FFCP PHASE1:Hg19::chr3:112063962..112063972,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:112063962..112063972,+ | |||
|description=CAGE_peak_at_chr3:112063962..112063972,+ | |description=CAGE_peak_at_chr3:112063962..112063972,+ | ||
|id=chr3:112063962..112063972,+ | |id=chr3:112063962..112063972,+ | ||
|ontology_enrichment_celltype=CL:0002593;5.00e-16;2!CL:0002595;5.21e-14;5!CL:0002592;2.41e-11;3!CL:0000746;5.40e-11;3!CL:0000511;1.13e-08;1!CL:0002625;1.13e-08;1!CL:0000216;1.13e-08;1!CL:0002591;1.13e-08;1!CL:0000737;1.85e-08;4!CL:0000359;4.62e-08;32!CL:0002494;8.02e-08;16 | |ontology_enrichment_celltype=CL:0002494!1.76e-12!16;CL:0000540!2.22e-08!6;CL:0000031!2.22e-08!6;CL:0000404!2.22e-08!6;CL:0000047!8.31e-08!8;CL:0000393!9.75e-08!60;CL:0000211!9.75e-08!60 | ||
| | |ontology_enrichment_celltype_v019=CL:0002593;5.00e-16;2!CL:0002595;5.21e-14;5!CL:0002592;2.41e-11;3!CL:0000746;5.40e-11;3!CL:0000511;1.13e-08;1!CL:0002625;1.13e-08;1!CL:0000216;1.13e-08;1!CL:0002591;1.13e-08;1!CL:0000737;1.85e-08;4!CL:0000359;4.62e-08;32!CL:0002494;8.02e-08;16 | ||
|ontology_enrichment_celltype_v019_2=CL:0002593,7.88e-16,2;CL:0002595,4.57e-14,5;CL:0002592,2.67e-11,3;CL:0000746,5.41e-11,3;CL:0000513,5.41e-11,3;CL:0000511,7.75e-09,1;CL:0002625,7.75e-09,1;CL:0000216,7.75e-09,1;CL:0000393,1.36e-08,61;CL:0000211,1.36e-08,61;CL:0002591,1.65e-08,1;CL:0000737,1.85e-08,4;CL:0000359,5.83e-08,32;CL:0002494,8.32e-08,16;CL:0000187,1.24e-07,55;CL:0000680,3.50e-07,58;CL:0000056,3.50e-07,58;CL:0000355,3.50e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000513;5.40e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002456;5.00e-16;2!UBERON:0003834;5.21e-14;5!UBERON:0001533;5.21e-14;5!UBERON:0003498;2.41e-11;3!UBERON:0005985;2.41e-11;3!UBERON:0001621;2.41e-11;3!UBERON:0003513;3.71e-10;7!UBERON:0001136;1.13e-08;1!UBERON:0001343;1.13e-08;1!UBERON:0004910;1.13e-08;1!UBERON:0004813;1.13e-08;1!UBERON:0001869;6.38e-08;32!UBERON:0002791;1.92e-07;32!UBERON:0001893;2.93e-07;34!UBERON:0002021;8.91e-07;5 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.59e-15!194;UBERON:0002780!1.79e-14!41;UBERON:0001890!1.79e-14!41;UBERON:0006240!1.79e-14!41;UBERON:0003080!6.15e-14!42;UBERON:0001017!2.10e-13!82;UBERON:0005743!5.37e-13!86;UBERON:0001049!5.38e-13!57;UBERON:0005068!5.38e-13!57;UBERON:0006241!5.38e-13!57;UBERON:0007135!5.38e-13!57;UBERON:0001893!7.19e-13!34;UBERON:0001869!7.55e-13!32;UBERON:0002791!2.75e-12!33;UBERON:0000073!4.57e-12!94;UBERON:0001016!4.57e-12!94;UBERON:0004111!7.93e-12!241;UBERON:0002020!9.65e-12!34;UBERON:0003528!9.65e-12!34;UBERON:0000948!2.54e-11!24;UBERON:0005498!2.54e-11!24;UBERON:0004140!2.54e-11!24;UBERON:0009881!2.54e-11!24;UBERON:0004141!2.54e-11!24;UBERON:0003084!2.54e-11!24;UBERON:0007005!2.54e-11!24;UBERON:0004139!2.54e-11!24;UBERON:0004291!2.54e-11!24;UBERON:0002616!3.89e-11!59;UBERON:0004872!4.54e-11!84;UBERON:0007023!8.66e-11!115;UBERON:0002619!2.07e-10!22;UBERON:0003075!2.28e-10!86;UBERON:0007284!2.28e-10!86;UBERON:0001950!2.46e-10!20;UBERON:0000956!8.78e-10!25;UBERON:0000203!8