FF:11352-117H2: Difference between revisions

Revision as of 20:44, 9 July 2012

Name:	Neural stem cells, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	brain
dev stage	18 weeks old fetus
sex	unknown
age	embryo 18week
cell type	neural stem cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	2649
catalog number	custom
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.362
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0367
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.288
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.226
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.338
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	1.185
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.375
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.168
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0901
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.142
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.326
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.362
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11384

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	9.23419e-4
MA0003.1	MA0003.1	0.188
MA0004.1	MA0004.1	0.442
MA0006.1	MA0006.1	0.476
MA0007.1	MA0007.1	0.0806
MA0009.1	MA0009.1	0.107
MA0014.1	MA0014.1	0.465
MA0017.1	MA0017.1	0.00388
MA0018.2	MA0018.2	0.005
MA0019.1	MA0019.1	0.991
MA0024.1	MA0024.1	0.00918
MA0025.1	MA0025.1	0.626
MA0027.1	MA0027.1	0.28
MA0028.1	MA0028.1	0.675
MA0029.1	MA0029.1	0.563
MA0030.1	MA0030.1	0.394
MA0031.1	MA0031.1	0.584
MA0035.2	MA0035.2	0.423
MA0038.1	MA0038.1	1.98879e-5
MA0039.2	MA0039.2	0.198
MA0040.1	MA0040.1	0.949
MA0041.1	MA0041.1	0.316
MA0042.1	MA0042.1	0.564
MA0043.1	MA0043.1	0.0889
MA0046.1	MA0046.1	0.632
MA0047.2	MA0047.2	0.0955
MA0048.1	MA0048.1	0.415
MA0050.1	MA0050.1	1.84303e-6
MA0051.1	MA0051.1	0.00706
MA0052.1	MA0052.1	0.586
MA0055.1	MA0055.1	0.0682
MA0057.1	MA0057.1	0.425
MA0058.1	MA0058.1	0.385
MA0059.1	MA0059.1	0.14
MA0060.1	MA0060.1	2.9585e-7
MA0061.1	MA0061.1	0.0738
MA0062.2	MA0062.2	0.178
MA0065.2	MA0065.2	0.00116
MA0066.1	MA0066.1	0.109
MA0067.1	MA0067.1	0.784
MA0068.1	MA0068.1	0.0128
MA0069.1	MA0069.1	0.926
MA0070.1	MA0070.1	0.0198
MA0071.1	MA0071.1	0.0289
MA0072.1	MA0072.1	0.769
MA0073.1	MA0073.1	0.467
MA0074.1	MA0074.1	0.184
MA0076.1	MA0076.1	0.957
MA0077.1	MA0077.1	0.115
MA0078.1	MA0078.1	0.238
MA0079.2	MA0079.2	0.799
MA0080.2	MA0080.2	2.35073e-8
MA0081.1	MA0081.1	0.151
MA0083.1	MA0083.1	0.56
MA0084.1	MA0084.1	0.415
MA0087.1	MA0087.1	0.446
MA0088.1	MA0088.1	0.225
MA0090.1	MA0090.1	0.0681
MA0091.1	MA0091.1	0.465
MA0092.1	MA0092.1	0.48
MA0093.1	MA0093.1	0.515
MA0099.2	MA0099.2	4.72777e-6
MA0100.1	MA0100.1	0.322
MA0101.1	MA0101.1	0.099
