FFCP PHASE1:Hg19::chr15:32976787..32976820,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6447 | |EntrezGene=6447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10816 | |HGNC=10816 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=146bp_to_ENST00000475752_5end | |association_with_transcript=146bp_to_ENST00000475752_5end | ||
|cluster_id=chr15:32976787..32976820,+ | |||
|coexpression_cluster_id=C3477 | |coexpression_cluster_id=C3477 | ||
|description=CAGE_peak_4_at_SCG5_5end | |description=CAGE_peak_4_at_SCG5_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.54e-26!180;CL:0000057!1.73e-17!75;CL:0002620!1.71e-12!23;CL:0000359!7.39e-12!32;CL:0000680!8.08e-12!57;CL:0000056!8.08e-12!57;CL:0000355!8.08e-12!57;CL:0000192!8.72e-11!42;CL:0000514!8.72e-11!42;CL:0000393!1.03e-10!60;CL:0000211!1.03e-10!60;CL:0000187!2.01e-10!54;CL:0000183!7.30e-10!59;CL:0002334!1.39e-08!12;CL:0002539!1.54e-08!10;CL:0000723!2.22e-07!436;CL:0000048!3.34e-07!430;CL:0000034!4.70e-07!444 | |ontology_enrichment_celltype=CL:0000055!1.54e-26!180;CL:0000057!1.73e-17!75;CL:0002620!1.71e-12!23;CL:0000359!7.39e-12!32;CL:0000680!8.08e-12!57;CL:0000056!8.08e-12!57;CL:0000355!8.08e-12!57;CL:0000192!8.72e-11!42;CL:0000514!8.72e-11!42;CL:0000393!1.03e-10!60;CL:0000211!1.03e-10!60;CL:0000187!2.01e-10!54;CL:0000183!7.30e-10!59;CL:0002334!1.39e-08!12;CL:0002539!1.54e-08!10;CL:0000723!2.22e-07!436;CL:0000048!3.34e-07!430;CL:0000034!4.70e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.53e-14;32!CL:0002539;5.21e-14;10!CL:0002620;6.80e-12;23!CL:0002570;1.89e-09;8!CL:0002334;2.18e-08;12!CL:0000569;1.68e-07;4!CL:0000192;2.08e-07;43!CL:0000048;2.11e-07;58!CL:0000723;2.41e-07;61 | |ontology_enrichment_celltype_v019=CL:0000359;3.53e-14;32!CL:0002539;5.21e-14;10!CL:0002620;6.80e-12;23!CL:0002570;1.89e-09;8!CL:0002334;2.18e-08;12!CL:0000569;1.68e-07;4!CL:0000192;2.08e-07;43!CL:0000048;2.11e-07;58!CL:0000723;2.41e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.64e-16,76;CL:0000359,5.29e-15,32;CL:0002539,4.39e-14,10;CL:0000048,5.14e-12,427;CL:0002620,7.41e-12,23;CL:0000723,1.67e-11,433;CL:0000034,7.63e-11,441;CL:0000192,1.05e-09,43;CL:0000514,1.05e-09,43;CL:0002570,1.46e-09,8;CL:0002334,1.73e-08,12;CL:0000680,3.65e-08,58;CL:0000056,3.65e-08,58;CL:0000355,3.65e-08,58;CL:0000569,1.57e-07,4;CL:0000011,1.57e-07,4;CL:0000187,3.32e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000011;1.68e-07;4!CL:0000514;2.08e-07;43 | |ontology_enrichment_development_v019=CL:0000011;1.68e-07;4!CL:0000514;2.08e-07;43 | ||
|ontology_enrichment_disease=DOID:2394!1.31e-10!14 | |ontology_enrichment_disease=DOID:2394!1.31e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.51e-13;14!DOID:17;3.58e-08;5!DOID:450;3.58e-08;5!DOID:66;3.58e-08;5!DOID:423;3.58e-08;5!DOID:0080000;3.58e-08;5!DOID:11722;3.58e-08;5!DOID:120;8.08e-07;27 | |ontology_enrichment_disease_v019=DOID:2394;1.51e-13;14!DOID:17;3.58e-08;5!DOID:450;3.58e-08;5!DOID:66;3.58e-08;5!DOID:423;3.58e-08;5!DOID:0080000;3.58e-08;5!DOID:11722;3.58e-08;5!DOID:120;8.08e-07;27 