FFCP PHASE1:Hg19::chr17:57297924..57297964,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=284161 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20883 | |||
|TSSclassifier=S | |||
|UniProt=Q8N9F7 | |||
|association_with_transcript=90bp_to_uc002ixj.2,uc002ixk.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GDPD1_5end | |||
|id=chr17:57297924..57297964,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.97e-07;7!CL:0000586;1.97e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.00e-07,7;CL:0000586,2.00e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.64e-12;82 | |||
|ontology_enrichment_disease=DOID:0050687!2.41e-08!143;DOID:305!1.09e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.50e-08;22!DOID:2994;7.50e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.17e-07,22;DOID:2994,1.17e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.37e-30!82;UBERON:0001049!1.76e-29!57;UBERON:0005068!1.76e-29!57;UBERON:0006241!1.76e-29!57;UBERON:0007135!1.76e-29!57;UBERON:0000073!2.62e-29!94;UBERON:0001016!2.62e-29!94;UBERON:0005743!3.32e-29!86;UBERON:0002616!6.75e-26!59;UBERON:0000955!1.74e-25!69;UBERON:0006238!1.74e-25!69;UBERON:0003080!2.22e-24!42;UBERON:0002780!5.84e-24!41;UBERON:0001890!5.84e-24!41;UBERON:0006240!5.84e-24!41;UBERON:0007023!8.09e-22!115;UBERON:0001893!5.44e-21!34;UBERON:0003075!8.07e-21!86;UBERON:0007284!8.07e-21!86;UBERON:0002020!8.77e-21!34;UBERON:0003528!8.77e-21!34;UBERON:0002791!2.89e-20!33;UBERON:0001869!8.60e-20!32;UBERON:0002346!1.77e-19!90;UBERON:0002619!1.12e-16!22;UBERON:0003056!2.25e-16!61;UBERON:0001950!1.84e-15!20;UBERON:0000956!3.31e-15!25;UBERON:0000203!3.31e-15!25;UBERON:0004121!8.82e-14!169;UBERON:0000153!1.18e-13!129;UBERON:0007811!1.18e-13!129;UBERON:0000924!3.32e-13!173;UBERON:0006601!3.32e-13!173;UBERON:0000033!5.46e-13!123;UBERON:0000025!1.04e-11!194;UBERON:0004111!5.77e-10!241;UBERON:0000477!2.20e-08!286;UBERON:0002420!3.44e-07!9;UBERON:0007245!3.44e-07!9;UBERON:0010009!3.44e-07!9;UBERON:0010011!3.44e-07!9;UBERON:0000454!3.44e-07!9;UBERON:0002308!4.65e-07!9;UBERON:0000125!4.65e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.20e-31;34!UBERON:0001869;1.75e-31;32!UBERON:0003528;2.50e-31;34!UBERON:0002020;2.50e-31;34!UBERON:0002791;3.30e-31;32!UBERON:0002619;5.86e-31;22!UBERON:0002780;4.13e-29;41!UBERON:0001890;4.13e-29;41!UBERON:0001950;1.53e-28;20!UBERON:0000073;1.29e-26;53!UBERON:0002616;1.29e-26;53!UBERON:0000956;2.27e-26;25!UBERON:0000203;2.27e-26;25!UBERON:0001017;2.97e-19;75!UBERON:0000955;8.41e-19;68!UBERON:0001016;3.72e-18;83!UBERON:0002420;3.47e-12;9!UBERON:0007245;3.47e-12;9!UBERON:0010009;3.47e-12;9!UBERON:0010011;3.47e-12;9!UBERON:0000454;3.47e-12;9!UBERON:0000125;6.17e-12;9!UBERON:0002308;6.17e-12;9!UBERON:0007023;1.41e-10;114!UBERON:0001871;6.69e-10;6!UBERON:0009663;7.97e-10;7!UBERON:0000200;1.25e-09;6!UBERON:0011216;6.92e-09;132!UBERON:0002021;1.96e-08;5!UBERON:0002298;3.56e-08;6!UBERON:0001872;4.85e-08;5!UBERON:0004733;8.54e-08;12!UBERON:0002028;8.54e-08;12!UBERON:0000349;1.07e-07;5!UBERON:0004732;4.96e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.08e-50,56;UBERON:0005068,1.08e-50,56;UBERON:0006241,1.08e-50,56;UBERON:0007135,1.08e-50,56;UBERON:0000073,3.24e-47,53;UBERON:0002616,3.24e-47,53;UBERON:0001016,6.65e-47,89;UBERON:0001017,9.32e-47,81;UBERON:0000955,1.49e-41,68;UBERON:0006238,1.49e-41,68;UBERON:0002780,1.04e-40,41;UBERON:0001890,1.04e-40,41;UBERON:0003080,1.04e-40,41;UBERON:0006240,1.04e-40,41;UBERON:0001893,1.29e-37,34;UBERON:0003528,3.20e-37,34;UBERON:0002020,3.20e-37,34;UBERON:0001869,2.80e-35,32;UBERON:0002791,6.11e-35,32;UBERON:0003075,4.98e-33,82;UBERON:0007284,4.98e-33,82;UBERON:0002619,5.73e-31,22;UBERON:0002346,1.15e-30,86;UBERON:0007023,1.05e-28,114;UBERON:0001950,1.36e-28,20;UBERON:0010371,5.71e-27,104;UBERON:0000956,2.22e-26,25;UBERON:0000203,2.22e-26,25;UBERON:0003056,9.02e-26,61;UBERON:0011216,5.79e-22,223;UBERON:0004121,1.20e-21,171;UBERON:0000924,1.20e-21,171;UBERON:0006601,1.20e-21,171;UBERON:0010314,7.19e-16,132;UBERON:0002420,1.67e-12,9;UBERON:0007245,1.67e-12,9;UBERON:0010009,1.67e-12,9;UBERON:0010011,1.67e-12,9;UBERON:0000454,1.67e-12,9;UBERON:0000025,2.84e-12,192;UBERON:0000125,2.99e-12,9;UBERON:0002308,2.99e-12,9;UBERON:0003076,4.92e-11,15;UBERON:0003057,4.92e-11,15;UBERON:0009663,4.66e-10,7;UBERON:0001871,5.63e-10,6;UBERON:0004111,6.61e-10,240;UBERON:0000200,1.26e-09,6;UBERON:0002021,2.20e-08,5;UBERON:0002298,2.72e-08,6;UBERON:0001872,4.77e-08,5;UBERON:0004733,5.61e-08,12;UBERON:0002028,5.61e-08,12;UBERON:0007277,5.61e-08,12;UBERON:0000349,9.74e-08,5;UBERON:0004732,3.39e-07,13 