FFCP PHASE1:Hg19::chr2:226378141..226378159,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:226378141..226378159,+ | |||
|description=CAGE_peak_at_chr2:226378141..226378159,+ | |description=CAGE_peak_at_chr2:226378141..226378159,+ | ||
|id=chr2:226378141..226378159,+ | |id=chr2:226378141..226378159,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.28e-16!254;CL:0002076!3.01e-08!43;CL:0000223!1.53e-07!59;CL:0002150!2.83e-07!3;CL:0000861!2.83e-07!3 | |ontology_enrichment_celltype=CL:0000066!9.28e-16!254;CL:0002076!3.01e-08!43;CL:0000223!1.53e-07!59;CL:0002150!2.83e-07!3;CL:0000861!2.83e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.63e-16,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.61e-22;29!UBERON:0006595;1.48e-10;86!UBERON:0001041;6.94e-07;30 | |||
|ontology_enrichment_disease=DOID:305!5.86e-19!106;DOID:0050687!1.94e-14!143;DOID:162!3.14e-12!235;DOID:14566!1.16e-11!239;DOID:299!4.96e-07!25 | |ontology_enrichment_disease=DOID:305!5.86e-19!106;DOID:0050687!1.94e-14!143;DOID:162!3.14e-12!235;DOID:14566!1.16e-11!239;DOID:299!4.96e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:305;3.50e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.59e-25,106;DOID:0050687,8.13e-19,143;DOID:162,1.53e-15,235;DOID:14566,4.53e-15,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.96e-19!9;UBERON:0008947!4.44e-13!38;UBERON:0003258!4.44e-13!38;UBERON:0000065!8.02e-13!53;UBERON:0004119!1.39e-11!169;UBERON:0000925!1.39e-11!169;UBERON:0006595!1.39e-11!169;UBERON:0001007!2.02e-10!155;UBERON:0001555!2.02e-10!155;UBERON:0007026!2.02e-10!155;UBERON:0004921!2.17e-10!129;UBERON:0004185!2.17e-10!129;UBERON:0000077!1.04e-09!130;UBERON:0001004!1.22e-09!72;UBERON:0001041!1.97e-08!98;UBERON:0001557!6.50e-08!19;UBERON:0002294!5.53e-07!7;UBERON:0001173!5.53e-07!7;UBERON:0004912!5.53e-07!7 | |ontology_enrichment_uberon=UBERON:0001737!2.96e-19!9;UBERON:0008947!4.44e-13!38;UBERON:0003258!4.44e-13!38;UBERON:0000065!8.02e-13!53;UBERON:0004119!1.39e-11!169;UBERON:0000925!1.39e-11!169;UBERON:0006595!1.39e-11!169;UBERON:0001007!2.02e-10!155;UBERON:0001555!2.02e-10!155;UBERON:0007026!2.02e-10!155;UBERON:0004921!2.17e-10!129;UBERON:0004185!2.17e-10!129;UBERON:0000077!1.04e-09!130;UBERON:0001004!1.22e-09!72;UBERON:0001041!1.97e-08!98;UBERON:0001557!6.50e-08!19;UBERON:0002294!5.53e-07!7;UBERON:0001173!5.53e-07!7;UBERON:0004912!5.53e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.77e-44;9!UBERON:0001557;1.77e-44;9!UBERON:0000065;6.14e-16;44!UBERON:0000072;3.58e-13;37!UBERON:0002394;4.14e-11;4!UBERON:0003928;4.14e-11;4!UBERON:0001004;9.09e-10;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.64e-44,9;UBERON:0001557,3.18e-20,19;UBERON:0008947,1.33e-16,38;UBERON:0003258,1.33e-16,38;UBERON:0000065,4.68e-15,54;UBERON:0001041,3.78e-14,87;UBERON:0004921,2.53e-13,118;UBERON:0004119,3.10e-13,160;UBERON:0000925,3.10e-13,160;UBERON:0006595,3.10e-13,160;UBERON:0001007,2.03e-12,145;UBERON:0001555,2.03e-12,145;UBERON:0007026,2.03e-12,145;UBERON:0001004,9.02e-12,74;UBERON:0000072,7.95e-11,47;UBERON:0002394,1.54e-07,6;UBERON:0003928,1.54e-07,6;UBERON:0001048,9.51e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.236132343941038,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5318376072516,23.6018566109342,17.5938051814942,21.9485005737464,20.916426632871,15.4225902422213,18.3370579097824,23.1541328847908,18.0831163764803,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991709492165869,3.65161127993702,3.82838137483752,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.20453736500431,0,0,11.0538071911212,1.43216939740487,0,0.197286811273867,0,0,0,0,0,2.3438498497671,0,0,3.52759689685049,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0.762569244632931,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,7.8372628344159,17.0298108810812,6.65135202130995,0,0,0,0,0,0.0633107959558787,0.586654148204409,0.320635281006135,0,16.9838168144811,0,0,0,0,0,0.235694034616795,0,0,23.5615882739903,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55911451938347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