FFCP PHASE1:Hg19::chr3:69788576..69788648,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000557!1.57e-16!71;CL:0000839!5.92e-16!70;CL:0002194!7.42e-14!63;CL:0000576!7.42e-14!63;CL:0000040!7.42e-14!63;CL:0000559!7.42e-14!63;CL:0002009!2.06e-13!65;CL:0000766!9.53e-13!76;CL:0000763!2.25e-10!112;CL:0000049!2.25e-10!112;CL:0002057!4.09e-10!42;CL:0000860!2.35e-09!45 | |ontology_enrichment_celltype=CL:0000557!1.57e-16!71;CL:0000839!5.92e-16!70;CL:0002194!7.42e-14!63;CL:0000576!7.42e-14!63;CL:0000040!7.42e-14!63;CL:0000559!7.42e-14!63;CL:0002009!2.06e-13!65;CL:0000766!9.53e-13!76;CL:0000763!2.25e-10!112;CL:0000049!2.25e-10!112;CL:0002057!4.09e-10!42;CL:0000860!2.35e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.79e-12;39!CL:0000234;4.79e-12;39!CL:0000860;1.45e-10;33!CL:0002057;1.45e-10;33!CL:0000576;1.57e-07;48!CL:0000766;5.44e-07;69 | |ontology_enrichment_celltype_v019=CL:0000473;4.79e-12;39!CL:0000234;4.79e-12;39!CL:0000860;1.45e-10;33!CL:0002057;1.45e-10;33!CL:0000576;1.57e-07;48!CL:0000766;5.44e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.61e-17,67;CL:0000839,6.37e-17,66;CL:0002194,8.88e-15,59;CL:0000576,8.88e-15,59;CL:0000040,8.88e-15,59;CL:0000559,8.88e-15,59;CL:0002009,2.82e-14,61;CL:0000766,1.02e-13,72;CL:0000473,1.87e-13,48;CL:0000234,1.87e-13,48;CL:0000763,3.85e-11,108;CL:0000049,3.85e-11,108;CL:0000860,3.56e-10,42;CL:0002057,3.56e-10,42 | |||
|ontology_enrichment_development_v019=CL:0002057;6.50e-08;42 | |ontology_enrichment_development_v019=CL:0002057;6.50e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-31!115;UBERON:0000062!5.62e-21!511;UBERON:0002371!8.89e-15!80;UBERON:0001474!1.86e-13!86;UBERON:0000468!1.10e-12!659;UBERON:0004765!1.43e-12!101;UBERON:0001434!1.43e-12!101;UBERON:0000480!1.02e-11!626;UBERON:0000467!1.09e-11!625;UBERON:0002390!1.16e-11!102;UBERON:0003061!1.16e-11!102;UBERON:0002050!1.59e-11!605;UBERON:0005423!1.59e-11!605;UBERON:0000923!3.51e-11!604;UBERON:0005291!3.51e-11!604;UBERON:0006598!3.51e-11!604;UBERON:0002532!3.51e-11!604;UBERON:0000922!5.09e-11!612;UBERON:0002193!4.06e-10!112;UBERON:0001049!1.08e-09!57;UBERON:0005068!1.08e-09!57;UBERON:0006241!1.08e-09!57;UBERON:0007135!1.08e-09!57;UBERON:0002405!1.22e-08!115;UBERON:0000955!3.72e-08!69;UBERON:0006238!3.72e-08!69;UBERON:0003080!6.53e-08!42;UBERON:0002616!9.22e-08!59;UBERON:0001017!1.55e-07!82;UBERON:0002780!1.95e-07!41;UBERON:0001890!1.95e-07!41;UBERON:0006240!1.95e-07!41;UBERON:0005743!5.48e-07!86;UBERON:0002204!6.93e-07!167;UBERON:0003075!7.58e-07!86;UBERON:0007284!7.58e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!1.02e-31!115;UBERON:0000062!5.62e-21!511;UBERON:0002371!8.89e-15!80;UBERON:0001474!1.86e-13!86;UBERON:0000468!1.10e-12!659;UBERON:0004765!1.43e-12!101;UBERON:0001434!1.43e-12!101;UBERON:0000480!1.02e-11!626;UBERON:0000467!1.09e-11!625;UBERON:0002390!1.16e-11!102;UBERON:0003061!1.16e-11!102;UBERON:0002050!1.59e-11!605;UBERON:0005423!1.59e-11!605;UBERON:0000923!3.51e-11!604;UBERON:0005291!3.51e-11!604;UBERON:0006598!3.51e-11!604;UBERON:0002532!3.51e-11!604;UBERON:0000922!5.09e-11!612;UBERON:0002193!4.06e-10!112;UBERON:0001049!1.08e-09!57;UBERON:0005068!1.08e-09!57;UBERON:0006241!1.08e-09!57;UBERON:0007135!1.08e-09!57;UBERON:0002405!1.22e-08!115;UBERON:0000955!3.72e-08!69;UBERON:0006238!3.72e-08!69;UBERON:0003080!6.53e-08!42;UBERON:0002616!9.22e-08!59;UBERON:0001017!1.55e-07!82;UBERON:0002780!1.95e-07!41;UBERON:0001890!1.95e-07!41;UBERON:0006240!1.95e-07!41;UBERON:0005743!5.48e-07!86;UBERON:0002204!6.93e-07!167;UBERON:0003075!7.58e-07!86;UBERON:0007284!7.58e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.93e-08;114 | |ontology_enrichment_uberon_v019=UBERON:0007023;1.93e-08;114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.41e-31,114;UBERON:0002371,1.90e-15,76;UBERON:0001474,5.15e-14,82;UBERON:0004765,1.15e-12,90;UBERON:0001434,1.19e-12,100;UBERON:0002390,3.64e-12,98;UBERON:0003061,3.64e-12,98;UBERON:0002405,1.62e-11,93;UBERON:0002193,1.62e-10,108;UBERON:0000922,2.00e-09,592;UBERON:0005423,2.44e-09,581;UBERON:0001049,5.24e-09,56;UBERON:0005068,5.24e-09,56;UBERON:0006241,5.24e-09,56;UBERON:0007135,5.24e-09,56;UBERON:0002050,1.66e-08,564;UBERON:0000923,2.83e-08,560;UBERON:0010316,2.83e-08,560;UBERON:0005291,2.83e-08,560;UBERON:0006598,2.83e-08,560;UBERON:0010317,2.83e-08,560;UBERON:0002532,2.83e-08,560;UBERON:0000073,7.69e-08,53;UBERON:0002616,7.69e-08,53;UBERON:0000955,1.50e-07,68;UBERON:0006238,1.50e-07,68;UBERON:0002780,2.30e-07,41;UBERON:0001890,2.30e-07,41;UBERON:0003080,2.30e-07,41;UBERON:0006240,2.30e-07,41;UBERON:0001017,5.57e-07,81;UBERON:0002204,9.01e-07,167 | |||
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| ||
|short_description=p1@MITF | |short_description=p1@MITF | ||
}} | }} |
Revision as of 22:22, 15 November 2012
Short description: | p1@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MITF_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 0bp_to_ENST00000352241, ENST00000448226, ENST00000461511, ENST00000495741, NM_198159, uc003dnz.2_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | O75030 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.61e-17 | 67 |
myeloid lineage restricted progenitor cell | 6.37e-17 | 66 |
monopoietic cell | 8.88e-15 | 59 |
monocyte | 8.88e-15 | 59 |
monoblast | 8.88e-15 | 59 |
promonocyte | 8.88e-15 | 59 |
macrophage dendritic cell progenitor | 2.82e-14 | 61 |
myeloid leukocyte | 1.02e-13 | 72 |
defensive cell | 1.87e-13 | 48 |
phagocyte | 1.87e-13 | 48 |
myeloid cell | 3.85e-11 | 108 |
common myeloid progenitor | 3.85e-11 | 108 |
classical monocyte | 3.56e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.56e-10 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.41e-31 | 114 |
bone marrow | 1.90e-15 | 76 |
bone element | 5.15e-14 | 82 |
skeletal element | 1.15e-12 | 90 |
skeletal system | 1.19e-12 | 100 |
hematopoietic system | 3.64e-12 | 98 |
blood island | 3.64e-12 | 98 |
immune system | 1.62e-11 | 93 |
hemolymphoid system | 1.62e-10 | 108 |
embryo | 2.00e-09 | 592 |
developing anatomical structure | 2.44e-09 | 581 |
neural tube | 5.24e-09 | 56 |
neural rod | 5.24e-09 | 56 |
future spinal cord | 5.24e-09 | 56 |
neural keel | 5.24e-09 | 56 |
embryonic structure | 1.66e-08 | 564 |
germ layer | 2.83e-08 | 560 |
germ layer / neural crest | 2.83e-08 | 560 |
embryonic tissue | 2.83e-08 | 560 |
presumptive structure | 2.83e-08 | 560 |
germ layer / neural crest derived structure | 2.83e-08 | 560 |
epiblast (generic) | 2.83e-08 | 560 |
regional part of nervous system | 7.69e-08 | 53 |
regional part of brain | 7.69e-08 | 53 |
brain | 1.50e-07 | 68 |
future brain | 1.50e-07 | 68 |
regional part of forebrain | 2.30e-07 | 41 |
forebrain | 2.30e-07 | 41 |
anterior neural tube | 2.30e-07 | 41 |
future forebrain | 2.30e-07 | 41 |
central nervous system | 5.57e-07 | 81 |
musculoskeletal system | 9.01e-07 | 167 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.