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.40e-13,14;DOID:17,3.04e-08,5;DOID:450,3.04e-08,5;DOID:66,3.04e-08,5;DOID:423,3.04e-08,5;DOID:0080000,3.04e-08,5;DOID:11722,3.04e-08,5;DOID:120,7.83e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.32e-14!83;UBERON:0002329!1.32e-14!83;UBERON:0003077!1.32e-14!83;UBERON:0003059!1.32e-14!83;UBERON:0007282!1.32e-14!83;UBERON:0009618!1.32e-14!83;UBERON:0007285!1.32e-14!83;UBERON:0004290!4.43e-12!70;UBERON:0000486!1.75e-11!82;UBERON:0001134!5.10e-11!61;UBERON:0002036!5.10e-11!61;UBERON:0003082!5.10e-11!61;UBERON:0002385!2.92e-10!63;UBERON:0001015!2.92e-10!63;UBERON:0000383!2.92e-10!63;UBERON:0001637!3.39e-10!42;UBERON:0003509!3.39e-10!42;UBERON:0004572!3.39e-10!42;UBERON:0002097!6.23e-10!40;UBERON:0004573!8.26e-10!33;UBERON:0004571!8.26e-10!33;UBERON:0002199!1.07e-09!45;UBERON:0002416!1.07e-09!45;UBERON:0000475!1.10e-09!365;UBERON:0004237!1.54e-08!10;UBERON:0004695!1.54e-08!10;UBERON:0002111!1.54e-08!10;UBERON:0004178!1.54e-08!10;UBERON:0005256!6.75e-08!143;UBERON:0001135!1.65e-07!15;UBERON:0001981!2.80e-07!60;UBERON:0007500!2.80e-07!60;UBERON:0004537!2.80e-07!60;UBERON:0006965!2.80e-07!60;UBERON:0004872!4.17e-07!84;UBERON:0000483!6.57e-07!309;UBERON:0000119!8.39e-07!312 | |ontology_enrichment_uberon=UBERON:0000914!1.32e-14!83;UBERON:0002329!1.32e-14!83;UBERON:0003077!1.32e-14!83;UBERON:0003059!1.32e-14!83;UBERON:0007282!1.32e-14!83;UBERON:0009618!1.32e-14!83;UBERON:0007285!1.32e-14!83;UBERON:0004290!4.43e-12!70;UBERON:0000486!1.75e-11!82;UBERON:0001134!5.10e-11!61;UBERON:0002036!5.10e-11!61;UBERON:0003082!5.10e-11!61;UBERON:0002385!2.92e-10!63;UBERON:0001015!2.92e-10!63;UBERON:0000383!2.92e-10!63;UBERON:0001637!3.39e-10!42;UBERON:0003509!3.39e-10!42;UBERON:0004572!3.39e-10!42;UBERON:0002097!6.23e-10!40;UBERON:0004573!8.26e-10!33;UBERON:0004571!8.26e-10!33;UBERON:0002199!1.07e-09!45;UBERON:0002416!1.07e-09!45;UBERON:0000475!1.10e-09!365;UBERON:0004237!1.54e-08!10;UBERON:0004695!1.54e-08!10;UBERON:0002111!1.54e-08!10;UBERON:0004178!1.54e-08!10;UBERON:0005256!6.75e-08!143;UBERON:0001135!1.65e-07!15;UBERON:0001981!2.80e-07!60;UBERON:0007500!2.80e-07!60;UBERON:0004537!2.80e-07!60;UBERON:0006965!2.80e-07!60;UBERON:0004872!4.17e-07!84;UBERON:0000483!6.57e-07!309;UBERON:0000119!8.39e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;5.21e-14;10!UBERON:0004695;5.21e-14;10!UBERON:0002111;5.21e-14;10!UBERON:0004178;5.21e-14;10!UBERON:0004573;3.39e-13;33!UBERON:0004571;3.39e-13;33!UBERON:0001637;5.62e-09;42!UBERON:0003509;5.62e-09;42!UBERON:0004572;5.62e-09;42!UBERON:0002118;5.84e-09;5!UBERON:0001135;1.51e-08;15!UBERON:0000947;2.96e-08;21!UBERON:0010191;2.96e-08;21!UBERON:0000992;1.47e-07;13 | |ontology_enrichment_uberon_v019=UBERON:0004237;5.21e-14;10!UBERON:0004695;5.21e-14;10!UBERON:0002111;5.21e-14;10!UBERON:0004178;5.21e-14;10!UBERON:0004573;3.39e-13;33!UBERON:0004571;3.39e-13;33!UBERON:0001637;5.62e-09;42!UBERON:0003509;5.62e-09;42!UBERON:0004572;5.62e-09;42!UBERON:0002118;5.84e-09;5!UBERON:0001135;1.51e-08;15!UBERON:0000947;2.96e-08;21!UBERON:0010191;2.96e-08;21!UBERON:0000992;1.47e-07;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.25e-14,33;UBERON:0004571,1.25e-14,33;UBERON:0001637,3.87e-14,42;UBERON:0003509,3.87e-14,42;UBERON:0004572,3.87e-14,42;UBERON:0004