MA0102.2	MA0102.2	0.0472
MA0103.1	MA0103.1	0.0363
MA0104.2	MA0104.2	0.716
MA0105.1	MA0105.1	0.0205
MA0106.1	MA0106.1	0.0999
MA0107.1	MA0107.1	0.121
MA0108.2	MA0108.2	0.239
MA0111.1	MA0111.1	0.536
MA0112.2	MA0112.2	2.48492e-4
MA0113.1	MA0113.1	0.0421
MA0114.1	MA0114.1	0.0215
MA0115.1	MA0115.1	0.0865
MA0116.1	MA0116.1	0.013
MA0117.1	MA0117.1	0.8
MA0119.1	MA0119.1	0.158
MA0122.1	MA0122.1	0.604
MA0124.1	MA0124.1	0.366
MA0125.1	MA0125.1	0.0325
MA0131.1	MA0131.1	0.882
MA0135.1	MA0135.1	0.0714
MA0136.1	MA0136.1	3.18955e-5
MA0137.2	MA0137.2	0.687
MA0138.2	MA0138.2	0.615
MA0139.1	MA0139.1	0.383
MA0140.1	MA0140.1	0.0492
MA0141.1	MA0141.1	0.00214
MA0142.1	MA0142.1	0.0538
MA0143.1	MA0143.1	0.0226
MA0144.1	MA0144.1	0.315
MA0145.1	MA0145.1	0.188
MA0146.1	MA0146.1	0.0117
MA0147.1	MA0147.1	0.572
MA0148.1	MA0148.1	0.105
MA0149.1	MA0149.1	0.0176
MA0150.1	MA0150.1	0.00215
MA0152.1	MA0152.1	0.964
MA0153.1	MA0153.1	0.797
MA0154.1	MA0154.1	0.0352
MA0155.1	MA0155.1	0.473
MA0156.1	MA0156.1	1.11616e-4
MA0157.1	MA0157.1	0.0674
MA0159.1	MA0159.1	0.00285
MA0160.1	MA0160.1	0.0245
MA0162.1	MA0162.1	0.129
MA0163.1	MA0163.1	4.01391e-5
MA0164.1	MA0164.1	0.476
MA0258.1	MA0258.1	0.0108
MA0259.1	MA0259.1	0.886

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11384

Novel motif	Logo	P-value
1	1	0.0579
10	10	0.0838
100	100	0.406
101	101	0.571
102	102	0.808
103	103	0.341
104	104	0.153
105	105	0.792
106	106	0.0363
107	107	0.114
108	108	0.615
109	109	9.12025e-4
11	11	0.015
110	110	0.167
111	111	0.114
112	112	0.0826
113	113	0.758
114	114	0.00589
115	115	0.723
116	116	0.262
117	117	0.0213
118	118	0.154
119	119	0.12
12	12	0.938
120	120	0.643
121	121	0.493
122	122	0.935
123	123	0.556
124	124	0.0331
125	125	0.93
126	126	0.0328
127	127	0.324
128	128	0.248
129	129	0.8
13	13	0.015
130	130	0.66
131	131	0.749
132	132	0.862
133	133	0.417
134	134	0.765
135	135	0.567
136	136	0.00654
137	137	0.394
138	138	0.558
139	139	0.177
14	14	0.679
140	140	0.131
141	141	0.45
142	142	0.657
143	143	0.0188
144	144	0.731
145	145	0.366
146	146	0.88
147	147	0.938
148	148	0.0686
149	149	0.0333
15	15	0.119
150	150	0.219
151	151	0.434
152	152	0.0333
153	153	0.725
154	154	0.699
155	155	0.31
156	156	0.247
157	157	0.271
158	158	0.773
159	159	0.723
16	16	0.0273
160	160	0.108
161	161	0.243
162	162	0.794
163	163	0.728
164	164	0.0108
165	165	0.639
166	166	0.925
167	167	0.188
168	168	0.438
169	169	0.0122
17	17	0.0757
18	18	0.387
19	19	0.159
2	2	0.697
20	20	0.301
21	21	0.0211
22	22	0.132
23	23	0.23
24	24	0.142
25	25	0.633
26	26	0.00837
27	27	0.506
28	28	0.922
29	29	0.0244
3	3	0.0288
30	30	0.843
31	31	0.831
32	32	0.0119
33	33	0.305
34	34	0.747
35	35	0.65
36	36	0.182
37	37	0.0268
38	38	0.214
39	39	0.2
4	4	0.529
