FFCP PHASE1:Hg19::chr4:93225627..93225641,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2895|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4576|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000505687_5end|coexpression_cluster_id=C11|description=CAGE_peak_4_at_GRID2_5end|id=chr4:93225627..93225641,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;5.60e-67;3!UBERON:0010122;2.45e-12;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.10e-86!57;UBERON:0005068!1.10e-86!57;UBERON:0006241!1.10e-86!57;UBERON:0007135!1.10e-86!57;UBERON:0001017!2.35e-74!82;UBERON:0005743!1.65e-70!86;UBERON:0002616!3.11e-70!59;UBERON:0000955!2.72e-65!69;UBERON:0006238!2.72e-65!69;UBERON:0000073!5.17e-63!94;UBERON:0001016!5.17e-63!94;UBERON:0002780!6.89e-56!41;UBERON:0001890!6.89e-56!41;UBERON:0006240!6.89e-56!41;UBERON:0003075!1.34e-54!86;UBERON:0007284!1.34e-54!86;UBERON:0003080!2.01e-54!42;UBERON:0002020!1.49e-53!34;UBERON:0003528!1.49e-53!34;UBERON:0002346!8.84e-52!90;UBERON:0001893!5.59e-49!34;UBERON:0001869!9.57e-48!32;UBERON:0002791!4.63e-46!33;UBERON:0001950!3.15e-40!20;UBERON:0002619!2.22e-36!22;UBERON:0003056!1.41e-35!61;UBERON:0000033!5.31e-35!123;UBERON:0004121!1.44e-34!169;UBERON:0007023!4.98e-34!115;UBERON:0000924!1.52e-33!173;UBERON:0006601!1.52e-33!173;UBERON:0003076!2.67e-33!15;UBERON:0003057!2.67e-33!15;UBERON:0000153!5.82e-33!129;UBERON:0007811!5.82e-33!129;UBERON:0000956!1.02e-31!25;UBERON:0000203!1.02e-31!25;UBERON:0002420!7.52e-25!9;UBERON:0007245!7.52e-25!9;UBERON:0010009!7.52e-25!9;UBERON:0010011!7.52e-25!9;UBERON:0000454!7.52e-25!9;UBERON:0002308!8.54e-25!9;UBERON:0000125!8.54e-25!9;UBERON:0004733!6.88e-24!12;UBERON:0002028!6.88e-24!12;UBERON:0007277!6.88e-24!12;UBERON:0004732!6.49e-22!13;UBERON:0000025!9.96e-22!194;UBERON:0002298!2.38e-21!8;UBERON:0001871!5.16e-21!7;UBERON:0009663!1.97e-18!7;UBERON:0000369!1.21e-15!4;UBERON:0002435!1.21e-15!4;UBERON:0000204!1.21e-15!4;UBERON:0010082!1.21e-15!4;UBERON:0004111!1.27e-15!241;UBERON:0000200!7.97e-15!6;UBERON:0002680!9.68e-15!9;UBERON:0001895!9.68e-15!9;UBERON:0010092!9.68e-15!9;UBERON:0000477!1.64e-12!286;UBERON:0001872!3.22e-12!5;UBERON:0005383!4.26e-12!3;UBERON:0005382!4.26e-12!3;UBERON:0001896!1.03e-11!3;UBERON:0005290!1.03e-11!3;UBERON:0010096!1.03e-11!3;UBERON:0002240!1.42e-11!3;UBERON:0000988!1.76e-11!3;UBERON:0002771!1.90e-11!3;UBERON:0006331!2.81e-11!3;UBERON:0000483!6.43e-11!309;UBERON:0000064!6.87e-11!219;UBERON:0000119!1.01e-10!312;UBERON:0000475!8.08e-10!365;UBERON:0001873!1.61e-08!2;UBERON:0010122!1.61e-08!2;UBERON:0001894!2.72e-08!7;UBERON:0006222!2.72e-08!7;UBERON:0001876!3.12e-08!2;UBERON:0001897!3.12e-08!2;UBERON:0002148!3.60e-08!2;UBERON:0009662!3.60e-08!2;UBERON:0000349!3.12e-07!5;UBERON:0005174!4.20e-07!5;UBERON:0001137!4.20e-07!5;UBERON:0002021!7.22e-07!5|ontology_enrichment_uberon_v019=UBERON:0002037;5.68e-34;6!UBERON:0005383;5.21e-30;3!UBERON:0005382;5.21e-30;3!UBERON:0001874;5.13e-23;1!UBERON:0002680;6.22e-23;9!UBERON:0001895;6.22e-23;9!UBERON:0000369;8.48e-23;4!UBERON:0002435;8.48e-23;4!UBERON:0000204;8.48e-23;4!UBERON:0002420;1.89e-22;9!UBERON:0007245;1.89e-22;9!UBERON:0010009;1.89e-22;9!UBERON:0010011;1.89e-22;9!UBERON:0000454;1.89e-22;9!UBERON:0004733;2.14e-17;12!UBERON:0002028;2.14e-17;12!UBERON:0004732;4.09e-16;13!UBERON:0000073;5.20e-16;53!UBERON:0002616;5.20e-16;53!UBERON:0003528;5.39e-16;34!UBERON:0002020;5.39e-16;34!UBERON:0002791;5.42e-16;32!UBERON:0001016;6.11e-16;83!UBERON:0000955;6.16e-16;68!UBERON:0001869;9.84e-15;32!UBERON:0001893;9.18e-14;34!UBERON:0009663;1.74e-13;7!UBERON:0001873;2.45e-12;2!UBERON:0001876;3.24e-12;2!UBERON:0001017;3.08e-11;75!UBERON:0000125;1.04e-10;9!UBERON:0002308;1.04e-10;9!UBERON:0001950;4.95e-10;20!UBERON:0002619;3.25e-09;22!UBERON:0002780;2.06e-08;41!UBERON:0001890;2.06e-08;41!UBERON:0000956;3.20e-08;25!UBERON:0000203;3.20e-08;25|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.01e-34,6;UBERON:0006215,6.01e-34,6;UBERON:0005383,5.61e-30,3;UBERON:0005382,5.61e-30,3;UBERON:0000073,8.10e-26,53;UBERON:0002616,8.10e-26,53;UBERON:0000955,3.29e-25,68;UBERON:0006238,3.29e-25,68;UBERON:0001049,1.86e-24,56;UBERON:0005068,1.86e-24,56;UBERON:0006241,1.86e-24,56;UBERON:0007135,1.86e-24,56;UBERON:0001874,6.40e-23,1;UBERON:0002680,6.45e-23,9;UBERON:0001895,6.45e-23,9;UBERON:0010092,6.45e-23,9;UBERON:0000369,8.96e-23,4;UBERON:0002435,8.96e-23,4;UBERON:0000204,8.96e-23,4;UBERON:0010082,8.96e-23,4;UBERON:0002420,1.82e-22,9;UBERON:0007245,1.82e-22,9;UBERON:0010009,1.82e-22,9;UBERON:0010011,1.82e-22,9;UBERON:0000454,1.82e-22,9;UBERON:0001017,3.01e-21,81;UBERON:0001016,3.70e-19,89;UBERON:0004733,2.20e-17,12;UBERON:0002028,2.20e-17,12;UBERON:0007277,2.20e-17,12;UBERON:0003075,9.09e-17,82;UBERON:0007284,9.09e-17,82;UBERON:0002791,1.00e-16,32;UBERON:0001869,1.00e-16,32;UBERON:0004732,4.20e-16,13;UBERON:0002346,5.44e-16,86;UBERON:0003528,8.73e-16,34;UBERON:0002020,8.73e-16,34;UBERON:0001893,8.73e-16,34;UBERON:0003076,4.72e-14,15;UBERON:0003057,4.72e-14,15;UBERON:0009663,1.80e-13,7;UBERON:0010371,3.21e-13,104;UBERON:0002780,3.41e-13,41;UBERON:0001890,3.41e-13,41;UBERON:0003080,3.41e-13,41;UBERON:0006240,3.41e-13,41;UBERON:0001873,2.32e-12,2;UBERON:0010122,2.32e-12,2;UBERON:0001876,2.90e-12,2;UBERON:0000125,1.07e-10,9;UBERON:0002308,1.07e-10,9;UBERON:0010314,2.18e-10,132;UBERON:0001950,4.88e-10,20;UBERON:0004121,5.05e-10,171;UBERON:0000924,5.05e-10,171;UBERON:0006601,5.05e-10,171;UBERON:0002619,3.21e-09,22;UBERON:0003056,5.43e-09,61;UBERON:0000956,3.16e-08,25;UBERON:0000203,3.16e-08,25;UBERON:0011216,1.33e-07,223;UBERON:0000025,4.65e-07,192;UBERON:0007023,5.98e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,3.99227596002388,0,0,0,0,0,0,0,0,0.173624994933292,2.65722415744152,0.361789315876224,6.10326945268333,5.63954225649246,3.25102380848902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.728994679896296,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.250381861413,0.573409195690071,0.332787154610557,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.963438376446893,0,0.159633859057151,0,1.26035848110859,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.405225507710368,0,0.620060389503552,0.507326481551255,2.18789923607288,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.40781839786099,0.328863867814245,0,0,0,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.271965960763659,0.872701380680755,0,0,0,0,0,0.109265571963696,0,0,0,0.36757959813938,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p4@GRID2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2895 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4576 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000505687_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_4_at_GRID2_5end | |||
|id=chr4:93225627..93225641,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.60e-67;3!UBERON:0010122;2.45e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@GRID2 | |||
}} |
Revision as of 12:21, 13 September 2013
Short description: | p4@GRID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GRID2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000505687_5end |
EntrezGene: | GRID2 |
HGNC: | 4576 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.