FFCP PHASE1:Mm9::chr3:107545476..107545513,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1451|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:107545476..107545513,-|id=chr3:107545476..107545513,-|ontology_enrichment_celltype=CL:0000222!1.49e-07!7;CL:0000333!4.46e-07!10;CL:0000095!4.46e-07!10;CL:0000243!4.46e-07!10;CL:0000123!4.46e-07!10;CL:0000125!4.46e-07!10;CL:0000030!4.46e-07!10;CL:0000339!4.46e-07!10;CL:0000680!6.65e-07!6;CL:0000183!6.65e-07!6;CL:0000187!6.65e-07!6;CL:0000056!6.65e-07!6|ontology_enrichment_celltype_v019_2=CL:0000680,2.16e-22,6;CL:0000187,2.16e-22,6;CL:0000056,2.16e-22,6;CL:0000222,4.06e-19,7;CL:0002453,9.37e-16,8;CL:0000355,9.56e-15,9;CL:0000333,1.69e-12,10;CL:0000095,1.69e-12,10;CL:0000243,1.69e-12,10;CL:0000123,1.69e-12,10;CL:0000125,1.69e-12,10;CL:0000030,1.69e-12,10;CL:0000339,1.69e-12,10;CL:0002494,4.90e-12,3;CL:0000737,4.90e-12,3;CL:0000746,4.90e-12,3;CL:0000513,4.90e-12,3;CL:0000192,5.33e-12,3;CL:0000359,5.33e-12,3;CL:0002539,5.33e-12,3;CL:0000514,5.33e-12,3;CL:0002092,6.31e-12,3;CL:0002540,6.31e-12,3;CL:0000219,1.67e-10,54;CL:0000128,9.60e-10,6;CL:0000126,9.60e-10,6;CL:0000127,9.60e-10,6;CL:0002194,1.59e-08,4;CL:0000766,1.59e-08,4;CL:0000234,1.59e-08,4;CL:0000576,1.59e-08,4;CL:0000235,1.59e-08,4;CL:0000864,1.59e-08,4;CL:0002009,1.59e-08,4;CL:0000040,1.59e-08,4;CL:0000559,1.59e-08,4;CL:0000723,1.93e-08,91;CL:0000048,1.93e-08,91;CL:0000878,2.95e-08,2;CL:0000129,2.95e-08,2;CL:0002603,3.21e-08,2;CL:0002605,5.70e-08,2;CL:0002604,5.70e-08,2;CL:0000034,1.03e-07,97;CL:0002321,1.52e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.56e-15,9;UBERON:0002036,9.56e-15,9;UBERON:0002385,9.56e-15,9;UBERON:0000486,9.56e-15,9;UBERON:0007503,9.56e-15,9;UBERON:0001015,9.56e-15,9;UBERON:0002329,9.56e-15,9;UBERON:0003082,9.56e-15,9;UBERON:0003059,9.56e-15,9;UBERON:0007282,9.56e-15,9;UBERON:0004290,9.56e-15,9;UBERON:0009618,9.56e-15,9;UBERON:0002204,1.39e-14,32;UBERON:0000383,3.26e-13,10;UBERON:0001135,5.33e-12,3;UBERON:0004237,5.33e-12,3;UBERON:0004695,5.33e-12,3;UBERON:0002111,5.33e-12,3;UBERON:0004178,5.33e-12,3;UBERON:0007524,5.85e-12,11;UBERON:0003077,5.85e-12,11;UBERON:0007285,5.85e-12,11;UBERON:0000947,4.14e-09,4;UBERON:0001637,4.14e-09,4;UBERON:0004573,4.14e-09,4;UBERON:0003509,4.14e-09,4;UBERON:0004571,4.14e-09,4;UBERON:0010191,4.14e-09,4;UBERON:0004572,4.14e-09,4;UBERON:0002371,1.02e-07,16;UBERON:0000055,2.29e-07,5;UBERON:0007500,2.29e-07,5;UBERON:0001981,2.29e-07,5;UBERON:0002049,2.29e-07,5;UBERON:0007798,2.29e-07,5;UBERON:0004537,2.29e-07,5;UBERON:0006965,2.29e-07,5|phase1_expression=0,0.348975407639361,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41356317294982,5.06884656097573,1.83546752161682,3.9119567217402,1.74420125104357,1.5378032791413,2.91644848611425,0.979904951377538,0,0,0,0,11.0621557495457,1.71920063963254,6.18806510732931,0,0,0.633831403506179,0.677689064138264,1.77858959222228,3.1496490104849,4.94433181283487,2.8419204597844,2.69640099466564,3.07374644257244,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0,0,1.10115880999389,0,0,0,0.182975287204819,0,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0,0,0.37863096666592,0.226714680320357,0.579728977403356,0,0,0,0.649776417447669,0,0.140444420131752,3.57903677413921,2.33807404142582,2.82671659608272,0,1.28326477414318,0,0,0.216491041011214,0,0,0,0.258937883647172,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0,0,1.86391761218122,0,0.41889341362691,0,0,0,0,0,0,0,0.173824320192276,0,0.41557608911912,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,0.210289948564127,0.102904612379284,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0.275936746304732,0,0,0.819674726883377,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,1.03135543248187,0,0.18006109403131,0.129358683782755,0,0,0.356737635204141,0,0,0,0.21183207086382,0.220528398054962,0,0.322928853391811,0,0,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0.565105371014073,0.136694227721025,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0.15241361331,0,0,0,0,0,0.221985953374065,0,0.335769232728157,0.19318959403219,3.37828455812128,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0.70990322463735,0,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421|short_description=p@chr3:107545476..107545513,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1451 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:107545476..107545513,- | |||