40	40	0.0457
41	41	0.938
42	42	0.196
43	43	0.163
44	44	0.0129
45	45	0.752
46	46	0.127
47	47	0.0539
48	48	0.0516
49	49	0.245
5	5	0.274
50	50	0.332
51	51	0.598
52	52	0.639
53	53	0.888
54	54	0.464
55	55	0.264
56	56	0.335
57	57	0.477
58	58	0.196
59	59	0.04
6	6	0.445
60	60	0.0862
61	61	0.0194
62	62	0.156
63	63	0.0989
64	64	0.29
65	65	0.143
66	66	0.992
67	67	0.692
68	68	0.545
69	69	0.247
7	7	0.269
70	70	0.00985
71	71	0.0095
72	72	0.3
73	73	0.00944
74	74	0.131
75	75	0.0327
76	76	0.266
77	77	0.0851
78	78	0.0119
79	79	0.00711
8	8	0.0481
80	80	0.802
81	81	0.375
82	82	0.136
83	83	0.157
84	84	0.668
85	85	0.0615
86	86	0.332
87	87	0.0236
88	88	0.543
89	89	0.571
9	9	0.46
90	90	0.763
91	91	0.877
92	92	0.28
93	93	0.738
94	94	0.118
95	95	0.00183
96	96	0.978
97	97	0.912
98	98	0.359
99	99	0.348

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11384

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000120 human neural stem cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000047 (neuronal stem cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000255 (eukaryotic cell)
0000034 (stem cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0004121 (ectoderm-derived structure)
0011216 (organ system subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000120 (human neural stem cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr14:29235961..29236008,+!p1@FOXG1!2.55!357.88!FOXG1;;chr17:37764128..37764258,-!p1@NEUROD2!2.47!294.12!NEUROD2;;chr7:31380292..31380351,-!p1@NEUROD6!2.38!238.16!NEUROD6;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!2.37!232.95!POU3F3;;chrX:25034067..25034088,-!p1@ARX!2.17!148.36!ARX;;chr14:29236269..29236285,+!p3@FOXG1!2.10!123.63!FOXG1;;chr14:29236301..29236317,+!p5@FOXG1!2.10!123.63!FOXG1;;chr2:162272785..162272836,+!p1@TBR1!2.04!108.02!TBR1;;chr1:244214577..244214593,+!p1@ZNF238!2.01!101.51!ZNF238;;chr1:151032922..151032951,+!p2@MLLT11!1.98!152.26!MLLT11;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.95!88.50!POU3F3;;chr3:181429704..181429722,+!p1@SOX2!1.95!87.19!SOX2;;chr2:200322229..200322251,-!p3@SATB2!1.94!85.89!SATB2;;chr14:29234581..29234601,+!p2@FOXG1!1.94!85.89!FOXG1;;chr19:13134772..13134822,+!p2@NFIX!1.92!118.43!NFIX;;chr7:100065686..100065701,-!p2@TSC22D4!1.91!79.39!TSC22D4;;chr4:81118647..81118666,+!p1@PRDM8!1.86!93.70!PRDM8;;chr2:162272889..162272915,+!p2@TBR1!1.84!68.97!TBR1;;chr16:51185172..51185197,-!p1@SALL1!1.82!65.07!SALL1;;chr9:126774018..126774055,+!p1@LHX2!1.81!63.77!LHX2;;chr4:113437332..113437337,-!p1@NEUROG2!1.79!61.17!NEUROG2;;chr4:57547454..57547469,-!p1@HOPX!1.78!59.86!HOPX;;chr20:20348740..20348757,+!p1@INSM1!1.78!59.86!INSM1;;chr3:181429741..181429767,+!p2@SOX2!1.77!57.26!SOX2;;chr14:33403