FFCP PHASE2:Hg19::chr2:45168997..45169020,+
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Short description: | p4@SIX3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SIX3_5end |
Coexpression cluster: | C1905_caudate_putamen_embryonic_pituitary_globus_cord_rhabdomyosarcoma |
Association with transcript: | -16bp_to_NM_005413, uc002run.1_5end |
EntrezGene: | SIX3 |
HGNC: | 10889 |
UniProt: | O95343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@SIX3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.83e-11 | 4 |
vertebrate lens cell | 2.83e-11 | 4 |
lens epithelial cell | 2.83e-11 | 4 |
retinal pigment epithelial cell | 2.45e-09 | 3 |
ciliated cell | 3.53e-09 | 3 |
ciliated epithelial cell | 3.53e-09 | 3 |
multi-ciliated epithelial cell | 3.53e-09 | 3 |
non-pigmented ciliary epithelial cell | 3.53e-09 | 3 |
visual pigment cell | 4.35e-07 | 4 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
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pigment epithelium of eye | 1.48e-28 | 11 |
eye | 1.70e-26 | 21 |
visual system | 1.70e-26 | 21 |
pre-chordal neural plate | 2.06e-24 | 61 |
camera-type eye | 3.15e-24 | 20 |
simple eye | 3.15e-24 | 20 |
immature eye | 3.15e-24 | 20 |
ocular region | 3.15e-24 | 20 |
eyeball of camera-type eye | 3.15e-24 | 20 |
optic cup | 3.15e-24 | 20 |
Showing 1 to 10 of 78 entries
Ontology term | p-value | n |
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neuroectodermal tumor | 3.75e-16 | 10 |
neuroendocrine tumor | 1.78e-11 | 6 |
cell type cancer | 3.23e-09 | 143 |
Showing 1 to 3 of 3 entries