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,1.34465029290355,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0.125542639594803,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0.767658796194425,0.309632246632152,0,0.6024118375565,0.369754010166788,1.16200800870452,0.568676929949686,0.293600439334847,0,0,0,1.79132379391939,1.94336199611388,1.80302897343931,0.872389432677388,0,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,1.21079900526674,0,0,1.05627643155971,0.212604299965044,1.04829322754188,0.112328631146495,0.150176892841506,0.64290234678832,0.855038231223746,0.19891667719909,0.547992461293902,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0,6.60856642895129,3.92355994087075,6.05783394982677,0.196709770113833,0.393010762749165,0,0.167186495390678,0.651844533267181,0.473447805734733,0,0.334231370655521,0,0.886135578334485,0.270803863765016,0.25618263945135,0.130059347559878,0,0,0.289803085735052,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0,0.506039384039006,0,0.651083453856419,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0.263504357079378,1.5062593682237,0,0.370784442784429,0,0,0.398873881556595,0,0,0,0.79504962946682,2.58070378531837,0.347140501607594,1.13061588384802,0.419499436209906,0.550236083880135,0.208994966536811,1.29208379584664,0.35576626268671,1.67360306382335,0.402829317109147,0,0,0.367663080345869,0.81014194788176,0.892997282840798,1.12264686313085,0.337834441449967,1.53316637465883,0,0.732806975721629,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0.600182192168805,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0.193260853163297,1.09098448236334,0,0.609868530647977,1.59035721985782,0.929551542956147,0.621966330092223,0.504641701751257,1.45990943630332,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0,0,1.4763109092493,0,0,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0.860919069801795,0.171567810298526,0,0,0.201057944823262,0.277765335475589,0.325808305310325,0,0,0.34779121492523,0.234817388471643,0.721832238805369,0,0,0,0,0.984868024349589,0.234004265139238,0.743155811443641,0,0.16798212819886,0.567100388969546,0.0895585227028483,0,0,0,0,0,1.29707958075265,0.50496973370552,0.126995788584338,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0,0,0,0.560425719967636,0.197030760201927,0.431255149719035,0.128343036279748,1.01637849688985,1.30139853857622,0.773288812777695,2.17771144934653,1.91381625495949,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.256278298511402,0,0,0,0.154209693802656,0,0,0,0,0.241718899183244,0.601519410909855,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0.850468526382578,0,0,0,0,0,0,0,1.09629938322967,1.0457418040996,0,0,0.325378394664303,1.95777922130672,0.183138929636687,0.41254749960294,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0.638063562472921,0.10115778085555,0,0.31481234683064,0,0,0,0,0,1.28812398067792,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,0.811641507850816,0,0,0,0,0.35667105148125,0,0,0,0,0,0.192444225451024,0,0,1.22386941009813,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,2.88743956579008,0.245040215981032,0,0.577076851905779,0.355709216742071,0.159426272728822,0.199579371432817,0.191505370132367,0.211673582723883,0,0.561594356226918,0.228234679033192,0,0,0.338583555603207,0,0,0,0,0,0,0,0,1.11362469558097,3.69262196843137,2.16364542780786,0.66614393599564,0,1.49712432326576,0.293016358543788,0.242721043499027,0.334330152832435,0.568272293612826,0.47748896947538,0,0,7.95318118213038,2.95405774462077,2.11486539543521,0.329607748453519,4.64475897881586,0.19924798825107,0.828851746593443,1.76352923497993,0.818149460017238,0.123084805461069,0,0.0898683511473268,2.14825409610731,0,0.197286811273867,0,0,5.81599647657131,6.49376687132959,5.98841394003583,0,0.0874599999961957,1.44999915086959,0.1137934482855,2.03402920234213,0.236387681767936,0,0.291604613383254,0.520874984799877,8.85741385813839,1.92954301800653,3.05163472634166,1.87984741883082,3.54657142744257,3.29078095730959,1.85195387982283,0.278847488557207,0,0,0.922255617552241,5.74448924222542,1.3037684630641,1.27600463892768,2.01514705484097,0.53303477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| |||
|short_description=p2@GDPD1 | |||
}} |
Revision as of 14:50, 11 September 2013
Short description: | p2@GDPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GDPD1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 90bp_to_uc002ixj.2, uc002ixk.1_5end |
EntrezGene: | GDPD1 |
HGNC: | 20883 |
UniProt: | Q8N9F7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.00e-07 | 7 |
germ cell | 2.00e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.17e-07 | 22 |
germ cell cancer | 1.17e-07 | 22 |
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