6.77e-12,39;CL:0000211,6.77e-12,39;CL:0002321,1.23e-11,70;CL:0000034,2.20e-07,97;CL:0000723,8.97e-07,91;CL:0000048,8.97e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.43e-24!73;UBERON:0005743!1.43e-24!73;UBERON:0000073!3.57e-24!75;UBERON:0001016!3.57e-24!75;UBERON:0002020!3.82e-19!34;UBERON:0004121!8.73e-18!102;UBERON:0000924!8.73e-18!102;UBERON:0006601!8.73e-18!102;UBERON:0001049!1.82e-17!52;UBERON:0005068!1.82e-17!52;UBERON:0006241!1.82e-17!52;UBERON:0007135!1.82e-17!52;UBERON:0000955!4.02e-16!50;UBERON:0006238!4.02e-16!50;UBERON:0002791!4.26e-16!29;UBERON:0003528!4.26e-16!29;UBERON:0001893!4.26e-16!29;UBERON:0002616!5.47e-16!49;UBERON:0002346!5.73e-15!71;UBERON:0003075!5.73e-15!71;UBERON:0007284!5.73e-15!71;UBERON:0000033!1.20e-14!63;UBERON:0003056!2.29e-14!49;UBERON:0003080!2.41e-14!40;UBERON:0002780!6.63e-14!39;UBERON:0001890!6.63e-14!39;UBERON:0006240!6.63e-14!39;UBERON:0000956!1.36e-11!21;UBERON:0001869!1.36e-11!21;UBERON:0000203!1.36e-11!21;UBERON:0002619!6.94e-11!17;UBERON:0000153!7.20e-10!94;UBERON:0007811!1.58e-09!86;UBERON:0002021!3.53e-08!10;UBERON:0000411!3.53e-08!10;UBERON:0001950!3.53e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.87e-30,73;UBERON:0001016,1.97e-28,75;UBERON:0002020,1.94e-26,34;UBERON:0000073,8.68e-25,54;UBERON:0004121,1.45e-24,95;UBERON:0000924,1.45e-24,95;UBERON:0006601,1.45e-24,95;UBERON:0002346,1.37e-22,64;UBERON:0003075,1.37e-22,64;UBERON:0007284,1.37e-22,64;UBERON:0001049,1.43e-22,52;UBERON:0005068,1.43e-22,52;UBERON:0006241,1.43e-22,52;UBERON:0007135,1.43e-22,52;UBERON:0003528,8.85e-22,29;UBERON:0002791,8.85e-22,29;UBERON:0001893,8.85e-22,29;UBERON:0010371,1.02e-18,73;UBERON:0003056,2.43e-18,49;UBERON:0003080,5.67e-18,40;UBERON:0002616,1.08e-17,46;UBERON:0002780,2.56e-17,39;UBERON:0001890,2.56e-17,39;UBERON:0006240,2.56e-17,39;UBERON:0000955,4.82e-17,47;UBERON:0006238,4.82e-17,47;UBERON:0002619,5.89e-16,17;UBERON:0000956,6.55e-15,21;UBERON:0001869,6.55e-15,21;UBERON:0000203,6.55e-15,21;UBERON:0002021,8.80e-12,10;UBERON:0000411,8.80e-12,10;UBERON:0001950,8.80e-12,10;UBERON:0010314,1.95e-11,92;UBERON:0011216,1.23e-08,194;UBERON:0002420,4.54e-08,8;UBERON:0007245,4.54e-08,8;UBERON:0010009,4.54e-08,8;UBERON:0010011,4.54e-08,8;UBERON:0000454,4.54e-08,8|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,1.17515490338323,1.40167584357315,0.129123323441576,5.20918271961167,5.61754863172784,2.05461561870606,1.83475965689274,0.171200729931206,0.437102012094987,0.999329285446988,0.607425802169478,1.39912375625629,0.157731082679119,0,0,0.850432901510698,0.198581902401771,0.261199789138935,0.159992422793407,0,0.57423196411502,0.86152399231815,0.646413698057667,0.380046838912748,0.504060259519861,0.443461021310609,2.54012269383853,2.46025915033828,0,0.866554859253824,1.32987716286794,1.02084678131185,0.418531630736908,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0.782391344348039,1.52617609466313,1.97717564461025,2.13872888981712,1.1198913730029,1.43752564364972,0.167782606057736,0.725362142011344,0.336093799142464,0.514518872071894,0.286533439938757,0.515672092277442,5.46254444320914,4.7609188134483,3.80298842103708,0.677689064138264,0.889294796111139,0,0,0,1.19840044207362,1.15265491596466,0.933206510776299,1.62007125998029,0.841299845405528,6.28432165688368,5.96345060569357,2.57230678351403,2.49198224647415,1.83843757322004,5.50579404996943,7.02280359468532,6.45147439676223,5.67111037239834,4.39140689291566,6.25096044668112,4.18774498502071,8.4414391504752,5.34793867218835,5.30331453852602,4.9830088279686,4.47358669980721,0.37863096666592,0.831287161174641,0,0.860423876981386,6.79971333707751,3.2382191498269,0.649776417447669,2.24013443548668,0.702222100658759,0.340860645156116,0.519572009205738,0,0.281686839553361,0,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0.45673551887624,0,0,1.21439728736295,0.913396434936424,0,0.301445281105245,0.352766121407114,0,0.247194967734374,0.289198713839823,0,0,0.441683036920787,0,0,0,0.41889341362691,0.255457055208591,0.838705871541442,0.599902730993408,0.508280908292259,2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19387 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q757 | |||
