FFCP PHASE1:Mm9::chr18:67293152..67293189,+: Difference between revisions
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{{FFCP|EntrezGene=14680|HGNC=|MCL_coexpression_id=90|UniProt=Q8C040|association_with_transcript=-214bp_to_ENSMUST00000171457_5end|description=CAGE_peak_2_at_Gnal_5end|id=chr18:67293152..67293189,+|ontology_enrichment_celltype=CL:0000117!1.26e-15!23;CL:0000337!1.26e-15!23;CL:0000540!2.98e-11!33;CL:0000047!2.98e-11!33;CL:0000031!2.98e-11!33;CL:0000404!2.98e-11!33;CL:0002319!4.06e-09!43;CL:0000221!1.02e-08!44;CL:0000133!1.02e-08!44;CL:0000393!2.60e-08!39;CL:0000211!2.60e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,9.11e-18,23;CL:0000337,9.11e-18,23;CL:0002609,7.37e-12,6;CL:0000540,3.17e-11,33;CL:0000047,3.17e-11,33;CL:0000031,3.17e-11,33;CL:0000404,3.17e-11,33;CL:0000393,6.23e-09,39;CL:0000211,6.23e-09,39;CL:0002319,9.07e-08,43;CL:0000221,1.64e-07,44;CL:0000133,1.64e-07,44;CL:0002608,2.93e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.10e-27!52;UBERON:0005068!2.10e-27!52;UBERON:0006241!2.10e-27!52;UBERON:0007135!2.10e-27!52;UBERON:0000073!3.35e-27!75;UBERON:0001016!3.35e-27!75;UBERON:0000955!2.53e-26!50;UBERON:0006238!2.53e-26!50;UBERON:0001017!6.27e-26!73;UBERON:0005743!6.27e-26!73;UBERON:0002020!1.27e-25!34;UBERON:0002616!2.09e-25!49;UBERON:0002791!4.49e-22!29;UBERON:0003528!4.49e-22!29;UBERON:0001893!4.49e-22!29;UBERON:0003080!1.90e-21!40;UBERON:0002780!1.50e-20!39;UBERON:0001890!1.50e-20!39;UBERON:0006240!1.50e-20!39;UBERON:0002346!8.24e-20!71;UBERON:0003075!8.24e-20!71;UBERON:0007284!8.24e-20!71;UBERON:0000033!2.17e-19!63;UBERON:0004121!2.25e-18!102;UBERON:0000924!2.25e-18!102;UBERON:0006601!2.25e-18!102;UBERON:0000956!8.07e-18!21;UBERON:0001869!8.07e-18!21;UBERON:0000203!8.07e-18!21;UBERON:0003056!5.70e-17!49;UBERON:0002619!2.50e-14!17;UBERON:0002021!6.50e-11!10;UBERON:0000411!6.50e-11!10;UBERON:0001950!6.50e-11!10;UBERON:0007811!3.10e-10!86;UBERON:0000153!3.17e-08!94;UBERON:0000025!8.31e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.53e-45,54;UBERON:0002020,7.23e-42,34;UBERON:0001049,1.67e-41,52;UBERON:0005068,1.67e-41,52;UBERON:0006241,1.67e-41,52;UBERON:0007135,1.67e-41,52;UBERON:0003528,5.29e-37,29;UBERON:0002791,5.29e-37,29;UBERON:0001893,5.29e-37,29;UBERON:0000955,2.06e-36,47;UBERON:0006238,2.06e-36,47;UBERON:0003080,1.71e-35,40;UBERON:0001017,6.42e-35,73;UBERON:0002616,9.68e-35,46;UBERON:0002780,9.14e-34,39;UBERON:0001890,9.14e-34,39;UBERON:0006240,9.14e-34,39;UBERON:0001016,9.49e-34,75;UBERON:0000956,1.93e-32,21;UBERON:0001869,1.93e-32,21;UBERON:0000203,1.93e-32,21;UBERON:0002346,3.91e-32,64;UBERON:0003075,3.91e-32,64;UBERON:0007284,3.91e-32,64;UBERON:0003056,1.25e-27,49;UBERON:0010371,3.97e-27,73;UBERON:0002619,1.76e-25,17;UBERON:0004121,9.36e-25,95;UBERON:0000924,9.36e-25,95;UBERON:0006601,9.36e-25,95;UBERON:0002021,3.32e-20,10;UBERON:0000411,3.32e-20,10;UBERON:0001950,3.32e-20,10;UBERON:0010314,8.94e-20,92;UBERON:0000025,2.49e-14,114;UBERON:0004111,7.72e-13,122;UBERON:0002950,4.34e-08,4;UBERON:0001891,4.34e-08,4;UBERON:0009616,4.34e-08,4;UBERON:0010286,4.34e-08,4;UBERON:0011216,1.64e-07,194;UBERON:0001954,2.03e-07,7;UBERON:0003022,2.03e-07,7;UBERON:0002421,2.03e-07,7;UBERON:0000349,2.03e-07,7;UBERON:0002600,2.03e-07,7;UBERON:0002240,2.17e-07,6;UBERON:0005174,2.17e-07,6;UBERON:0001137,2.17e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,1.14058573539325,3.37514845829227,2.73422449756797,0.285650984403804,1.76694832761291,7.7169203505421,6.80502844229478,5.51531271966013,1.10115880999389,3.31987079021488,3.37934373163736,0.395658863190582,0.274462930807229,0,1.11673199600552,5.06486349028512,3.66715794664344,1.47314292736834,1.13897344639282,1.4911