881..33403924,+!p1@NPAS3!1.72!52.06!NPAS3;;chr11:31832658..31832681,-!p1@PAX6!1.70!49.45!PAX6;;chr2:200322723..200322739,-!p6@SATB2!1.70!49.45!SATB2;;chr2:5832508..5832524,+!p1@SOX11!1.67!45.55!SOX11;;chr9:14308004..14308041,-!p14@NFIB!1.67!45.55!NFIB;;chr2:16080659..16080685,+!p1@MYCN!1.66!44.25!MYCN;;chr9:126773880..126773895,+!p2@LHX2!1.64!42.95!LHX2;;chr1:151032860..151032918,+!p1@MLLT11!1.63!472.41!MLLT11;;chr2:166326200..166326216,+!p1@CSRNP3!1.63!59.86!CSRNP3;;chr2:2334997..2335053,-!p1@MYT1L!1.62!40.34!MYT1L;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.62!40.34!PEG3;;chr12:103351444..103351461,+!p1@ASCL1!1.60!39.04!ASCL1;;chr5:88178983..88179012,-!p1@MEF2C!1.58!271.99!MEF2C;;chr7:96654133..96654150,-!p1@DLX5!1.57!36.44!DLX5;;chr2:182545234..182545252,-!p1@NEUROD1!1.57!36.44!NEUROD1;;chrX:84498989..84499003,+!p1@ZNF711!1.56!48.15!ZNF711;;chr2:172967621..172967637,-!p1@DLX2!1.54!87.19!DLX2;;chr9:126774058..126774081,+!p3@LHX2!1.54!33.84!LHX2;;chr19:38720294..38720348,-!p1@DPF1!1.51!39.04!DPF1;;chr8:40755333..40755352,-!p1@ZMAT4!1.51!31.23!ZMAT4;;chr11:31832862..31832884,-!p2@PAX6!1.49!29.93!PAX6;;chr12:24102576..24102623,-!p2@SOX5!1.49!29.93!SOX5;;chr14:73360799..73360817,-!p1@DPF3!1.48!97.60!DPF3;;chr9:77112244..77112262,+!p1@RORB!1.48!32.53!RORB;;chrX:82763292..82763317,+!p1@POU3F4!1.47!28.63!POU3F4;;chr14:29237009..29237049,+!p4@FOXG1!1.47!28.63!FOXG1;;chr6:21594206..21594221,+!p15@SOX4!1.47!28.63!SOX4;;chr19:13135582..13135600,+!p3@NFIX!1.45!27.33!NFIX;;chr2:166428839..166428859,+!p2@CSRNP3!1.45!27.33!CSRNP3;;chr2:5832493..5832507,+!p2@SOX11!1.45!27.33!SOX11;;chr9:14314131..14314147,-!p2@NFIB!1.44!144.46!NFIB;;chr2:105470614..105470625,+!p@chr2:105470614..105470625,+!1.43!26.03!POU3F3;;chr2:200322259..200322280,-!p5@SATB2!1.43!26.03!SATB2;;chr1:151032957..151032968,+!p7@MLLT11!1.43!26.03!MLLT11;;chr6:99282592..99282616,+!p3@POU3F2!1.41!24.73!POU3F2;;chr2:200322654..200322707,-!p2@SATB2!1.40!35.14!SATB2;;chr17:70117153..70117174,+!p1@SOX9!1.39!235.55!SOX9;;chr18:56532100..56532130,+!p1@ZNF532!1.39!42.95!ZNF532;;chr1:214161272..214161322,+!p1@PROX1!1.39!32.53!PROX1;;chr15:80696703..80696754,+!p1@ARNT2!1.39!31.23!ARNT2;;chr2:145275982..145276003,-!p7@ZEB2!1.39!23.43!ZEB2;;chr13:72441315..72441454,-!p1@DACH1!1.36!42.95!DACH1;;chr1:2461692..2461710,-!p1@HES5!1.36!22.12!HES5;;chr2:2335109..2335134,-!p2@MYT1L!1.36!22.12!MYT1L;;chr6:19837592..19837621,+!p1@ID4!1.35!126.24!ID4;;chr5:178368186..178368238,+!p1@ZNF454!1.35!37.74!ZNF454;;chrX:84499081..84499115,+!p2@ZNF711!1.35!31.23!ZNF711;;chr15:57511609..57511651,+!p2@TCF12!1.34!35.14!TCF12;;chr18:53068911..53068935,-!p4@TCF4!1.34!23.43!TCF4;;chr2:63277948..63277974,+!p1@OTX1!1.34!20