|description=CAGE_peak_at_chr3:107545476..107545513,- | |||
|id=chr3:107545476..107545513,- | |||
|ontology_enrichment_celltype=CL:0000222!1.49e-07!7;CL:0000333!4.46e-07!10;CL:0000095!4.46e-07!10;CL:0000243!4.46e-07!10;CL:0000123!4.46e-07!10;CL:0000125!4.46e-07!10;CL:0000030!4.46e-07!10;CL:0000339!4.46e-07!10;CL:0000680!6.65e-07!6;CL:0000183!6.65e-07!6;CL:0000187!6.65e-07!6;CL:0000056!6.65e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.16e-22,6;CL:0000187,2.16e-22,6;CL:0000056,2.16e-22,6;CL:0000222,4.06e-19,7;CL:0002453,9.37e-16,8;CL:0000355,9.56e-15,9;CL:0000333,1.69e-12,10;CL:0000095,1.69e-12,10;CL:0000243,1.69e-12,10;CL:0000123,1.69e-12,10;CL:0000125,1.69e-12,10;CL:0000030,1.69e-12,10;CL:0000339,1.69e-12,10;CL:0002494,4.90e-12,3;CL:0000737,4.90e-12,3;CL:0000746,4.90e-12,3;CL:0000513,4.90e-12,3;CL:0000192,5.33e-12,3;CL:0000359,5.33e-12,3;CL:0002539,5.33e-12,3;CL:0000514,5.33e-12,3;CL:0002092,6.31e-12,3;CL:0002540,6.31e-12,3;CL:0000219,1.67e-10,54;CL:0000128,9.60e-10,6;CL:0000126,9.60e-10,6;CL:0000127,9.60e-10,6;CL:0002194,1.59e-08,4;CL:0000766,1.59e-08,4;CL:0000234,1.59e-08,4;CL:0000576,1.59e-08,4;CL:0000235,1.59e-08,4;CL:0000864,1.59e-08,4;CL:0002009,1.59e-08,4;CL:0000040,1.59e-08,4;CL:0000559,1.59e-08,4;CL:0000723,1.93e-08,91;CL:0000048,1.93e-08,91;CL:0000878,2.95e-08,2;CL:0000129,2.95e-08,2;CL:0002603,3.21e-08,2;CL:0002605,5.70e-08,2;CL:0002604,5.70e-08,2;CL:0000034,1.03e-07,97;CL:0002321,1.52e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.56e-15,9;UBERON:0002036,9.56e-15,9;UBERON:0002385,9.56e-15,9;UBERON:0000486,9.56e-15,9;UBERON:0007503,9.56e-15,9;UBERON:0001015,9.56e-15,9;UBERON:0002329,9.56e-15,9;UBERON:0003082,9.56e-15,9;UBERON:0003059,9.56e-15,9;UBERON:0007282,9.56e-15,9;UBERON:0004290,9.56e-15,9;UBERON:0009618,9.56e-15,9;UBERON:0002204,1.39e-14,32;UBERON:0000383,3.26e-13,10;UBERON:0001135,5.33e-12,3;UBERON:0004237,5.33e-12,3;UBERON:0004695,5.33e-12,3;UBERON:0002111,5.33e-12,3;UBERON:0004178,5.33e-12,3;UBERON:0007524,5.85e-12,11;UBERON:0003077,5.85e-12,11;UBERON:0007285,5.85e-12,11;UBERON:0000947,4.14e-09,4;UBERON:0001637,4.14e-09,4;UBERON:0004573,4.14e-09,4;UBERON:0003509,4.14e-09,4;UBERON:0004571,4.14e-09,4;UBERON:0010191,4.14e-09,4;UBERON:0004572,4.14e-09,4;UBERON:0002371,1.02e-07,16;UBERON:0000055,2.29e-07,5;UBERON:0007500,2.29e-07,5;UBERON:0001981,2.29e-07,5;UBERON:0002049,2.29e-07,5;UBERON:0007798,2.29e-07,5;UBERON:0004537,2.29e-07,5;UBERON:0006965,2.29e-07,5 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41356317294982,5.06884656097573,1.83546752161682,3.9119567217402,1.74420125104357,1.5378032791413,2.91644848611425,0.979904951377538,0,0,0,0,11.0621557495457,1.71920063963254,6.18806510732931,0,0,0.633831403506179,0.677689064138264,1.77858959222228,3.1496490104849,4.94433181283487,2.8419204597844,2.69640099466564,3.07374644257244,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0,0,1.10115880999389,0,0,0,0.182975287204819,0,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0,0,0.37863096666592,0.226714680320357,0.579728977403356,0,0,0,0.649776417447669,0,0.140444420131752,3.57903677413921,2.33807404142582,2.82671659608272,0,1.28326477414318,0,0,0.216491041011214,0,0,0,0.258937883647172,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0,0,1.86391761218122,0,0.41889341362691,0,0,0,0,0,0,0,0.173824320192276,0,0.41557608911912,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,0.210289948564127,0.102904612379284,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0.275936746304732,0,0,0.819674726883377,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,1.03135543248187,0,0.18006109403131,0.129358683782755,0,0,0.356737635204141,0,0,0,0.21183207086382,0.220528398054962,0,0.322928853391811,0,0,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0.565105371014073,0.136694227721025,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0.15241361331,0,0,0,0,0,0.221985953374065,0,0.335769232728157,0.19318959403219,3.37828455812128,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0.70990322463735,0,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr3:107545476..107545513,- | |||
}} |
Latest revision as of 20:32, 5 August 2015
Short description: | p@chr3:107545476..107545513, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:107545476..107545513, - |
Coexpression cluster: | MCL_coexpression_mm9:1451 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data