.513725443042,0,0,0,0,0,0,0,0,0,0.566560457600628,0,0,0.129282956361551,0.26446520348538,0.171086837884329,1.40963004463334,0.533937062838473,5.34494637338864,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,12.0154140521504,18.058752997259,0.244736704506468,0,1.54400723580486,0.438568099157414,0,0,0,0,0.345430341731199,10.331238510031,0,0.194860308839388,0.797189041880179,1.30852315404675,0,0.245772908753719,4.01493034381391,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.41023272848151,0.252071696221718,0,0,0,0.0981477185010256,2.47736419030255,0,0,0,0,0,0,0,0,0,0,1.03499260351932,0,0.781078098613847,0,0,0,0,0,0,9.19889479005086,0.535701835878287,0,0,0,0,0,1.20041606606193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0.730336388246517,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,3.13969215225718,0,0,0,0,0,0,0,32.6427107130008,0,1.9307228228694,0.988077223172456,0,0,0,0.665756774185513,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.236132343941038,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5318376072516,23.6018566109342,17.5938051814942,21.9485005737464,20.916426632871,15.4225902422213,18.3370579097824,23.1541328847908,18.0831163764803,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991709492165869,3.65161127993702,3.82838137483752,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.20453736500431,0,0,11.0538071911212,1.43216939740487,0,0.197286811273867,0,0,0,0,0,2.3438498497671,0,0,3.52759689685049,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0.762569244632931,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,7.8372628344159,17.0298108810812,6.65135202130995,0,0,0,0,0,0.0633107959558787,0.586654148204409,0.320635281006135,0,16.9838168144811,0,0,0,0,0,0.235694034616795,0,0,23.5615882739903,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55911451938347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.513725443042,0,0,0,0,0,0,0,0,0,0.566560457600628,0,0,0.129282956361551,0.26446520348538,0.171086837884329,1.40963004463334,0.533937062838473,5.34494637338864,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,12.0154140521504,18.058752997259,0.244736704506468,0,1.54400723580486,0.438568099157414,0,0,0,0,0.345430341731199,10.331238510031,0,0.194860308839388,0.797189041880179,1.30852315404675,0,0.245772908753719,4.01493034381391,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.41023272848151,0.252071696221718,0,0,0,0.0981477185010256,2.47736419030255,0,0,0,0,0,0,0,0,0,0,1.03499260351932,0,0.781078098613847,0,0,0,0,0,0,9.19889479005086,0.535701835878287,0,0,0,0,0,1.20041606606193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0.730336388246517,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,3.13969215225718,0,0,0,0,0,0,0,32.6427107130008,0,1.9307228228694,0.988077223172456,0,0,0,0.665756774185513,0,0 | ||
|short_description=p@chr2:226378141..226378159,+ | |short_description=p@chr2:226378141..226378159,+ | ||
}} | }} |
Latest revision as of 07:17, 29 July 2015
Short description: | p@chr2:226378141..226378159, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:226378141..226378159, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.63e-16 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.64e-44 | 9 |
upper respiratory tract | 3.18e-20 | 19 |
respiratory primordium | 1.33e-16 | 38 |
endoderm of foregut | 1.33e-16 | 38 |
respiratory tract | 4.68e-15 | 54 |
foregut | 3.78e-14 | 87 |
subdivision of digestive tract | 2.53e-13 | 118 |
endoderm-derived structure | 3.10e-13 | 160 |
endoderm | 3.10e-13 | 160 |
presumptive endoderm | 3.10e-13 | 160 |
digestive system | 2.03e-12 | 145 |
digestive tract | 2.03e-12 | 145 |
primitive gut | 2.03e-12 | 145 |
respiratory system | 9.02e-12 | 74 |
segment of respiratory tract | 7.95e-11 | 47 |
bile duct | 1.54e-07 | 6 |
digestive system duct | 1.54e-07 | 6 |
primordium | 9.51e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.59e-25 | 106 |
cell type cancer | 8.13e-19 | 143 |
cancer | 1.53e-15 | 235 |
disease of cellular proliferation | 4.53e-15 | 239 |