FFCP PHASE1:Hg19::chr5:89865232..89865235,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:89865232..89865235,+|id=chr5:89865232..89865235,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002605;1.54e-20;3!CL:0002319;6.50e-11;25!CL:0000243;1.83e-09;15!CL:0000125;1.83e-09;15!CL:0000128;4.36e-09;7!CL:0000126;4.36e-09;7!CL:0000127;4.36e-09;7!CL:0000095;1.94e-08;17!CL:0002553;2.04e-07;1!CL:0000062;9.08e-07;9|ontology_enrichment_celltype_v019_2=CL:0002605,1.88e-20,3;CL:0002319,7.20e-11,25;CL:0000243,1.95e-09,15;CL:0000125,1.95e-09,15;CL:0000030,1.95e-09,15;CL:0000339,1.95e-09,15;CL:0000128,4.73e-09,7;CL:0000126,4.73e-09,7;CL:0000127,4.73e-09,7;CL:0002453,4.73e-09,7;CL:0000095,2.05e-08,17;CL:0000123,2.05e-08,17;CL:0002553,1.80e-07,1|ontology_enrichment_development_v019=CL:0000339;1.83e-09;15|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!1.05e-34!86;UBERON:0002780!1.22e-34!41;UBERON:0001890!1.22e-34!41;UBERON:0006240!1.22e-34!41;UBERON:0001017!4.43e-34!82;UBERON:0000955!6.00e-34!69;UBERON:0006238!6.00e-34!69;UBERON:0003080!1.56e-33!42;UBERON:0000073!5.93e-31!94;UBERON:0001016!5.93e-31!94;UBERON:0001049!6.07e-31!57;UBERON:0005068!6.07e-31!57;UBERON:0006241!6.07e-31!57;UBERON:0007135!6.07e-31!57;UBERON:0001893!1.45e-30!34;UBERON:0002020!1.61e-30!34;UBERON:0003528!1.61e-30!34;UBERON:0003056!4.60e-30!61;UBERON:0002791!8.21e-30!33;UBERON:0002616!1.98e-29!59;UBERON:0001869!4.67e-29!32;UBERON:0002346!5.86e-26!90;UBERON:0003075!2.01e-25!86;UBERON:0007284!2.01e-25!86;UBERON:0000956!2.12e-24!25;UBERON:0000203!2.12e-24!25;UBERON:0002619!3.35e-20!22;UBERON:0001950!3.44e-20!20;UBERON:0000153!1.84e-19!129;UBERON:0007811!1.84e-19!129;UBERON:0000033!2.27e-19!123;UBERON:0007023!8.92e-17!115;UBERON:0000924!7.87e-16!173;UBERON:0006601!7.87e-16!173;UBERON:0004121!3.26e-15!169;UBERON:0001871!2.81e-11!7;UBERON:0002420!1.38e-08!9;UBERON:0007245!1.38e-08!9;UBERON:0010009!1.38e-08!9;UBERON:0010011!1.38e-08!9;UBERON:0000454!1.38e-08!9;UBERON:0000025!1.86e-08!194;UBERON:0000483!2.16e-08!309;UBERON:0000119!4.00e-08!312;UBERON:0000200!9.13e-08!6;UBERON:0002308!1.33e-07!9;UBERON:0000125!1.33e-07!9;UBERON:0000064!2.50e-07!219;UBERON:0003296!3.52e-07!4;UBERON:0010133!3.52e-07!4;UBERON:0000473!9.37e-07!8|ontology_enrichment_uberon_v019=UBERON:0003296;4.16e-25;4!UBERON:0010133;4.16e-25;4!UBERON:0002780;2.94e-15;41!UBERON:0001890;2.94e-15;41!UBERON:0000956;1.24e-14;25!UBERON:0000203;1.24e-14;25!UBERON:0001894;1.90e-14;7!UBERON:0001905;9.82e-14;2!UBERON:0002757;9.82e-14;2!UBERON:0010134;9.82e-14;2!UBERON:0005408;9.82e-14;2!UBERON:0001899;9.82e-14;2!UBERON:0000007;3.70e-13;2!UBERON:0000955;5.25e-12;68!UBERON:0002791;2.12e-11;32!UBERON:0001869;2.34e-11;32!UBERON:0000073;3.30e-11;53!UBERON:0002616;3.30e-11;53!UBERON:0003528;2.92e-10;34!UBERON