FFCP PHASE2:Mm9::chr2:66278810..66278903,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p2@Scn1a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Scn1a_5end |
| Coexpression cluster: | MCL_coexpression_mm9:20 |
| Association with transcript: | 0bp_to_ENSMUST00000112371, ENSMUST00000129508, ENSMUST00000138910, NM_018733, uc008jwz.1, uc008jxa.1_5end |
| EntrezGene: | Scn1a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@Scn1a |
|---|
0
25
50
75
100
125
150
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| raphe nuclei neuron | 1.05e-08 | 3 |
| CNS neuron (sensu Vertebrata) | 1.76e-08 | 23 |
| neuroblast (sensu Vertebrata) | 1.76e-08 | 23 |
| neuron of the substantia nigra | 3.06e-08 | 3 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 2.77e-34 | 54 |
| neural tube | 2.30e-30 | 52 |
| neural rod | 2.30e-30 | 52 |
| future spinal cord | 2.30e-30 | 52 |
| neural keel | 2.30e-30 | 52 |
| central nervous system | 1.31e-27 | 73 |
| neurectoderm | 2.54e-27 | 64 |
| neural plate | 2.54e-27 | 64 |
| presumptive neural plate | 2.54e-27 | 64 |
| nervous system | 1.10e-26 | 75 |
Showing 1 to 10 of 58 entries
