FFCP PHASE1:Mm9::chr15:71274493..71274497,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:71274493..71274497,-|id=chr15:71274493..71274497,-|ontology_enrichment_celltype=CL:0000117!4.79e-16!23;CL:0000337!4.79e-16!23;CL:0000540!7.57e-16!33;CL:0000047!7.57e-16!33;CL:0000031!7.57e-16!33;CL:0000404!7.57e-16!33;CL:0000393!1.59e-12!39;CL:0000211!1.59e-12!39;CL:0002319!7.72e-11!43;CL:0000221!1.82e-10!44;CL:0000133!1.82e-10!44;CL:0000055!1.45e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.44e-22,23;CL:0000337,1.44e-22,23;CL:0000540,3.30e-15,33;CL:0000047,3.30e-15,33;CL:0000031,3.30e-15,33;CL:0000404,3.30e-15,33;CL:0002612,6.22e-15,3;CL:0002614,1.30e-14,3;CL:0000393,1.34e-12,39;CL:0000211,1.34e-12,39;CL:0002319,2.91e-11,43;CL:0000221,5.76e-11,44;CL:0000133,5.76e-11,44;CL:0002610,2.62e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.77e-29!52;UBERON:0005068!2.77e-29!52;UBERON:0006241!2.77e-29!52;UBERON:0007135!2.77e-29!52;UBERON:0002020!2.18e-28!34;UBERON:0001017!2.01e-27!73;UBERON:0005743!2.01e-27!73;UBERON:0000073!2.15e-26!75;UBERON:0001016!2.15e-26!75;UBERON:0002616!1.87e-23!49;UBERON:0002346!6.61e-23!71;UBERON:0003075!6.61e-23!71;UBERON:0007284!6.61e-23!71;UBERON:0000955!8.25e-23!50;UBERON:0006238!8.25e-23!50;UBERON:0002791!4.56e-21!29;UBERON:0003528!4.56e-21!29;UBERON:0001893!4.56e-21!29;UBERON:0004121!8.37e-20!102;UBERON:0000924!8.37e-20!102;UBERON:0006601!8.37e-20!102;UBERON:0003080!1.05e-19!40;UBERON:0002780!8.53e-19!39;UBERON:0001890!8.53e-19!39;UBERON:0006240!8.53e-19!39;UBERON:0000033!1.31e-17!63;UBERON:0003056!3.96e-16!49;UBERON:0000956!1.20e-14!21;UBERON:0001869!1.20e-14!21;UBERON:0000203!1.20e-14!21;UBERON:0002021!5.97e-13!10;UBERON:0000411!5.97e-13!10;UBERON:0001950!5.97e-13!10;UBERON:0002619!4.87e-12!17;UBERON:0000025!2.94e-11!114;UBERON:0007811!1.31e-10!86;UBERON:0002240!2.47e-10!6;UBERON:0005174!2.47e-10!6;UBERON:0001137!2.47e-10!6;UBERON:0003076!3.55e-10!12;UBERON:0003057!3.55e-10!12;UBERON:0004111!7.17e-10!122;UBERON:0002298!7.69e-10!6;UBERON:0001948!4.34e-09!5;UBERON:0002315!4.34e-09!5;UBERON:0000153!5.19e-09!94;UBERON:0002420!1.31e-07!8;UBERON:0007245!1.31e-07!8;UBERON:0010009!1.31e-07!8;UBERON:0010011!1.31e-07!8;UBERON:0000454!1.31e-07!8;UBERON:0002950!2.62e-07!4;UBERON:0001891!2.62e-07!4;UBERON:0009616!2.62e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.66e-31,34;UBERON:0000073,2.74e-27,54;UBERON:0001049,3.86e-22,52;UBERON:0005068,3.86e-22,52;UBERON:0006241,3.86e-22,52;UBERON:0007135,3.86e-22,52;UBERON:0003528,4.52e-20,29;UBERON:0002791,4.52e-20,29;UBERON:0001893,4.52e-20,29;UBERON:0001017,1.73e-19,73;UBERON:0001016,6.79e-19,75;UBERON:0002346,1.68e-17,64;UBERON:0003075,1.68e-17,64;UBERON:0007284,1.68e-17,64;UBERON:0002021,2.61e-15,10;UBERON:0000411,2.61e-15,10;UBERON:0001950,2.61e-15,10;UBERON:0010371,5.11e-15,73;UBERON:0001948,5.14e-15,5;UBERON:0002315,5.14e-15,5;UBERON:0002257,6.22e-15,3;UBERON:0002038,1.30e-14,3;UBERON:0009663,1.30e-14,3;UBERON:0009661,1.30e-14,3;UBERON:0000125,1.30e-14,3;UBERON:0002308,1.30e-14,3;UBERON:0002780,1.92e-14,39;UBERON:0001890,1.92e-14,39;UBERON:0006240,1.92e-14,39;UBERON:0004121,2.48e-14,95;UBERON:0000924,2.48e-14,95;UBERON:0006601,2.48e-14,95;UBERON:0002616,4.43e-14,46;UBERON:0003080,4.93e-14,40;UBERON:0002420,7.62e-14,8;UBERON:0007245,7.62e-14,8;UBERON:0010009,7.62e-14,8;UBERON:0010011,7.62e-14,8;UBERON:0000454,7.62e-14,8;UBERON:0000955,9.77e-14,47;UBERON:0006238,9.77e-14,47;UBERON:0002240,1.53e-12,6;UBERON:0005174,1.53e-12,6;UBERON:0001137,1.53e-12,6;UBERON:0002619,5.50e-12,17;UBERON:0010314,2.33e-11,92;UBERON:0003056,4.20e-11,49;UBERON:0002950,4.34e-11,4;UBERON:0001891,4.34e-11,4;UBERON:0009616,4.34e-11,4;UBERON:0010286,4.34e-11,4;UBERON:0000956,1.46e-09,21;UBERON:0001869,1.46e-09,21;UBERON:0000203,1.46e-09,21;UBERON:0003076,2.89e-09,12;UBERON:0003057,2.89e-09,12;UBERON:0000025,1.24e-08,114;UBERON:0004111,6.97e-08,122;UBERON:0004684,2.62e-07,3;UBERON:0002275,2.62e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0,0.285650984403804,1.32521124570968,0,0.383381884072945,5.51531271966013,6.60695285996332,0,11.0596703944495,0.395658863190582,1.28082701043374,0,3.35019598801657,5.6276261003168,6.72312290217964,8.2496003932627,13.3829379951157,3.54158947068071,0,0,0,0,0,0.539703191637817,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,1.25668024088073,0,0,0,0,0.149790639404823,1.37250180845588,0,0.869121600961382,0.767146371990992,0.41557608911912,0.324482526135515,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2148 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:71274493..71274497,- | |||
|id=chr15:71274493..71274497,- | |||
|ontology_enrichment_celltype=CL:0000117!4.79e-16!23;CL:0000337!4.79e-16!23;CL:0000540!7.57e-16!33;CL:0000047!7.57e-16!33;CL:0000031!7.57e-16!33;CL:0000404!7.57e-16!33;CL:0000393!1.59e-12!39;CL:0000211!1.59e-12!39;CL:0002319!7.72e-11!43;CL:0000221!1.82e-10!44;CL:0000133!1.82e-10!44;CL:0000055!1.45e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.44e-22,23;CL:0000337,1.44e-22,23;CL:0000540,3.30e-15,33;CL:0000047,3.30e-15,33;CL:0000031,3.30e-15,33;CL:0000404,3.30e-15,33;CL:0002612,6.22e-15,3;CL:0002614,1.30e-14,3;CL:0000393,1.34e-12,39;CL:0000211,1.34e-12,39;CL:0002319,2.91e-11,43;CL:0000221,5.76e-11,44;CL:0000133,5.76e-11,44;CL:0002610,2.62e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.77e-29!52;UBERON:0005068!2.77e-29!52;UBERON:0006241!2.77e-29!52;UBERON:0007135!2.77e-29!52;UBERON:0002020!2.18e-28!34;UBERON:0001017!2.01e-27!73;UBERON:0005743!2.01e-27!73;UBERON:0000073!2.15e-26!75;UBERON:0001016!2.15e-26!75;UBERON:0002616!1.87e-23!49;UBERON:0002346!6.61e-23!71;UBERON:0003075!6.61e-23!71;UBERON:0007284!6.61e-23!71;UBERON:0000955!8.25e-23!50;UBERON:0006238!8.25e-23!50;UBERON:0002791!4.56e-21!29;UBERON:0003528!4.56e-21!29;UBERON:0001893!4.56e-21!29;UBERON:0004121!8.37e-20!102;UBERON:0000924!8.37e-20!102;UBERON:0006601!8.37e-20!102;UBERON:0003080!1.05e-19!40;UBERON:0002780!8.53e-19!39;UBERON:0001890!8.53e-19!39;UBERON:0006240!8.53e-19!39;UBERON:0000033!1.31e-17!63;UBERON:0003056!3.96e-16!49;UBERON:0000956!1.20e-14!21;UBERON:0001869!1.20e-14!21;UBERON:0000203!1.20e-14!21;UBERON:0002021!5.97e-13!10;UBERON:0000411!5.97e-13!10;UBERON:0001950!5.97e-13!10;UBERON:0002619!4.87e-12!17;UBERON:0000025!2.94e-11!114;UBERON:0007811!1.31e-10!86;UBERON:0002240!2.47e-10!6;UBERON:0005174!2.47e-10!6;UBERON:0001137!2.47e-10!6;UBERON:0003076!3.55e-10!12;UBERON:0003057!3.55e-10!12;UBERON:0004111!7.17e-10!122;UBERON:0002298!7.69e-10!6;UBERON:0001948!4.34e-09!5;UBERON:0002315!4.34e-09!5;UBERON:0000153!5.19e-09!94;UBERON:0002420!1.31e-07!8;UBERON:0007245!1.31e-07!8;UBERON:0010009!1.31e-07!8;UBERON:0010011!1.31e-07!8;UBERON:0000454!1.31e-07!8;UBERON:0002950!2.62e-07!4;UBERON:0001891!2.62e-07!4;UBERON