.82!OTX1;;chr1:244214611..244214624,+!p4@ZNF238!1.34!20.82!ZNF238;;chr9:109625401..109625458,+!p1@ZNF462!1.32!52.06!ZNF462;;chr1:23696348..23696363,-!p4@ZNF436!1.32!22.12!ZNF436;;chr14:58798013..58798071,+!p2@ARID4A!1.31!19.52!ARID4A;;chr2:105470599..105470610,+!p@chr2:105470599..105470610,+!1.31!19.52!POU3F3;;chr2:200320768..200320800,-!p4@SATB2!1.31!19.52!SATB2;;chr15:37392724..37392757,-!p1@MEIS2!1.28!81.99!MEIS2;;chr9:14313893..14313908,-!p7@NFIB!1.28!26.03!NFIB;;chr2:162272716..162272753,+!p3@TBR1!1.28!18.22!TBR1;;chr18:53069419..53069450,-!p34@TCF4!1.28!18.22!TCF4;;chr2:145277882..145277967,-!p3@ZEB2!1.27!29.93!ZEB2;;chr2:63277978..63277995,+!p2@OTX1!1.25!16.92!OTX1;;chr8:65492756..65492768,+!p2@BHLHE22!1.25!16.92!BHLHE22;;chr18:53089453..53089482,-!p11@TCF4!1.25!16.92!TCF4;;chr10:119302232..119302265,+!p1@EMX2!1.25!16.92!EMX2;;chr3:141105705..141105770,+!p4@ZBTB38!1.23!19.52!ZBTB38;;chr2:16642886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.60!SMARCA2;;chr18:45457558..45457570,-!p9@SMAD2!0.47!2.60!SMAD2;;chr18:56530573..56530591,+!p9@ZNF532!0.47!2.60!ZNF532;;chr19:35759387..35759398,+!p6@USF2!0.47!2.60!USF2;;chr19:37998036..37998098,+!p2@ZNF793!0.47!2.60!ZNF793;;chr13:46626847..46626899,-!p1@ZC3H13!0.46!81.99!ZC3H13;;chr18:32924372..32924430,-!p1@ZNF24!0.46!79.39!ZNF24;;chr7:135194822..135194860,-!p1@CNOT4!0.46!68.97!CNOT4;;chr12:56583243..56583293,-!p1@SMARCC2!0.46!63.77!SMARCC2;;chr19:58125580..58125639,+!p1@ZNF134!0.46!41.64!ZNF134;;chr1:200379129..200379174,-!p1@ZNF281!0.46!31.23!ZNF281;;chr20:33413416..33413466,-!p1@NCOA6!0.46!31.23!NCOA6;;chr19:57946684..57946723,+!p1@ZNF749!0.46!28.63!ZNF749;;chr19:58790314..58790358,+!p1@ZNF8!0.46!19.52!ZNF8;;chr6:33422343..33422394,+!p1@ZBTB9!0.46!16.92!ZBTB9;;chr17:47439568..47439641,-!p2@ZNF652!0.46!14.32!ZNF652;;chr17:42298615..42298692,-!p2@UBTF!0.46!13.01!UBTF;;chr2:157189180..157189290,-!p1@NR4A2!0.46!13.01!NR4A2;;chr19:58400372..58400411,-!p1@ZNF814!0.46!13.01!ZNF814;;chr9:32552577..32552627,-!p1@TOPORS!0.46!13.01!TOPORS;;chr12:57400261..57400344,-!p1@ZBTB39!0.46!11.71!ZBTB39;;chr4:83821835..83821896,+!p1@THAP9!0.46!7.81!THAP9;;chr15:37393449..37393528,-!p4@MEIS2!0.46!6.51!MEIS2;;chr19:58446721..58446779,-!p1@ZNF418!0.46!6.51!ZNF418;;chr19:52408227..52408243,-!p2@ZNF649!0.46!5.21!ZNF649;;chr6:151712800..151712835,-!p2@ZBTB2!0.46!5.21!ZBTB2;;chr18:32957260..32957309,-!p1@ZNF396!0.46!5.21!ZNF396;;chr16:30798476..30798483,-!p2@ZNF629!0.46!2.60!ZNF629;;chr19:49139477..49139552,-!p4@DBP!0.46!2.60!DBP;;chr19:56988864..56988924,-!p2@ZNF667!0.46!2.60!ZNF667;;chr1:151032739..151032748,+!p6@MLLT11!0.46!2.60!MLLT11;;chr8:60031809..60031835,-!p4@TOX!0.46!2.60!TOX;;chr6:136610911..136610990,-!