FFCP PHASE1:Mm9::chr4:114806709..114806726,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=81906 | |EntrezGene=81906 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=Q6A152 | |UniProt=Q6A152 | ||
|association_with_transcript=-127bp_to_ENSMUST00000051400,NM_001003947,uc008uep.1_5end | |||
|cluster_id=chr4:114806709..114806726,- | |||
|description=CAGE_peak_3_at_Cyp4x1_5end | |||
|id=chr4:114806709..114806726,- | |||
|ontology_enrichment_celltype=CL:0000117!3.00e-25!23;CL:0000337!3.00e-25!23;CL:0000540!1.11e-19!33;CL:0000047!1.11e-19!33;CL:0000031!1.11e-19!33;CL:0000404!1.11e-19!33;CL:0000393!3.04e-15!39;CL:0000211!3.04e-15!39;CL:0002319!5.33e-14!43;CL:0000221!1.78e-13!44;CL:0000133!1.78e-13!44;CL:0000055!8.36e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.04e-44,23;CL:0000337,2.04e-44,23;CL:0000540,2.60e-30,33;CL:0000047,2.60e-30,33;CL:0000031,2.60e-30,33;CL:0000404,2.60e-30,33;CL:0000393,2.60e-25,39;CL:0000211,2.60e-25,39;CL:0002319,9.45e-23,43;CL:0000221,3.49e-22,44;CL:0000133,3.49e-22,44;CL:0000120,2.14e-15,3;CL:0002612,2.14e-15,3;CL:0002321,4.33e-13,70;CL:0002611,1.04e-10,2;CL:0000723,1.62e-09,91;CL:0000048,1.62e-09,91;CL:0000034,8.86e-09,97;CL:0002613,2.36e-07,3;CL:0002610,4.80e-07,3;CL:0002614,7.29e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.45e-23!75;UBERON:0001016!1.45e-23!75;UBERON:0001017!1.52e-23!73;UBERON:0005743!1.52e-23!73;UBERON:0001049!1.11e-20!52;UBERON:0005068!1.11e-20!52;UBERON:0006241!1.11e-20!52;UBERON:0007135!1.11e-20!52;UBERON:0000033!1.89e-19!63;UBERON:0002346!1.27e-18!71;UBERON:0003075!1.27e-18!71;UBERON:0007284!1.27e-18!71;UBERON:0004121!2.00e-18!102;UBERON:0000924!2.00e-18!102;UBERON:0006601!2.00e-18!102;UBERON:0000955!2.34e-18!50;UBERON:0006238!2.34e-18!50;UBERON:0002616!1.21e-17!49;UBERON:0002020!2.87e-17!34;UBERON:0003056!1.92e-14!49;UBERON:0003080!1.52e-12!40;UBERON:0002791!5.15e-12!29;UBERON:0003528!5.15e-12!29;UBERON:0001893!5.15e-12!29;UBERON:0002780!1.16e-11!39;UBERON:0001890!1.16e-11!39;UBERON:0006240!1.16e-11!39;UBERON:0007811!6.92e-11!86;UBERON:0003076!1.32e-09!12;UBERON:0003057!1.32e-09!12;UBERON:0002420!1.49e-09!8;UBERON:0007245!1.49e-09!8;UBERON:0010009!1.49e-09!8;UBERON:0010011!1.49e-09!8;UBERON:0000454!1.49e-09!8;UBERON:0000153!5.72e-09!94;UBERON:0002240!3.23e-08!6;UBERON:0005174!3.23e-08!6;UBERON:0001137!3.23e-08!6;UBERON:0002298!1.04e-07!6;UBERON:0001948!1.50e-07!5;UBERON:0002315!1.50e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.94e-24,5;UBERON:0002315,1.94e-24,5;UBERON:0002240,2.36e-20,6;UBERON:0005174,2.36e-20,6;UBERON:0001137,2.36e-20,6;UBERON:0001017,1.77e-18,73;UBERON:0001016,6.43e-18,75;UBERON:0000073,3.14e-17,54;UBERON:0002257,2.14e-15,3;UBERON:0004121,1.31e-13,95;UBERON:0000924,1.31e-13,95;UBERON:0006601,1.31e-13,95;UBERON:0001049,3.04e-13,52;UBERON:0005068,3.04e-13,52;UBERON:0006241,3.04e-13,52;UBERON:0007135,3.04e-13,52;UBERON:0002020,1.36e-12,34;UBERON:0002256,1.04e-10,2;UBERON:0002950,1.04e-10,4;UBERON:0001891,1.04e-10,4;UBERON:0009616,1.04e-10,4;UBERON:0010286,1.04e-10,4;UBERON:0002346,2.24e-10,64;UBERON:0003075,2.24e-10,64;UBERON:0007284,2.24e-10,64;UBERON:0003076,4.18e-10,12;UBERON:0003057,4.18e-10,12;UBERON:0002420,1.64e-09,8;UBERON:0007245,1.64e-09,8;UBERON:0010009,1.64e-09,8;UBERON:0010011,1.64e-09,8;UBERON:0000454,1.64e-09,8;UBERON:0010371,7.69e-09,73;UBERON:0004684,4.80e-07,3;UBERON:0002275,4.80e-07,3;UBERON:0002038,7.29e-07,3;