955666024,0.681535739998656,0.604572480854284,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,3.22058876712702,2.51336048176146,0,0,0,0,4.19413790333504,102.480135031372,50.7643582535972,17.7300806596122,21.4800984157478,15.3763152974074,42.0204871345492,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,9.46304768538573,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.937693492737625,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,3.53453448063988,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0.322928853391811,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,0.167884616364078,0,0,0,0,0,5.64751842617067,5.9842280745933,2.29158205375759,5.499301834998,10.2762377965596,7.55393897389701,7.42524750254986,6.75481804836331,10.4222754066367,5.69536342927002,0.103787347584177,0.399024873401031,0,0.486213434136588,0.419226325255965,0.919217542250071,0.44449345560323,0.206035057238894,0,0.505394423527595,0.25347929989024,1.50901073108861,0.749132059759059,0.576226371643824,0.689225627467359,0.476293691283074,1.15884325944855,0.192909220463705,0.824171801606613,0.588795680537589,0.685738504770831,1.06485483695602,0.238436189947321,0.290692833264657,0.564656282491984,0.338458431566706,0.73171189149109,0.526139422875686,0.814824683075171,1.12228454331548,0.949080144993393,0.29551344712669,0,0.619747364743864,0.771626443924566,2.49810577937946,0.467863216890817,0.644613162144895,0,0,0|short_description=p2@Gnal}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14680 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C040 | |||
|association_with_transcript=-214bp_to_ENSMUST00000171457_5end | |||
|cluster_id=chr18:67293152..67293189,+ | |||
|description=CAGE_peak_2_at_Gnal_5end | |||
|id=chr18:67293152..67293189,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.26e-15!23;CL:0000337!1.26e-15!23;CL:0000540!2.98e-11!33;CL:0000047!2.98e-11!33;CL:0000031!2.98e-11!33;CL:0000404!2.98e-11!33;CL:0002319!4.06e-09!43;CL:0000221!1.02e-08!44;CL:0000133!1.02e-08!44;CL:0000393!2.60e-08!39;CL:0000211!2.60e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.11e-18,23;CL:0000337,9.11e-18,23;CL:0002609,7.37e-12,6;CL:0000540,3.17e-11,33;CL:0000047,3.17e-11,33;CL:0000031,3.17e-11,33;CL:0000404,3.17e-11,33;CL:0000393,6.23e-09,39;CL:0000211,6.23e-09,39;CL:0002319,9.07e-08,43;CL:0000221,1.64e-07,44;CL:0000133,1.64e-07,44;CL:0002608,2.93e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.10e-27!52;UBERON:0005068!2.10e-27!52;UBERON:0006241!2.10e-27!52;UBERON:0007135!2.10e-27!52;UBERON:0000073!3.35e-27!75;UBERON:0001016!3.35e-27!75;UBERON:0000955!2.53e-26!50;UBERON:0006238!2.53e-26!50;UBERON:0001017!6.27e-26!73;UBERON:0005743!6.27e-26!73;UBERON:0002020!1.27e-25!34;UBERON:0002616!2.09e-25!49;UBERON:0002791!4.49e-22!29;UBERON:0003528!4.49e-22!29;UBERON:0001893!4.49e-22!29;UBERON:0003080!1.90e-21!40;UBERON:0002780!1.50e-20!39;UBERON:0001890!1.50e-20!39;UBERON:0006240!1.50e-20!39;UBERON:0002346!8.24e-20!71;UBERON:0003075!8.24e-20!71;UBERON:0007284!8.24e-20!71;UBERON:0000033!2.17e-19!63;UBERON:0004121!2.25e-18!102;UBERON:0000924!2.25e-18!102;UBERON:0006601!2.25e-18!102;UBERON:0000956!8.07e-18!21;UBERON:0001869!8.07e-18!21;UBERON:0000203!8.07e-18!21;UBERON:0003056!5.70e-17!49;UBERON:0002619!2.50e-14!17;UBERON:0002021!6.50e-11!10;UBERON:0000411!6.50e-11!10;UBERON:0001950!6.50e-11!10;UBERON:0007811!3.10e-10!86;UBERON:0000153!3.17e-08!94;UBERON:0000025!8.31e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.53e-45,54;UBERON:0002020,7.23e-42,34;UBERON:0001049,1.67e-41,52;UBERON:0005068,1.67e-41,52;UBERON:0006241,1.67e-41,52;UBERON:0007135,1.67e-41,52;UBERON:0003528,5.29e-37,29;UBERON:0002791,5.29e-37,29;UBERON:0001