p1@BCLAF1!0.45!225.14!BCLAF1;;chr7:74072021..74072119,+!p1@GTF2I!0.45!66.37!GTF2I;;chr19:53606636..53606692,-!p1@ZNF160!0.45!46.85!ZNF160;;chr19:9785743..9785784,-!p1@ZNF562!0.45!37.74!ZNF562;;chrX:119384629..119384720,+!p1@ZBTB33!0.45!33.84!ZBTB33;;chr1:151431909..151431987,-!p1@POGZ!0.45!29.93!POGZ;;chr16:69419794..69419830,-!p3@TERF2!0.45!11.71!TERF2;;chr17:11900745..11900804,-!p1@ZNF18!0.45!9.11!ZNF18;;chr19:38210622..38210681,-!p1@ZNF607!0.45!9.11!ZNF607;;chr3:179040643..179040740,+!p2@ZNF639!0.45!9.11!ZNF639;;chr3:52001426..52001447,-!p3@PCBP4!0.45!6.51!PCBP4;;chr10:76586311..76586341,+!p2@KAT6B!0.45!6.51!KAT6B;;chr12:104532004..104532033,-!p4@NFYB!0.45!6.51!NFYB;;chr5:43121607..43121649,+!p4@ZNF131!0.45!6.51!ZNF131;;chr19:35225078..35225120,+!p2@ZNF181!0.45!5.21!ZNF181;;chr16:30621615..30621660,-!p2@ZNF689!0.45!3.90!ZNF689;;chr4:206390..206444,+!p1@ZNF876P!0.45!3.90!ZNF876P;;chr10:97890262..97890298,+!p4@ZNF518A!0.45!3.90!ZNF518A;;chr12:53574398..53574412,+!p3@ZNF740!0.45!3.90!ZNF740;;chr6:21594391..21594431,+!p9@SOX4!0.45!2.60!SOX4;;chr6:43139102..43139112,+!p7@SRF!0.45!2.60!SRF;;chr3:37216069..37216075,-!p4@LRRFIP2!0.45!2.60!LRRFIP2;;chrX:119384749..119384763,+!p4@ZBTB33!0.45!2.60!ZBTB33;;chr2:48541789..48541874,+!p1@FOXN2!0.44!55.96!FOXN2;;chr19:12721725..12721758,+!p1@ZNF791!0.44!42.95!ZNF791;;chr6:28109608..28109693,+!p1@ZNF192!0.44!41.64!ZNF192;;chr8:144718171..144718244,+!p1@ZNF623!0.44!26.03!ZNF623;;chr4:10459009..10459061,-!p1@ZNF518B!0.44!22.12!ZNF518B;;chr2:113033164..113033219,+!p1@ZC3H6!0.44!20.82!ZC3H6;;chr4:18023350..18023385,-!p1@LCORL!0.44!20.82!LCORL;;chr1:28995258..28995322,+!p1@GMEB1!0.44!18.22!GMEB1;;chr10:44144292..44144338,-!p1@ZNF32!0.44!15.62!ZNF32;;chr9:4300050..4300118,-!p1@GLIS3!0.44!15.62!GLIS3;;chr19:52643169..52643199,-!p1@ZNF616!0.44!14.32!ZNF616;;chr7:101459230..101459243,+!p2@CUX1!0.44!11.71!CUX1;;chr10:97889784..97889827,+!p1@ZNF518A!0.44!11.71!ZNF518A;;chr19:44576296..44576343,+!p2@ZNF284!0.44!9.11!ZNF284;;chr20:3388541..3388575,-!p2@C20orf194!0.44!9.11!C20orf194;;chr19:53970970..53971021,+!p1@ZNF813!0.44!5.21!ZNF813;;chr20:25677443..25677464,-!p2@ZNF337!0.44!5.21!ZNF337;;chr16:79634595..79634620,-!p2@MAF!0.44!3.90!MAF;;chr19:13136130..13136165,+!p6@NFIX!0.44!2.60!NFIX;;chr11:12696071..12696086,+!p3@TEAD1!0.44!2.60!TEAD1;;chr12:133613902..133613924,+!p4@ZNF84!0.44!2.60!ZNF84;;chr4:146402795..146402816,+!p7@SMAD1!0.44!2.60!SMAD1;;
+|ffid_belonging_in_development=CL:0000133,CL:0000221
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11352-117H2: Difference between revisions

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Revision as of 20:44, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0