UBERON:0009663,7.29e-07,3;UBERON:0009661,7.29e-07,3;UBERON:0000125,7.29e-07,3;UBERON:0002308,7.29e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,4.23192783417626,3.80298842103708,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,3.71346279724945,1.98781686856452,0.489963196859816,0.575072826109418,1.83843757322004,2.20231761998777,1.14918604276669,0.921639199537461,1.97829431595291,2.47016637726506,0.52091337055676,1.3959149950069,0.56276261003168,1.37518422999129,4.12480019663135,2.27794689278565,2.05039390407831,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,1.64769703345305,0.457500602818626,0.628271760564322,0.521472960576829,0.255715457330331,1.24672826735736,1.1356888414743,0,0,0,0,0,0.459804208866946,0.180062129805349,0.150704817835715,0.272145996605311,0.12811372028485,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.703270119553219,0,0,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0,0.37456602987953,0.128050304809739,0.402048282689293,1.42888107384922,0.231768651889711,0.192909220463705,0,0.735994600671987,0,0,0.476872379894642,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0,0,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,4.23192783417626,3.80298842103708,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,3.71346279724945,1.98781686856452,0.489963196859816,0.575072826109418,1.83843757322004,2.20231761998777,1.14918604276669,0.921639199537461,1.97829431595291,2.47016637726506,0.52091337055676,1.3959149950069,0.56276261003168,1.37518422999129,4.12480019663135,2.27794689278565,2.05039390407831,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,1.64769703345305,0.457500602818626,0.628271760564322,0.521472960576829,0.255715457330331,1.24672826735736,1.1356888414743,0,0,0,0,0,0.459804208866946,0.180062129805349,0.150704817835715,0.272145996605311,0.12811372028485,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.703270119553219,0,0,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0,0.37456602987953,0.128050304809739,0.402048282689293,1.42888107384922,0.231768651889711,0.192909220463705,0,0.735994600671987,0,0,0.476872379894642,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0,0,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0 | ||
|short_description=p3@Cyp4x1 | |||
}} | }} |
Latest revision as of 04:33, 26 September 2015
Short description: | p3@Cyp4x1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cyp4x1_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -127bp_to_ENSMUST00000051400, NM_001003947, uc008uep.1_5end |
EntrezGene: | Cyp4x1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.04e-44 | 23 |
neuroblast (sensu Vertebrata) | 2.04e-44 | 23 |
neuron | 2.60e-30 | 33 |
neuronal stem cell | 2.60e-30 | 33 |
neuroblast | 2.60e-30 | 33 |
electrically signaling cell | 2.60e-30 | 33 |
electrically responsive cell | 2.60e-25 | 39 |
electrically active cell | 2.60e-25 | 39 |
neural cell | 9.45e-23 | 43 |
ectodermal cell | 3.49e-22 | 44 |
neurectodermal cell | 3.49e-22 | 44 |
granule cell | 2.14e-15 | 3 |
neuron of the ventral spinal cord | 2.14e-15 | 3 |
embryonic cell | 4.33e-13 | 70 |
neuron of the dorsal spinal cord | 1.04e-10 | 2 |
somatic stem cell | 1.62e-09 | 91 |
multi fate stem cell | 1.62e-09 | 91 |
stem cell | 8.86e-09 | 97 |
striatum neuron | 2.36e-07 | 3 |
raphe nuclei neuron | 4.80e-07 | 3 |
neuron of the substantia nigra | 7.29e-07 | 3 |