:0002020;2.92e-10;34!UBERON:0001893;1.62e-09;34!UBERON:0001016;3.28e-09;83!UBERON:0001017;3.17e-08;75!UBERON:0002171;1.04e-07;1!UBERON:0006518;1.04e-07;1!UBERON:0008949;1.04e-07;1!UBERON:0000101;1.04e-07;1!UBERON:0002167;1.04e-07;1!UBERON:0001950;2.55e-07;20!UBERON:0002784;2.72e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.86e-25,4;UBERON:0010133,2.86e-25,4;UBERON:0001017,7.09e-21,81;UBERON:0000955,8.89e-20,68;UBERON:0006238,8.89e-20,68;UBERON:0002780,2.30e-19,41;UBERON:0001890,2.30e-19,41;UBERON:0003080,2.30e-19,41;UBERON:0006240,2.30e-19,41;UBERON:0001016,1.80e-18,89;UBERON:0000073,3.79e-17,53;UBERON:0002616,3.79e-17,53;UBERON:0001049,4.12e-16,56;UBERON:0005068,4.12e-16,56;UBERON:0006241,4.12e-16,56;UBERON:0007135,4.12e-16,56;UBERON:0003056,1.09e-14,61;UBERON:0001894,1.54e-14,7;UBERON:0006222,1.54e-14,7;UBERON:0000956,1.55e-14,25;UBERON:0000203,1.55e-14,25;UBERON:0001905,9.83e-14,2;UBERON:0002757,9.83e-14,2;UBERON:0010134,9.83e-14,2;UBERON:0005408,9.83e-14,2;UBERON:0001899,9.83e-14,2;UBERON:0000007,2.54e-13,2;UBERON:0003075,4.34e-12,82;UBERON:0007284,4.34e-12,82;UBERON:0002346,2.09e-11,86;UBERON:0002791,3.32e-11,32;UBERON:0001869,3.32e-11,32;UBERON:0011216,3.58e-11,223;UBERON:0003528,1.69e-10,34;UBERON:0002020,1.69e-10,34;UBERON:0001893,1.69e-10,34;UBERON:0010371,5.55e-09,104;UBERON:0004121,4.81e-08,171;UBERON:0000924,4.81e-08,171;UBERON:0006601,4.81e-08,171;UBERON:0002171,1.22e-07,1;UBERON:0006518,1.22e-07,1;UBERON:0008949,1.22e-07,1;UBERON:0000101,1.22e-07,1;UBERON:0002167,1.22e-07,1;UBERON:0002784,2.72e-07,4;UBERON:0001950,2.89e-07,20|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,10.304495536718,3.14811177667634,5.39833350257652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:89865232..89865235,+ | |||
|id=chr5:89865232..89865235,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.54e-20;3!CL:0002319;6.50e-11;25!CL:0000243;1.83e-09;15!CL:0000125;1.83e-09;15!CL:0000128;4.36e-09;7!CL:0000126;4.36e-09;7!CL:0000127;4.36e-09;7!CL:0000095;1.94e-08;17!CL:0002553;2.04e-07;1!CL:0000062;9.08e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.88e-20,3;CL:0002319,7.20e-11,25;CL:0000243,1.95e-09,15;CL:0000125,1.95e-09,15;CL:0000030,1.95e-09,15;CL:0000339,1.95e-09,15;CL:0000128,4.73e-09,7;CL:0000126,4.73e-09,7;CL:0000127,4.73e-09,7;CL:0002453,4.73e-09,7;CL:0000095,2.05e-08,17;CL:0000123,2.05e-08,17;CL:0002553,1.80e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000339;1.83e-09;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.05e-34!86;UBERON:0002780!1.22e-34!41;UBERON:0001890!1.22e-34!41;UBERON:0006240!1.22e-34!41;UBERON:0001017!4.43e-34!82;UBERON:0000955!6.00e-34!69;UBERON:0006238!6.00e-34!69;UBERON:0003080!1.56e-33!42;UBERON:0000073!5.93e-31!94;UBERON:0001016!5.93e-31!94;UBERON:0001049!