FFCP PHASE1:Hg19::chr1:186646037..186646054,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:186646037..186646054,- | |||
|coexpression_cluster_id=C107 | |coexpression_cluster_id=C107 | ||
|description=CAGE_peak_at_chr1:186646037..186646054,- | |description=CAGE_peak_at_chr1:186646037..186646054,- | ||
|id=chr1:186646037..186646054,- | |id=chr1:186646037..186646054,- | ||
|ontology_enrichment_celltype=CL:0000860!9.75e-26!45;CL:0002057!3.09e-23!42;CL:0000766!1.04e-22!76;CL:0000557!3.19e-19!71;CL:0000839!3.24e-18!70;CL:0002009!4.56e-18!65;CL:0002194!1.72e-17!63;CL:0000576!1.72e-17!63;CL:0000040!1.72e-17!63;CL:0000559!1.72e-17!63;CL:0000763!2.02e-12!112;CL:0000049!2.02e-12!112;CL:0000738!6.57e-09!140;CL:0002595!3.11e-08!5;CL:0000723!3.74e-08!436;CL:0000034!4.92e-08!444;CL:0000048!2.35e-07!430 | |ontology_enrichment_celltype=CL:0000860!9.75e-26!45;CL:0002057!3.09e-23!42;CL:0000766!1.04e-22!76;CL:0000557!3.19e-19!71;CL:0000839!3.24e-18!70;CL:0002009!4.56e-18!65;CL:0002194!1.72e-17!63;CL:0000576!1.72e-17!63;CL:0000040!1.72e-17!63;CL:0000559!1.72e-17!63;CL:0000763!2.02e-12!112;CL:0000049!2.02e-12!112;CL:0000738!6.57e-09!140;CL:0002595!3.11e-08!5;CL:0000723!3.74e-08!436;CL:0000034!4.92e-08!444;CL:0000048!2.35e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-28;33!CL:0002057;1.22e-28;33!CL:0000473;1.41e-19;39!CL:0000234;1.41e-19;39!CL:0000576;1.59e-17;48!CL:0000766;1.38e-16;69!CL:0000771;9.17e-14;2!CL:0000094;2.82e-13;8!CL:0002393;6.86e-10;6!CL:0002397;6.86e-10;6!CL:0000763;6.95e-10;100!CL:0000775;7.15e-10;3!CL:0000081;1.08e-09;11!CL:0002087;6.32e-08;104!CL:0000569;3.03e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.49e-36,42;CL:0002057,1.49e-36,42;CL:0000766,2.70e-35,72;CL:0000473,1.39e-31,48;CL:0000234,1.39e-31,48;CL:0000557,1.78e-27,67;CL:0002009,6.11e-27,61;CL:0000839,9.03e-25,66;CL:0000763,1.18e-24,108;CL:0000049,1.18e-24,108;CL:0002194,1.27e-24,59;CL:0000576,1.27e-24,59;CL:0000040,1.27e-24,59;CL:0000559,1.27e-24,59;CL:0000738,1.00e-18,136;CL:0002032,3.70e-15,161;CL:0000837,3.70e-15,161;CL:0000037,2.38e-14,168;CL:0002031,7.67e-14,120;CL:0000771,8.60e-14,2;CL:0000988,2.11e-13,177;CL:0000094,2.91e-13,8;CL:0002087,3.52e-11,115;CL:0000775,7.81e-10,3;CL:0000081,1.10e-09,11;CL:0000048,1.39e-07,427;CL:0000723,2.11e-07,433;CL:0000569,3.03e-07,4;CL:0000011,3.03e-07,4;CL:0000034,3.60e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.75e-24;42!UBERON:0005754;3.67e-08;1!CL:0000011;3.03e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.96e-17!80;UBERON:0001474!3.52e-16!86;UBERON:0002193!1.57e-14!112;UBERON:0002390!2.14e-14!102;UBERON:0003061!2.14e-14!102;UBERON:0002405!9.24e-14!115;UBERON:0004765!5.12e-13!101;UBERON:0001434!5.12e-13!101;UBERON:0003081!1.05e-11!216;UBERON:0002204!1.52e-11!167;UBERON:0003834!3.11e-08!5;UBERON:0001533!3.11e-08!5;UBERON:0003513!9.72e-07!8;UBERON:0000467!9.93e-07!625 | |ontology_enrichment_uberon=UBERON:0002371!4.96e-17!80;UBERON:0001474!3.52e-16!86;UBERON:0002193!1.57e-14!112;UBERON:0002390!2.14e-14!102;UBERON:0003061!2.14e-14!102;UBERON:0002405!9.24e-14!115;UBERON:0004765!5.12e-13!101;UBERON:0001434!5.12e-13!101;UBERON:0003081!1.05e-11!216;UBERON:0002204!1.52e-11!167;UBERON:0003834!3.11e-08!5;UBERON:0001533!3.11e-08!5;UBERON:0003513!9.72e-07!8;UBERON:0000467!9.93e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.71e-10;3!UBERON:0004054;8.71e-10;3!UBERON:0000998;3.67e-08;1!UBERON:0006868;3.67e-08;1!UBERON:0001000;9.09e-08;1!UBERON:0005352;9.09e-08;1!UBERON:0005904;1.52e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.72e-24,76;UBERON:0001474,7.50e-22,82;UBERON:0002405,3.44e-21,93;UBERON:0004765,1.31e-19,90;UBERON:0002193,9.59e-18,108;UBERON:0002390,9.94e-18,98;UBERON:0003061,9.94e-18,98;UBERON:0001434,2.64e-17,100;UBERON:0003081,9.60e-14,203;UBERON:0002204,6.80e-13,167;UBERON:0006947,7.81e-10,3;UBERON:0004054,7.81e-10,3;UBERON:0000998,3.55e-08,1;UBERON:0006868,3.55e-08,1;UBERON:0000926,4.38e-08,315;UBERON:0004120,4.38e-08,315;UBERON:0006603,4.38e-08,315;UBERON:0001000,7.97e-08,1;UBERON:0005352,7.97e-08,1;UBERON:0005904,1.40e-07,4 | |||
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|short_description=p@chr1:186646037..186646054,- | |short_description=p@chr1:186646037..186646054,- | ||
}} | }} |
Latest revision as of 01:33, 28 July 2015
Short description: | p@chr1:186646037..186646054, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186646037..186646054, - |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.49e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.49e-36 | 42 |
myeloid leukocyte | 2.70e-35 | 72 |
defensive cell | 1.39e-31 | 48 |
phagocyte | 1.39e-31 | 48 |
granulocyte monocyte progenitor cell | 1.78e-27 | 67 |
macrophage dendritic cell progenitor | 6.11e-27 | 61 |
myeloid lineage restricted progenitor cell | 9.03e-25 | 66 |
myeloid cell | 1.18e-24 | 108 |
common myeloid progenitor | 1.18e-24 | 108 |
monopoietic cell | 1.27e-24 | 59 |
monocyte | 1.27e-24 | 59 |
monoblast | 1.27e-24 | 59 |
promonocyte | 1.27e-24 | 59 |
leukocyte | 1.00e-18 | 136 |
hematopoietic oligopotent progenitor cell | 3.70e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.70e-15 | 161 |
hematopoietic stem cell | 2.38e-14 | 168 |
hematopoietic lineage restricted progenitor cell | 7.67e-14 | 120 |
eosinophil | 8.60e-14 | 2 |
hematopoietic cell | 2.11e-13 | 177 |
granulocyte | 2.91e-13 | 8 |
nongranular leukocyte | 3.52e-11 | 115 |
neutrophil | 7.81e-10 | 3 |
blood cell | 1.10e-09 | 11 |
multi fate stem cell | 1.39e-07 | 427 |
somatic stem cell | 2.11e-07 | 433 |
cardiac mesenchymal cell | 3.03e-07 | 4 |
migratory trunk neural crest cell | 3.03e-07 | 4 |
stem cell | 3.60e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.72e-24 | 76 |
bone element | 7.50e-22 | 82 |
immune system | 3.44e-21 | 93 |
skeletal element | 1.31e-19 | 90 |
hemolymphoid system | 9.59e-18 | 108 |
hematopoietic system | 9.94e-18 | 98 |
blood island | 9.94e-18 | 98 |
skeletal system | 2.64e-17 | 100 |
lateral plate mesoderm | 9.60e-14 | 203 |
musculoskeletal system | 6.80e-13 | 167 |
male genital duct | 7.81e-10 | 3 |
internal male genitalia | 7.81e-10 | 3 |
seminal vesicle | 3.55e-08 | 1 |
seminal fluid secreting gland | 3.55e-08 | 1 |
mesoderm | 4.38e-08 | 315 |
mesoderm-derived structure | 4.38e-08 | 315 |
presumptive mesoderm | 4.38e-08 | 315 |
vas deferens | 7.97e-08 | 1 |
spermatic cord | 7.97e-08 | 1 |
duct of male reproductive system | 1.40e-07 | 4 |