FFCP PHASE1:Hg19::chr21:46340807..46340858,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3689|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6155|TSSclassifier=S|UniProt=A8MVG7,E5RIE4,E5RK54,E5RHE6|association_with_transcript=0bp_to_ENST00000397846,ENST00000518033,ENST00000520389,ENST00000521987,ENST00000522688,ENST00000524251_5end|coexpression_cluster_id=C26|description=CAGE_peak_1_at_ITGB2_5end|id=chr21:46340807..46340858,-|ontology_enrichment_celltype=CL:0000037!2.73e-74!172;CL:0000566!2.73e-74!172;CL:0002032!4.89e-70!165;CL:0000837!4.89e-70!165;CL:0000988!4.45e-69!182;CL:0000738!1.35e-67!140;CL:0002087!2.74e-58!119;CL:0002031!1.17e-56!124;CL:0000763!2.24e-46!112;CL:0000049!2.24e-46!112;CL:0000766!7.44e-41!76;CL:0002009!4.43e-36!65;CL:0000557!5.82e-36!71;CL:0002194!2.49e-35!63;CL:0000576!2.49e-35!63;CL:0000040!2.49e-35!63;CL:0000559!2.49e-35!63;CL:0000839!1.33e-34!70;CL:0002057!4.80e-31!42;CL:0000860!4.92e-28!45;CL:0000542!1.08e-19!53;CL:0000051!1.08e-19!53;CL:0000838!1.42e-19!52;CL:0000134!1.86e-11!358;CL:0000084!6.65e-11!25;CL:0000827!6.65e-11!25;CL:0000791!1.58e-10!18;CL:0000789!1.58e-10!18;CL:0002420!1.58e-10!18;CL:0002419!1.58e-10!18;CL:0000790!1.58e-10!18;CL:0002320!1.99e-10!365;CL:0000945!2.27e-08!24;CL:0000826!2.27e-08!24;CL:0000625!2.08e-07!11;CL:0000094!2.24e-07!8;CL:0002393!2.28e-07!9;CL:0002397!2.28e-07!9;CL:0000219!6.22e-07!390|ontology_enrichment_celltype_v019=CL:0000473;6.56e-25;39!CL:0000234;6.56e-25;39!CL:0000860;1.48e-24;33!CL:0002057;1.48e-24;33!CL:0000576;1.52e-23;48!CL:0000766;3.41e-19;69!CL:0002087;3.30e-17;104!CL:0000763;8.22e-16;100!CL:0000738;5.27e-15;136!CL:0000988;8.41e-13;177!CL:0000791;2.87e-11;18!CL:0000789;2.87e-11;18!CL:0002419;2.87e-11;18!CL:0000542;3.66e-11;53!CL:0000084;4.56e-11;25!CL:0000625;6.82e-08;11!CL:0000094;7.43e-08;8!CL:0000945;9.54e-08;24|ontology_enrichment_celltype_v019_2=CL:0000037,2.36e-79,168;CL:0002032,8.96e-75,161;CL:0000837,8.96e-75,161;CL:0000988,2.65e-74,177;CL:0000738,1.16e-72,136;CL:0002087,2.33e-64,115;CL:0002031,7.65e-61,120;CL:0000763,1.37e-51,108;CL:0000049,1.37e-51,108;CL:0000766,1.42e-46,72;CL:0002009,2.56e-43,61;CL:0002194,1.51e-42,59;CL:0000576,1.51e-42,59;CL:0000040,1.51e-42,59;CL:0000559,1.51e-42,59;CL:0000557,3.78e-41,67;CL:0000839,1.26e-39,66;CL:0000473,1.16e-38,48;CL:0000234,1.16e-38,48;CL:0000860,1.76e-33,42;CL:0002057,1.76e-33,42;CL:0000542,2.85e-19,53;CL:0000051,2.85e-19,53;CL:0000838,3.95e-19,52;CL:0000134,1.29e-11,354;CL:0000791,2.89e-11,18;CL:0000789,2.89e-11,18;CL:0002420,2.89e-11,18;CL:0002419,2.89e-11,18;CL:0000790,2.89e-11,18;CL:0000084,4.60e-11,25;CL:0000827,4.60e-11,25;CL:0002320,1.72e-10,361;CL:0000625,6.85e-08,11;CL:0000094,7.43e-08,8;CL:0002393,7.57e-08,9;CL:0002397,7.57e-08,9;CL:0000945,9.54e-08,24;CL:0000826,9.54e-08,24;CL:0000219,3.84e-07,386|ontology_enrichment_development_v019=CL:0002057;3.35e-24;42!CL:0000049;9.25e-15;108!CL:0000790;2.87e-11;18!CL:0000051;3.66e-11;53|ontology_enrichment_disease=DOID:1240!9.59e-09!39;DOID:2531!1.41e-08!51;DOID:0060083!1.41e-08!51;DOID:8692!6.70e-07!31|ontology_enrichment_disease_v019=DOID:1240;7.49e-07;39!DOID:8692;7.88e-07;31|ontology_enrichment_disease_v019_2=DOID:1240,1.22e-08,39;DOID:2531,1.51e-07,51;DOID:0060083,1.51e-07,51;DOID:8692,3.93e-07,31|ontology_enrichment_uberon=UBERON:0002390!2.48e-40!102;UBERON:0003061!2.48e-40!102;UBERON:0002193!4.47