FFCP PHASE1:Mm9::chr17:27792478..27792489,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=23969|HGNC=|MCL_coexpression_id=1|UniProt=Q61644|association_with_transcript=24bp_to_ENSMUST00000114873_5end|description=CAGE_peak_4_at_Pacsin1_5end|id=chr17:27792478..27792489,+|ontology_enrichment_celltype=CL:0000117!7.90e-11!23;CL:0000337!7.90e-11!23;CL:0000540!6.65e-09!33;CL:0000047!6.65e-09!33;CL:0000031!6.65e-09!33;CL:0000404!6.65e-09!33|ontology_enrichment_celltype_v019_2=CL:0002610,9.53e-08,3;CL:0000117,1.07e-07,23;CL:0000337,1.07e-07,23;CL:0002614,4.16e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.68e-22!52;UBERON:0005068!5.68e-22!52;UBERON:0006241!5.68e-22!52;UBERON:0007135!5.68e-22!52;UBERON:0007811!6.81e-22!86;UBERON:0000033!8.63e-22!63;UBERON:0001017!1.20e-21!73;UBERON:0005743!1.20e-21!73;UBERON:0000073!2.81e-21!75;UBERON:0001016!2.81e-21!75;UBERON:0000955!7.26e-21!50;UBERON:0006238!7.26e-21!50;UBERON:0002616!4.69e-20!49;UBERON:0002346!2.85e-19!71;UBERON:0003075!2.85e-19!71;UBERON:0007284!2.85e-19!71;UBERON:0000153!5.63e-19!94;UBERON:0002020!2.61e-18!34;UBERON:0004121!7.28e-18!102;UBERON:0000924!7.28e-18!102;UBERON:0006601!7.28e-18!102;UBERON:0003080!1.31e-15!40;UBERON:0003056!2.92e-15!49;UBERON:0002780!8.48e-15!39;UBERON:0001890!8.48e-15!39;UBERON:0006240!8.48e-15!39;UBERON:0002791!8.50e-15!29;UBERON:0003528!8.50e-15!29;UBERON:0001893!8.50e-15!29;UBERON:0000956!4.23e-11!21;UBERON:0001869!4.23e-11!21;UBERON:0000203!4.23e-11!21;UBERON:0002021!5.09e-10!10;UBERON:0000411!5.09e-10!10;UBERON:0001950!5.09e-10!10;UBERON:0002619!3.49e-09!17;UBERON:0003076!4.10e-07!12;UBERON:0003057!4.10e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.65e-32,54;UBERON:0001049,7.21e-29,52;UBERON:0005068,7.21e-29,52;UBERON:0006241,7.21e-29,52;UBERON:0007135,7.21e-29,52;UBERON:0001017,7.38e-26,73;UBERON:0001016,5.68e-25,75;UBERON:0002346,5.77e-24,64;UBERON:0003075,5.77e-24,64;UBERON:0007284,5.77e-24,64;UBERON:0000955,2.88e-23,47;UBERON:0006238,2.88e-23,47;UBERON:0002020,3.88e-22,34;UBERON:0002616,9.64e-22,46;UBERON:0010371,9.84e-22,73;UBERON:0004121,6.20e-21,95;UBERON:0000924,6.20e-21,95;UBERON:0006601,6.20e-21,95;UBERON:0002021,3.25e-18,10;UBERON:0000411,3.25e-18,10;UBERON:0001950,3.25e-18,10;UBERON:0003528,7.74e-17,29;UBERON:0002791,7.74e-17,29;UBERON:0001893,7.74e-17,29;UBERON:0003080,1.11e-16,40;UBERON:0010314,8.64e-16,92;UBERON:0002780,3.22e-15,39;UBERON:0001890,3.22e-15,39;UBERON:0006240,3.22e-15,39;UBERON:0002619,8.80e-15,17;UBERON:0003056,3.08e-14,49;UBERON:0003076,6.87e-14,12;UBERON:0003057,6.87e-14,12;UBERON:0000956,7.10e-14,21;UBERON:0001869,7.10e-14,21;UBERON:0000203,7.10e-14,21;UBERON:0000025,1.54e-09,114;UBERON:0004111,2.62e-09,122;UBERON:0002950,3.67e-09,4;UBERON:0001891,3.67e-09,4;UBERON:0009616,3.67e-09,4;UBERON:0010286,3.67e-09,4;UBERON:0002240,6.04e-09,6;UBERON:0005174,6.04e-09,6;UBERON:0001137,6.04e-09,6;UBERON:0004684,9.53e-08,3;UBERON:0002275,9.53e-08,3;UBERON:0002038,4.16e-07,3;UBERON:0009663,4.16e-07,3;UBERON:0009661,4.16e-07,3;UBERON:0000125,4.16e-07,3;UBERON:0002308,4.16e-07,3;UBERON:0011216,5.62e-07,194;UBERON:0001948,6.83e-07,5;UBERON:0002315,6.83e-07,5|phase1_expression=0.480446541314382,0,0,0,0,0,0,1.03298658753261,0,0.234064526321993,0.513653904676515,0.478632953972018,1.71200729931206,1.04904482902797,0,0,0,0.315462165358238,0.548457734422955,0.42438965179803,1.27564935226605,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.90144856804538,2.68875039313971,