:0009616!2.62e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.66e-31,34;UBERON:0000073,2.74e-27,54;UBERON:0001049,3.86e-22,52;UBERON:0005068,3.86e-22,52;UBERON:0006241,3.86e-22,52;UBERON:0007135,3.86e-22,52;UBERON:0003528,4.52e-20,29;UBERON:0002791,4.52e-20,29;UBERON:0001893,4.52e-20,29;UBERON:0001017,1.73e-19,73;UBERON:0001016,6.79e-19,75;UBERON:0002346,1.68e-17,64;UBERON:0003075,1.68e-17,64;UBERON:0007284,1.68e-17,64;UBERON:0002021,2.61e-15,10;UBERON:0000411,2.61e-15,10;UBERON:0001950,2.61e-15,10;UBERON:0010371,5.11e-15,73;UBERON:0001948,5.14e-15,5;UBERON:0002315,5.14e-15,5;UBERON:0002257,6.22e-15,3;UBERON:0002038,1.30e-14,3;UBERON:0009663,1.30e-14,3;UBERON:0009661,1.30e-14,3;UBERON:0000125,1.30e-14,3;UBERON:0002308,1.30e-14,3;UBERON:0002780,1.92e-14,39;UBERON:0001890,1.92e-14,39;UBERON:0006240,1.92e-14,39;UBERON:0004121,2.48e-14,95;UBERON:0000924,2.48e-14,95;UBERON:0006601,2.48e-14,95;UBERON:0002616,4.43e-14,46;UBERON:0003080,4.93e-14,40;UBERON:0002420,7.62e-14,8;UBERON:0007245,7.62e-14,8;UBERON:0010009,7.62e-14,8;UBERON:0010011,7.62e-14,8;UBERON:0000454,7.62e-14,8;UBERON:0000955,9.77e-14,47;UBERON:0006238,9.77e-14,47;UBERON:0002240,1.53e-12,6;UBERON:0005174,1.53e-12,6;UBERON:0001137,1.53e-12,6;UBERON:0002619,5.50e-12,17;UBERON:0010314,2.33e-11,92;UBERON:0003056,4.20e-11,49;UBERON:0002950,4.34e-11,4;UBERON:0001891,4.34e-11,4;UBERON:0009616,4.34e-11,4;UBERON:0010286,4.34e-11,4;UBERON:0000956,1.46e-09,21;UBERON:0001869,1.46e-09,21;UBERON:0000203,1.46e-09,21;UBERON:0003076,2.89e-09,12;UBERON:0003057,2.89e-09,12;UBERON:0000025,1.24e-08,114;UBERON:0004111,6.97e-08,122;UBERON:0004684,2.62e-07,3;UBERON:0002275,2.62e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0,0.285650984403804,1.32521124570968,0,0.383381884072945,5.51531271966013,6.60695285996332,0,11.0596703944495,0.395658863190582,1.28082701043374,0,3.35019598801657,5.6276261003168,6.72312290217964,8.2496003932627,13.3829379951157,3.54158947068071,0,0,0,0,0,0.539703191637817,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,1.25668024088073,0,0,0,0,0.149790639404823,1.37250180845588,0,0.869121600961382,0.767146371990992,0.41557608911912,0.324482526135515,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,2.13115428989678,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0.564751842617067,0,0.572895513439397,1.3748254587495,2.05524755931193,0.755393897389701,2.02506750069542,2.70192721934532,2.26571204492102,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:71274493..71274497,- | |||
}} |
Revision as of 10:47, 13 September 2013
Short description: | p@chr15:71274493..71274497, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:71274493..71274497, - |
Coexpression cluster: | MCL_coexpression_mm9:2148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.44e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.44e-22 | 23 |
neuron | 3.30e-15 | 33 |
neuronal stem cell | 3.30e-15 | 33 |
neuroblast | 3.30e-15 | 33 |
electrically signaling cell | 3.30e-15 | 33 |
neuron of the ventral spinal cord | 6.22e-15 | 3 |
neuron of the substantia nigra | 1.30e-14 | 3 |
electrically responsive cell | 1.34e-12 | 39 |
electrically active cell | 1.34e-12 | 39 |
neural cell | 2.91e-11 | 43 |
ectodermal cell | 5.76e-11 | 44 |
neurectodermal cell | 5.76e-11 | 44 |
raphe nuclei neuron | 2.62e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.