893,5.29e-37,29;UBERON:0000955,2.06e-36,47;UBERON:0006238,2.06e-36,47;UBERON:0003080,1.71e-35,40;UBERON:0001017,6.42e-35,73;UBERON:0002616,9.68e-35,46;UBERON:0002780,9.14e-34,39;UBERON:0001890,9.14e-34,39;UBERON:0006240,9.14e-34,39;UBERON:0001016,9.49e-34,75;UBERON:0000956,1.93e-32,21;UBERON:0001869,1.93e-32,21;UBERON:0000203,1.93e-32,21;UBERON:0002346,3.91e-32,64;UBERON:0003075,3.91e-32,64;UBERON:0007284,3.91e-32,64;UBERON:0003056,1.25e-27,49;UBERON:0010371,3.97e-27,73;UBERON:0002619,1.76e-25,17;UBERON:0004121,9.36e-25,95;UBERON:0000924,9.36e-25,95;UBERON:0006601,9.36e-25,95;UBERON:0002021,3.32e-20,10;UBERON:0000411,3.32e-20,10;UBERON:0001950,3.32e-20,10;UBERON:0010314,8.94e-20,92;UBERON:0000025,2.49e-14,114;UBERON:0004111,7.72e-13,122;UBERON:0002950,4.34e-08,4;UBERON:0001891,4.34e-08,4;UBERON:0009616,4.34e-08,4;UBERON:0010286,4.34e-08,4;UBERON:0011216,1.64e-07,194;UBERON:0001954,2.03e-07,7;UBERON:0003022,2.03e-07,7;UBERON:0002421,2.03e-07,7;UBERON:0000349,2.03e-07,7;UBERON:0002600,2.03e-07,7;UBERON:0002240,2.17e-07,6;UBERON:0005174,2.17e-07,6;UBERON:0001137,2.17e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,1.14058573539325,3.37514845829227,2.73422449756797,0.285650984403804,1.76694832761291,7.7169203505421,6.80502844229478,5.51531271966013,1.10115880999389,3.31987079021488,3.37934373163736,0.395658863190582,0.274462930807229,0,1.11673199600552,5.06486349028512,3.66715794664344,1.47314292736834,1.13897344639282,1.4911955666024,0.681535739998656,0.604572480854284,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,3.22058876712702,2.51336048176146,0,0,0,0,4.19413790333504,102.480135031372,50.7643582535972,17.7300806596122,21.4800984157478,15.3763152974074,42.0204871345492,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,9.46304768538573,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.937693492737625,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,3.53453448063988,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0.322928853391811,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,0.167884616364078,0,0,0,0,0,5.64751842617067,5.9842280745933,2.29158205375759,5.499301834998,10.2762377965596,7.55393897389701,7.42524750254986,6.75481804836331,10.4222754066367,5.69536342927002,0.103787347584177,0.399024873401031,0,0.486213434136588,0.419226325255965,0.919217542250071,0.44449345560323,0.206035057238894,0,0.505394423527595,0.25347929989024,1.50901073108861,0.749132059759059,0.576226371643824,0.689225627467359,0.476293691283074,1.15884325944855,0.192909220463705,0.824171801606613,0.588795680537589,0.685738504770831,1.06485483695602,0.238436189947321,0.290692833264657,0.564656282491984,0.338458431566706,0.73171189149109,0.526139422875686,0.814824683075171,1.12228454331548,0.949080144993393,0.29551344712669,0,0.619747364743864,0.771626443924566,2.49810577937946,0.467863216890817,0.644613162144895,0,0,0 | |||
|short_description=p2@Gnal | |||
}} |
Revision as of 01:34, 6 August 2015
Short description: | p2@Gnal |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gnal_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | -214bp_to_ENSMUST00000171457_5end |
EntrezGene: | 14680 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.11e-18 | 23 |
neuroblast (sensu Vertebrata) | 9.11e-18 | 23 |
neuron of cerebral cortex | 7.37e-12 | 6 |
neuron | 3.17e-11 | 33 |
neuronal stem cell | 3.17e-11 | 33 |
neuroblast | 3.17e-11 | 33 |
electrically signaling cell | 3.17e-11 | 33 |
electrically responsive cell | 6.23e-09 | 39 |
electrically active cell | 6.23e-09 | 39 |
neural cell | 9.07e-08 | 43 |
ectodermal cell | 1.64e-07 | 44 |
neurectodermal cell | 1.64e-07 | 44 |
hippocampal neuron | 2.93e-07 | 3 |