e-35!112;UBERON:0002371!7.37e-30!80;UBERON:0007023!7.17e-26!115;UBERON:0001474!2.19e-25!86;UBERON:0002405!5.27e-22!115;UBERON:0004765!1.44e-18!101;UBERON:0001434!1.44e-18!101;UBERON:0002384!2.07e-09!375;UBERON:0003081!8.25e-09!216;UBERON:0000178!1.74e-08!15;UBERON:0000179!1.74e-08!15;UBERON:0000463!1.74e-08!15;UBERON:0001049!4.58e-07!57;UBERON:0005068!4.58e-07!57;UBERON:0006241!4.58e-07!57;UBERON:0007135!4.58e-07!57|ontology_enrichment_uberon_v019=UBERON:0000178;4.67e-09;15!UBERON:0000179;4.67e-09;15!UBERON:0000463;4.67e-09;15!UBERON:0007023;1.02e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.52e-44,98;UBERON:0003061,1.52e-44,98;UBERON:0002193,3.58e-39,108;UBERON:0002371,9.20e-34,76;UBERON:0002405,6.27e-31,93;UBERON:0001474,5.14e-29,82;UBERON:0007023,1.20e-27,114;UBERON:0004765,8.84e-24,90;UBERON:0001434,9.12e-20,100;UBERON:0003081,5.69e-11,203;UBERON:0002384,2.07e-09,371;UBERON:0000178,4.67e-09,15;UBERON:0000179,4.67e-09,15;UBERON:0000463,4.67e-09,15;UBERON:0001049,1.58e-07,56;UBERON:0005068,1.58e-07,56;UBERON:0006241,1.58e-07,56;UBERON:0007135,1.58e-07,56;UBERON:0000073,7.16e-07,53;UBERON:0002616,7.16e-07,53|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,27.5653310045228,0,0,0,0,0,0,0,0,0,118.822845938064,99.2596126449844,110.273804620465,1064.05036887629,647.904023988095,1071.48238947056,0,0,0,8.05658886035137,32.8410927045944,105.40255772121,1189.98213752647,1254.0044300308,1151.45968001831,965.523524922554,831.43504067072,832.741810161325,1149.22767931368,875.91643747066,765.595297108748,1445.47618051645,928.828259041304,838.68485238394,1633.51740360517,1103.02800231431,840.457845024032,1571.69555847824,1070.85909006557,126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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3689 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6155 | |||
|TSSclassifier=S | |||
|UniProt=A8MVG7,E5RIE4,E5RK54,E5RHE6 | |||
|association_with_transcript=0bp_to_ENST00000397846,ENST00000518033,ENST00000520389,ENST00000521987,ENST00000522688,ENST00000524251_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_ITGB2_5end | |||
|id=chr21:46340807..46340858,- | |||
|ontology_enrichment_celltype=CL:0000037!2.73e-74!172;CL:0000566!2.73e-74!172;CL:0002032!4.89e-70!165;CL:0000837!4.89e-70!165;CL:0000988!4.45e-69!182;CL:0000738!1.35e-67!140;CL:0002087!2.74e-58!119;CL:0002031!1.17e-56!124;CL:0000763!2.24e-46!112;CL:0000049!2.24e-46!112;CL:0000766!7.44e-41!76;CL:0002009!4.43e-36!65;CL:0000557!5.82e-36!71;CL:0002194!2.49e-35!63;CL:0000576!2.49e-35!63;CL:0000040!2.49e-35!63;CL:0000559!2.49e-35!63;CL:0000839!1.33e-34!70;CL:0002057!4.80e-31!42;CL:0000860!4.92e-28!45;CL:0000542!1.08e-19!53;CL:0000051!1.08e-19!53;CL:0000838!1.42e-19!52;CL:0000134!1.86e-11!358;CL:0000084!6.65e-11!25;CL:0000827!6.65e-11!25;CL:0000791!1.58e-10!18;CL:0000789!1.58e-10!18;CL:0002420!1.58e-10!18;CL:0002419!1.58e-10!18;CL:0000790!1.58e-10!18;CL:0002320!1.99e-10!365;CL:0000945!2.27e-08!24;CL:0000826!2.27e-08!24;CL:0000625!2.08e-07!11;CL:0000094!2.24e-07!8;CL:0002393!2.28e-07!9;CL:0002397!2.28e-07!9;CL:0000219!6.22e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.56e-25;39!CL:0000234;6.56e-25;39!CL:0000860;1.48e-24;33!CL:0002057;1.48e-24;33!CL:0000576;1.52e-23;48!CL:0000766;3.41e-19;69!CL:0002087;3.30e-17;104!CL:0000763;8.22e-16;100!CL:0000738;5.27e-15;136!CL:0000988;8.41e-13;177!CL:0000791;2.87e-11;18!CL:0000789;2.87e-11;18!CL:0002419;2.87e-11;18!CL:0000542;3.66e-11;53!CL:0000084;4.56e-11;25!CL:0000625;6.82e-08;11!CL:0000094;7.43e-08;8!CL:0000945;9.54e-08;24 | |||