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,3.14216082844184,2.87129103237098,0.979926393719632,0.191690942036473,0,2.20231761998777,5.10749352340751,5.68344173048101,0.263772575460388,0.548925861614458,0,4.18774498502071,1.68828783009504,3.20876320331301,2.06240009831567,2.13557521198654,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.26759077799012,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,3.51336956413857,3.56059401582874,0,0,0,0,4.79330046095433,1.37250180845588,0.753926112677186,5.04090528557602,6.64860189058859,6.44142938134636,4.2182728397617,0,0.124406970610093,0.252722758433675,0.631325567659422,0,0,0.180062129805349,0,0,0.2562274405697,0.187403449119458,1.55222022443409,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25724871410318,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,4.97706828962155,7.3843362553088,0,0,0.315508219416257,0,0,0,0,0.566153061577665,0,0.292255857911312,0,3.21321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,5.37733375830478,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926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| ||
|EntrezGene=23969 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q61644 | |||
|association_with_transcript=24bp_to_ENSMUST00000114873_5end | |||
|description=CAGE_peak_4_at_Pacsin1_5end | |||
|id=chr17:27792478..27792489,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.90e-11!23;CL:0000337!7.90e-11!23;CL:0000540!6.65e-09!33;CL:0000047!6.65e-09!33;CL:0000031!6.65e-09!33;CL:0000404!6.65e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,9.53e-08,3;CL:0000117,1.07e-07,23;CL:0000337,1.07e-07,23;CL:0002614,4.16e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.68e-22!52;UBERON:0005068!5.68e-22!52;UBERON:0006241!5.68e-22!52;UBERON:0007135!5.68e-22!52;UBERON:0007811!6.81e-22!86;UBERON:0000033!8.63e-22!63;UBERON:0001017!1.20e-21!73;UBERON:0005743!1.20e-21!73;UBERON:0000073!2.81e-21!75;UBERON:0001016!2.81e-21!75;UBERON:0000955!7.26e-21!50;UBERON:0006238!7.26e-21!50;UBERON:0002616!4.69e-20!49;UBERON:0002346!2.85e-19!71;UBERON:0003075!2.85e-19!71;UBERON:0007284!2.85e-19!71;UBERON:0000153!5.63e-19!94;UBERON:0002020!2.61e-18!34;UBERON:0004121!7.28e-18!102;UBERON:0000924!7.28e-18!102;UBERON:0006601!7.28e-18!102;UBERON:0003080!1.31e-15!40;UBERON:0003056!2.92e-15!49;UBERON:0002780!8.48e-15!39;UBERON:0001890!8.48e-15!39;UBERON:0006240!8.48e-15!39;UBERON:0002791!8.50e-15!29;UBERON:0003528!8.50e-15!29;UBERON:0001893!8.50e-15!29;UBERON:0000956!4.23e-11!21;UBERON:0001869!4.23e-11!21;UBERON:0000203!4.23e-11!21;UBERON:0002021!5.09e-10!10;UBERON:0000411!5.09e-10!10;UBERON:0001950!5.09e-10!10;UBERON:0002619!3.49e-09!17;UBERON:0003076!4.10e-07!12;UBERON:0003057!4.10e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.65e-32,54;UBERON:0001049,7.21e-29,52;UBERON:0005068,7.21e-29,52;UBERON:0006241,7.21e-29,52;UBERON:0007135,7.21e-29,52;UBERON:0001017,7.38e-26,73;UBERON:0001016,5.68e-25,75;UBERON:0002346,5.77e-24,64;UBERON:0003075,5.77e-24,64;UBERON:0007284,5.77e-24,64;UBERON:0000955,2.88e-23,47;UBERON:0006238,2.88e-23,47;UBERON:0002020,3.88e-22,34;UBERON:0002616,9.64e-22,46;UBERON:0010371,9.84e-22,73;UBERON:0004121,6.20e-21,95;UBERON:0000924,6.20e-21,95;UBERON:0006601,6.20e-21,95;UBERON:0002021,3.25e-18,10;UBERON:0000411,3.25e-18,10;UBERON:0001950,3.25e-18,10;UBERON:0003528,7.74e-17,29;UBERON:0002791,7.74e-17,29;UBERON:0001893,7.74e-17,29;UBERON:0003080,1.11e-16,40;UBERON:0010314,8.64e-16,92