237,4.39e-14,10;UBERON:0004695,4.39e-14,10;UBERON:0002111,4.39e-14,10;UBERON:0004178,4.39e-14,10;UBERON:0004872,6.11e-10,83;UBERON:0007500,4.61e-09,59;UBERON:0001981,4.61e-09,59;UBERON:0004537,4.61e-09,59;UBERON:0006965,4.61e-09,59;UBERON:0002118,5.37e-09,5;UBERON:0001135,1.36e-08,15;UBERON:0000947,2.71e-08,21;UBERON:0010191,2.71e-08,21;UBERON:0002199,3.14e-08,46;UBERON:0002416,3.14e-08,46;UBERON:0001134,5.32e-08,62;UBERON:0002036,5.32e-08,62;UBERON:0003082,5.32e-08,62;UBERON:0002097,1.23e-07,41;UBERON:0002329,1.38e-07,71;UBERON:0003059,1.38e-07,71;UBERON:0007282,1.38e-07,71;UBERON:0004290,1.38e-07,71;UBERON:0009618,1.38e-07,71;UBERON:0000992,1.41e-07,13;UBERON:0002385,1.46e-07,64;UBERON:0001015,1.46e-07,64;UBERON:0000383,1.46e-07,64;UBERON:0003077,2.16e-07,72;UBERON:0007285,2.16e-07,72;UBERON:0007524,3.32e-07,73;UBERON:0000055,4.74e-07,68;UBERON:0002384,8.98e-07,371 | |||
|phase1_expression=3.27021082687002,1.2846031433459,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,53.786011716142,51.229034882038,51.8520164175035,41.4742878971931,0.369363174230364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,1.30361867064741,5.5670016293577,1.45990461090791,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,2.40597972162702,24.6281076312587,0.573673241497627,0.354668382198357,2.24271040056923,3.20246987189115,5.18001851676036,0,0.269421344139376,0.653847612453835,0,0,0,1.24864030732128,0,0.747243402759005,0.352303495931295,0.485618833104395,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,1.22595118319608,0.150238058906597,3.06266894532057,3.7671823494661,2.77624605464138,5.93409323246773,4.80145753735044,6.18315175430633,2.31876486041066,5.02515512095292,0.506328996723799,2.53336213419116,2.52433774244115,4.05019554026117,0.484938170456436,4.61512470271599,9.16844093871526,1.18692414617341,0.57978255948989,0.545492241181669,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0.329250856225877,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,4.68008530278475,1.93220510975347,2.81201501960331,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.387815147273333,0,11.834238535784,0,1.04007436911366,0,0,0,0.285955987316295,0,0,8.46914079163711,0,0,10.2489388200259,51.4204740574174,2.29937879718731,0,0,0,0,0,0,2.89562613335158,0.61642896765115,1.25342674267927,0,0,0,0,0.508189248444927,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,12.4053903909388,0.306923946576125,4.2099014164961,0.640695746278505,0.511707249066704,1.60853921143608,1.48418066444991,3.85524234506639,3.72879623157567,1.06765302817952,1.55776328755086,1.62694529843943,0,0.200506470303285,0,0,0,0,0,0,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0.096670718292122,0.154048617114644,0,1.24052915236078,0.214840489736547,0.290033387828457,0.681813019328807,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.2023155617111,113.422314028538,34.6293581513704,13.940745403212,0,1.59691809095107,14.7888608652762,4.07713282028624,2.43312307461385,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,3.92474320099615,0.899362287916574,0.274537029736055,0.235624804691373,0.808729926293264,1.58510321173008,1.68503382