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|ontology_enrichment_development_v019=CL:0002057;3.35e-24;42!CL:0000049;9.25e-15;108!CL:0000790;2.87e-11;18!CL:0000051;3.66e-11;53 | |||
|ontology_enrichment_disease=DOID:1240!9.59e-09!39;DOID:2531!1.41e-08!51;DOID:0060083!1.41e-08!51;DOID:8692!6.70e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.49e-07;39!DOID:8692;7.88e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.22e-08,39;DOID:2531,1.51e-07,51;DOID:0060083,1.51e-07,51;DOID:8692,3.93e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.48e-40!102;UBERON:0003061!2.48e-40!102;UBERON:0002193!4.47e-35!112;UBERON:0002371!7.37e-30!80;UBERON:0007023!7.17e-26!115;UBERON:0001474!2.19e-25!86;UBERON:0002405!5.27e-22!115;UBERON:0004765!1.44e-18!101;UBERON:0001434!1.44e-18!101;UBERON:0002384!2.07e-09!375;UBERON:0003081!8.25e-09!216;UBERON:0000178!1.74e-08!15;UBERON:0000179!1.74e-08!15;UBERON:0000463!1.74e-08!15;UBERON:0001049!4.58e-07!57;UBERON:0005068!4.58e-07!57;UBERON:0006241!4.58e-07!57;UBERON:0007135!4.58e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.67e-09;15!UBERON:0000179;4.67e-09;15!UBERON:0000463;4.67e-09;15!UBERON:0007023;1.02e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.52e-44,98;UBERON:0003061,1.52e-44,98;UBERON:0002193,3.58e-39,108;UBERON:0002371,9.20e-34,76;UBERON:0002405,6.27e-31,93;UBERON:0001474,5.14e-29,82;UBERON:0007023,1.20e-27,114;UBERON:0004765,8.84e-24,90;UBERON:0001434,9.12e-20,100;UBERON:0003081,5.69e-11,203;UBERON:0002384,2.07e-09,371;UBERON:0000178,4.67e-09,15;UBERON:0000179,4.67e-09,15;UBERON:0000463,4.67e-09,15;UBERON:0001049,1.58e-07,56;UBERON:0005068,1.58e-07,56;UBERON:0006241,1.58e-07,56;UBERON:0007135,1.58e-07,56;UBERON:0000073,7.16e-07,53;UBERON:0002616,7.16e-07,53 | |||
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| |||
|short_description=p1@ITGB2 | |||
}} |
Revision as of 10:43, 12 September 2013
Short description: | p1@ITGB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ITGB2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000397846, ENST00000518033, ENST00000520389, ENST00000521987, ENST00000522688, ENST00000524251_5end |
EntrezGene: | ITGB2 |
HGNC: | 6155 |
UniProt: | A8MVG7E5RIE4E5RK54E5RHE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.52e-44 | 98 |
blood island | 1.52e-44 | 98 |
hemolymphoid system | 3.58e-39 | 108 |
bone marrow | 9.20e-34 | 76 |
immune system | 6.27e-31 | 93 |
bone element | 5.14e-29 | 82 |
adult organism | 1.20e-27 | 114 |
skeletal element | 8.84e-24 | 90 |
skeletal system | 9.12e-20 | 100 |
lateral plate mesoderm | 5.69e-11 | 203 |
connective tissue | 2.07e-09 | 371 |
blood | 4.67e-09 | 15 |
haemolymphatic fluid | 4.67e-09 | 15 |
organism substance | 4.67e-09 | 15 |
neural tube | 1.58e-07 | 56 |
neural rod | 1.58e-07 | 56 |
future spinal cord | 1.58e-07 | 56 |
neural keel | 1.58e-07 | 56 |
regional part of nervous system | 7.16e-07 | 53 |
regional part of brain | 7.16e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.22e-08 | 39 |
hematologic cancer | 1.51e-07 | 51 |
immune system cancer | 1.51e-07 | 51 |
myeloid leukemia | 3.93e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.