|association_with_transcript=0bp_to_ENSMUST00000164937_5end | |||
|cluster_id=chr15:81560263..81560274,- | |||
|description=CAGE_peak_2_at_Rangap1_5end | |||
|id=chr15:81560263..81560274,- | |||
|ontology_enrichment_celltype=CL:0002319!2.22e-15!43;CL:0000221!8.74e-15!44;CL:0000133!8.74e-15!44;CL:0000540!9.44e-14!33;CL:0000047!9.44e-14!33;CL:0000031!9.44e-14!33;CL:0000404!9.44e-14!33;CL:0000117!1.37e-12!23;CL:0000337!1.37e-12!23;CL:0000055!1.85e-12!50;CL:0000393!1.61e-10!39;CL:0000211!1.61e-10!39;CL:0002321!1.88e-09!70;CL:0000220!1.88e-09!70;CL:0000548!9.88e-07!115;CL:0000004!9.88e-07!115;CL:0000255!9.88e-07!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.78e-17,43;CL:0000117,1.97e-16,23;CL:0000337,1.97e-16,23;CL:0000221,2.64e-16,44;CL:0000133,2.64e-16,44;CL:0000540,7.93e-16,33;CL:0000047,7.93e-16,33;CL:0000031,7.93e-16,33;CL:0000404,7.93e-16,33;CL:0000393,6.77e-12,39;CL:0000211,6.77e-12,39;CL:0002321,1.23e-11,70;CL:0000034,2.20e-07,97;CL:0000723,8.97e-07,91;CL:0000048,8.97e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.43e-24!73;UBERON:0005743!1.43e-24!73;UBERON:0000073!3.57e-24!75;UBERON:0001016!3.57e-24!75;UBERON:0002020!3.82e-19!34;UBERON:0004121!8.73e-18!102;UBERON:0000924!8.73e-18!102;UBERON:0006601!8.73e-18!102;UBERON:0001049!1.82e-17!52;UBERON:0005068!1.82e-17!52;UBERON:0006241!1.82e-17!52;UBERON:0007135!1.82e-17!52;UBERON:0000955!4.02e-16!50;UBERON:0006238!4.02e-16!50;UBERON:0002791!4.26e-16!29;UBERON:0003528!4.26e-16!29;UBERON:0001893!4.26e-16!29;UBERON:0002616!5.47e-16!49;UBERON:0002346!5.73e-15!71;UBERON:0003075!5.73e-15!71;UBERON:0007284!5.73e-15!71;UBERON:0000033!1.20e-14!63;UBERON:0003056!2.29e-14!49;UBERON:0003080!2.41e-14!40;UBERON:0002780!6.63e-14!39;UBERON:0001890!6.63e-14!39;UBERON:0006240!6.63e-14!39;UBERON:0000956!1.36e-11!21;UBERON:0001869!1.36e-11!21;UBERON:0000203!1.36e-11!21;UBERON:0002619!6.94e-11!17;UBERON:0000153!7.20e-10!94;UBERON:0007811!1.58e-09!86;UBERON:0002021!3.53e-08!10;UBERON:0000411!3.53e-08!10;UBERON:0001950!3.53e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.87e-30,73;UBERON:0001016,1.97e-28,75;UBERON:0002020,1.94e-26,34;UBERON:0000073,8.68e-25,54;UBERON:0004121,1.45e-24,95;UBERON:0000924,1.45e-24,95;UBERON:0006601,1.45e-24,95;UBERON:0002346,1.37e-22,64;UBERON:0003075,1.37e-22,64;UBERON:0007284,1.37e-22,64;UBERON:0001049,1.43e-22,52;UBERON:0005068,1.43e-22,52;UBERON:0006241,1.43e-22,52;UBERON:0007135,1.43e-22,52;UBERON:0003528,8.85e-22,29;UBERON:0002791,8.85e-22,29;UBERON:0001893,8.85e-22,29;UBERON:0010371,1.02e-18,73;UBERON:0003056,2.43e-18,49;UBERON:0003080,5.67e-18,40;UBERON:0002616,1.08e-17,46;UBERON:0002780,2.56e-17,39;UBERON:0001890,2.56e-17,39;UBERON:0006240,2.56e-17,39;UBERON:0000955,4.82e-17,47;UBERON:0006238,4.82e-17,47;UBERON:0002619,5.89e-16,17;UBERON:0000956,6.55e-15,21;UBERON:0001869,6.55e-15,21;UBERON:0000203,6.55e-15,21;UBERON:0002021,8.80e-12,10;UBERON:0000411,8.80e-12,10;UBERON:0001950,8.80e-12,10;UBERON:0010314,1.95e-11,92;UBERON:0011216,1.23e-08,194;UBERON:0002420,4.54e-08,8;UBERON:0007245,4.54e-08,8;UBERON:0010009,4.54e-08,8;UBERON:0010011,4.54e-08,8;UBERON:0000454,4.54e-08,8 | |||
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| |||
|short_description=p2@Rangap1 | |||
}} |
Revision as of 16:44, 5 August 2015
Short description: | p2@Rangap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rangap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000164937_5end |
EntrezGene: | 19387 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.78e-17 | 43 |
CNS neuron (sensu Vertebrata) | 1.97e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.97e-16 | 23 |
ectodermal cell | 2.64e-16 | 44 |
neurectodermal cell | 2.64e-16 | 44 |
neuron | 7.93e-16 | 33 |
neuronal stem cell | 7.93e-16 | 33 |
neuroblast | 7.93e-16 | 33 |
electrically signaling cell | 7.93e-16 | 33 |
electrically responsive cell | 6.77e-12 | 39 |
electrically active cell | 6.77e-12 | 39 |
embryonic cell | 1.23e-11 | 70 |
stem cell | 2.20e-07 | 97 |
somatic stem cell | 8.97e-07 | 91 |
multi fate stem cell | 8.97e-07 | 91 |