.78e-10!25;UBERON:0000477!1.43e-09!286;UBERON:0007100!1.68e-09!27;UBERON:0002346!1.92e-09!90;UBERON:0000955!7.02e-09!69;UBERON:0006238!7.02e-09!69;UBERON:0003056!1.18e-08!61;UBERON:0000119!1.36e-08!312;UBERON:0004573!1.40e-08!33;UBERON:0004571!1.40e-08!33;UBERON:0000483!1.94e-08!309;UBERON:0001637!1.71e-07!42;UBERON:0003509!1.71e-07!42;UBERON:0004572!1.71e-07!42;UBERON:0003498!3.11e-07!5;UBERON:0005985!3.11e-07!5;UBERON:0004535!4.81e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;5.00e-16;2!UBERON:0003834;5.21e-14;5!UBERON:0001533;5.21e-14;5!UBERON:0003498;2.41e-11;3!UBERON:0005985;2.41e-11;3!UBERON:0001621;2.41e-11;3!UBERON:0003513;3.71e-10;7!UBERON:0001136;1.13e-08;1!UBERON:0001343;1.13e-08;1!UBERON:0004910;1.13e-08;1!UBERON:0004813;1.13e-08;1!UBERON:0001869;6.38e-08;32!UBERON:0002791;1.92e-07;32!UBERON:0001893;2.93e-07;34!UBERON:0002021;8.91e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,7.88e-16,2;UBERON:0003498,3.50e-14,5;UBERON:0005985,3.50e-14,5;UBERON:0003834,4.57e-14,5;UBERON:0001533,4.57e-14,5;UBERON:0001621,2.67e-11,3;UBERON:0003513,3.38e-10,7;UBERON:0001136,7.75e-09,1;UBERON:0001343,7.75e-09,1;UBERON:0004910,7.75e-09,1;UBERON:0005154,7.75e-09,1;UBERON:0005295,7.75e-09,1;UBERON:0004813,7.75e-09,1;UBERON:0005297,7.75e-09,1;UBERON:0005294,7.75e-09,1;UBERON:0010141,7.75e-09,1;UBERON:0005891,7.75e-09,1;UBERON:0002780,7.96e-08,41;UBERON:0001890,7.96e-08,41;UBERON:0003080,7.96e-08,41;UBERON:0006240,7.96e-08,41;UBERON:0000948,1.11e-07,24;UBERON:0005498,1.11e-07,24;UBERON:0004140,1.11e-07,24;UBERON:0009881,1.11e-07,24;UBERON:0004141,1.11e-07,24;UBERON:0003084,1.11e-07,24;UBERON:0007005,1.11e-07,24;UBERON:0004139,1.11e-07,24;UBERON:0004291,1.11e-07,24;UBERON:0002791,1.34e-07,32;UBERON:0001869,1.34e-07,32;UBERON:0003528,3.89e-07,34;UBERON:0002020,3.89e-07,34;UBERON:0001893,3.89e-07,34;UBERON:0007100,8.38e-07,27 | |||
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| ||
|short_description=p@chr3:112063962..112063972,+ | |short_description=p@chr3:112063962..112063972,+ | ||
}} | }} |
Latest revision as of 14:15, 29 July 2015
Short description: | p@chr3:112063962..112063972, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112063962..112063972, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 7.88e-16 | 2 |
smooth muscle cell of the subclavian artery | 4.57e-14 | 5 |
smooth muscle cell of the coronary artery | 2.67e-11 | 3 |
cardiac muscle cell | 5.41e-11 | 3 |
cardiac muscle myoblast | 5.41e-11 | 3 |
androgen binding protein secreting cell | 7.75e-09 | 1 |
seminiferous tubule epithelial cell | 7.75e-09 | 1 |
Sertoli cell | 7.75e-09 | 1 |
electrically responsive cell | 1.36e-08 | 61 |
electrically active cell | 1.36e-08 | 61 |
smooth muscle cell of the pulmonary artery | 1.65e-08 | 1 |
striated muscle cell | 1.85e-08 | 4 |
vascular associated smooth muscle cell | 5.83e-08 | 32 |
cardiocyte | 8.32e-08 | 16 |
muscle cell | 1.24e-07 | 55 |
muscle precursor cell | 3.50e-07 | 58 |
myoblast | 3.50e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.50e-07 | 58 |