495592,0,1.21856744815642,1.05650146756755,0.545999645631943,0,0,0,1.99031692572366,1.31535265576129,0.578775534266688,0,1.42037263873893,0.92947049429925,0,0.143411352204052,0,4.280052617775,0,0.211107635297664,8.23237232399755,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.422008249231538,5.12020043105367,0,0,0,0,0.251932747854276,0.20453736500431,0.123084805461069,0.311039587661807,0.539210106883961,0,0,0,0,17.7819184231419,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,0,41.2470242166144,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0.61214552326098,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,4.38534158869603,9.14087213833753,0.189932387867636,0,20.3603403438896,0,0,0,0,0,0,0,0,0,0,2.95794831145333,46.8099955640461,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,11.5295962733569,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,5.18532894720761,1.30634944043764,2.39460383124975,0,29.3067397470925,0.566560457600628,0,0,0.517131825446202,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.09823638411767,0.3755727921195,0,0,0.124192805882767,0,0,0,0,0.470531639396343,0,0.434763085832475,6.71646612990933,24.5398975339586,3.32883516901568,0.568209015825267,2.0125432140206,1.77962244319307,14.8746044458,3.93200401784422,7.77186002913902,23.5089688483518,5.25679331640218,22.4901556081802,12.4210365501008,0.414706207840855,22.8623874519876,7.82617592717601,28.5489457094715,0.761610424337591,15.4610878617771,6.54655173129214,10.9558768183338,19.0253841550182,3.98095888698616,0,1.71697852591396,2.69399591012735,0,0,0.214441591374926,0.260994291965212,31.5121236462059,0,0.244736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| ||
|short_description=p4@SCG5 | |short_description=p4@SCG5 | ||
}} | }} |
Latest revision as of 04:23, 17 September 2015
Short description: | p4@SCG5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCG5_5end |
Coexpression cluster: | C3477_Smooth_Aortic_Mesothelial_cholangiocellular_glioma_pagetoid_mesothelioma |
Association with transcript: | 146bp_to_ENST00000475752_5end |
EntrezGene: | SCG5 |
HGNC: | 10816 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.64e-16 | 76 |
vascular associated smooth muscle cell | 5.29e-15 | 32 |
aortic smooth muscle cell | 4.39e-14 | 10 |
multi fate stem cell | 5.14e-12 | 427 |
skin fibroblast | 7.41e-12 | 23 |
somatic stem cell | 1.67e-11 | 433 |
stem cell | 7.63e-11 | 441 |
smooth muscle cell | 1.05e-09 | 43 |
smooth muscle myoblast | 1.05e-09 | 43 |
mesenchymal stem cell of adipose | 1.46e-09 | 8 |
preadipocyte | 1.73e-08 | 12 |
muscle precursor cell | 3.65e-08 | 58 |
myoblast | 3.65e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.65e-08 | 58 |
cardiac mesenchymal cell | 1.57e-07 | 4 |
migratory trunk neural crest cell | 1.57e-07 | 4 |
muscle cell | 3.32e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.40e-13 | 14 |
musculoskeletal system disease | 3.04e-08 | 5 |
myotonic disease | 3.04e-08 | 5 |
muscle tissue disease | 3.04e-08 | 5 |
myopathy | 3.04e-08 | 5 |
muscular disease | 3.04e-08 | 5 |
myotonic dystrophy | 3.04e-08 | 5 |
female reproductive organ cancer | 7.83e-07 | 27 |