;UBERON:0002780,3.22e-15,39;UBERON:0001890,3.22e-15,39;UBERON:0006240,3.22e-15,39;UBERON:0002619,8.80e-15,17;UBERON:0003056,3.08e-14,49;UBERON:0003076,6.87e-14,12;UBERON:0003057,6.87e-14,12;UBERON:0000956,7.10e-14,21;UBERON:0001869,7.10e-14,21;UBERON:0000203,7.10e-14,21;UBERON:0000025,1.54e-09,114;UBERON:0004111,2.62e-09,122;UBERON:0002950,3.67e-09,4;UBERON:0001891,3.67e-09,4;UBERON:0009616,3.67e-09,4;UBERON:0010286,3.67e-09,4;UBERON:0002240,6.04e-09,6;UBERON:0005174,6.04e-09,6;UBERON:0001137,6.04e-09,6;UBERON:0004684,9.53e-08,3;UBERON:0002275,9.53e-08,3;UBERON:0002038,4.16e-07,3;UBERON:0009663,4.16e-07,3;UBERON:0009661,4.16e-07,3;UBERON:0000125,4.16e-07,3;UBERON:0002308,4.16e-07,3;UBERON:0011216,5.62e-07,194;UBERON:0001948,6.83e-07,5;UBERON:0002315,6.83e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,1.03298658753261,0,0.234064526321993,0.513653904676515,0.478632953972018,1.71200729931206,1.04904482902797,0,0,0,0.315462165358238,0.548457734422955,0.42438965179803,1.27564935226605,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.90144856804538,2.68875039313971,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,3.14216082844184,2.87129103237098,0.979926393719632,0.191690942036473,0,2.20231761998777,5.10749352340751,5.68344173048101,0.263772575460388,0.548925861614458,0,4.18774498502071,1.68828783009504,3.20876320331301,2.06240009831567,2.13557521198654,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.26759077799012,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,3.51336956413857,3.56059401582874,0,0,0,0,4.79330046095433,1.37250180845588,0.753926112677186,5.04090528557602,6.64860189058859,6.44142938134636,4.2182728397617,0,0.124406970610093,0.252722758433675,0.631325567659422,0,0,0.180062129805349,0,0,0.2562274405697,0.187403449119458,1.55222022443409,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25724871410318,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,4.97706828962155,7.3843362553088,0,0,0.315508219416257,0,0,0,0,0.566153061577665,0,0.292255857911312,0,3.21321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,5.37733375830478,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0.360586348559907,0.295379054349154,0.201932899896295,0.0762068066549998,0.302478555410522,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,5.52390283808612,0.572895513439397,7.38968684077857,3.42541259885321,3.0215755895588,4.05013500139084,4.95353323546643,4.98456649882625,7.7664046762773,0.103787347584177,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0,0,0,0,0.377252682772152,0.187283014939765,0.256100609619477,0,0.476293691283074,0,0.38581844092741,0.412085900803307,0.294397840268795,0,0.354951612318675,0,0.436039249896986,0.0941093804153306,0.0846146078916765,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.474540072496697,0.0985044823755635,0,0.464810523557898,0,0.499621155875892,0,0,0,0.441182838239031,0 | |||
|short_description=p4@Pacsin1 | |||
}} |
Revision as of 13:54, 13 September 2013
Short description: | p4@Pacsin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pacsin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 24bp_to_ENSMUST00000114873_5end |
EntrezGene: | Pacsin1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 9.53e-08 | 3 |
CNS neuron (sensu Vertebrata) | 1.07e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.07e-07 | 23 |
neuron of the substantia nigra | 4.16e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.