6.07e-31!57;UBERON:0005068!6.07e-31!57;UBERON:0006241!6.07e-31!57;UBERON:0007135!6.07e-31!57;UBERON:0001893!1.45e-30!34;UBERON:0002020!1.61e-30!34;UBERON:0003528!1.61e-30!34;UBERON:0003056!4.60e-30!61;UBERON:0002791!8.21e-30!33;UBERON:0002616!1.98e-29!59;UBERON:0001869!4.67e-29!32;UBERON:0002346!5.86e-26!90;UBERON:0003075!2.01e-25!86;UBERON:0007284!2.01e-25!86;UBERON:0000956!2.12e-24!25;UBERON:0000203!2.12e-24!25;UBERON:0002619!3.35e-20!22;UBERON:0001950!3.44e-20!20;UBERON:0000153!1.84e-19!129;UBERON:0007811!1.84e-19!129;UBERON:0000033!2.27e-19!123;UBERON:0007023!8.92e-17!115;UBERON:0000924!7.87e-16!173;UBERON:0006601!7.87e-16!173;UBERON:0004121!3.26e-15!169;UBERON:0001871!2.81e-11!7;UBERON:0002420!1.38e-08!9;UBERON:0007245!1.38e-08!9;UBERON:0010009!1.38e-08!9;UBERON:0010011!1.38e-08!9;UBERON:0000454!1.38e-08!9;UBERON:0000025!1.86e-08!194;UBERON:0000483!2.16e-08!309;UBERON:0000119!4.00e-08!312;UBERON:0000200!9.13e-08!6;UBERON:0002308!1.33e-07!9;UBERON:0000125!1.33e-07!9;UBERON:0000064!2.50e-07!219;UBERON:0003296!3.52e-07!4;UBERON:0010133!3.52e-07!4;UBERON:0000473!9.37e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;4.16e-25;4!UBERON:0010133;4.16e-25;4!UBERON:0002780;2.94e-15;41!UBERON:0001890;2.94e-15;41!UBERON:0000956;1.24e-14;25!UBERON:0000203;1.24e-14;25!UBERON:0001894;1.90e-14;7!UBERON:0001905;9.82e-14;2!UBERON:0002757;9.82e-14;2!UBERON:0010134;9.82e-14;2!UBERON:0005408;9.82e-14;2!UBERON:0001899;9.82e-14;2!UBERON:0000007;3.70e-13;2!UBERON:0000955;5.25e-12;68!UBERON:0002791;2.12e-11;32!UBERON:0001869;2.34e-11;32!UBERON:0000073;3.30e-11;53!UBERON:0002616;3.30e-11;53!UBERON:0003528;2.92e-10;34!UBERON:0002020;2.92e-10;34!UBERON:0001893;1.62e-09;34!UBERON:0001016;3.28e-09;83!UBERON:0001017;3.17e-08;75!UBERON:0002171;1.04e-07;1!UBERON:0006518;1.04e-07;1!UBERON:0008949;1.04e-07;1!UBERON:0000101;1.04e-07;1!UBERON:0002167;1.04e-07;1!UBERON:0001950;2.55e-07;20!UBERON:0002784;2.72e-07;4 | |||
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|short_description=p@chr5:89865232..89865235,+ | |||
}} |
Revision as of 16:51, 13 September 2013
Short description: | p@chr5:89865232..89865235, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:89865232..89865235, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.88e-20 | 3 |
neural cell | 7.20e-11 | 25 |
glial cell (sensu Vertebrata) | 1.95e-09 | 15 |
glial cell | 1.95e-09 | 15 |
glioblast | 1.95e-09 | 15 |
glioblast (sensu Vertebrata) | 1.95e-09 | 15 |
oligodendrocyte | 4.73e-09 | 7 |
macroglial cell | 4.73e-09 | 7 |
astrocyte | 4.73e-09 | 7 |
oligodendrocyte precursor cell | 4.73e-09 | 7 |
neuron associated cell | 2.05e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 2.05e-08 | 17 |
lung fibroblast | 1.80e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.