FFCP PHASE1:Mm9::chr19:16207612..16207635,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14682|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-150bp_to_ENSMUST00000170229_5end|description=CAGE_peak_7_at_Gnaq_5end|id=chr19:16207612..16207635,+|ontology_enrichment_celltype=CL:0000540!2.96e-08!33;CL:0000047!2.96e-08!33;CL:0000031!2.96e-08!33;CL:0000404!2.96e-08!33;CL:0000117!7.60e-08!23;CL:0000337!7.60e-08!23;CL:0000393!3.37e-07!39;CL:0000211!3.37e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-10,23;CL:0000337,1.23e-10,23;CL:0000540,2.35e-07,33;CL:0000047,2.35e-07,33;CL:0000031,2.35e-07,33;CL:0000404,2.35e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.55e-19!71;UBERON:0003075!4.55e-19!71;UBERON:0007284!4.55e-19!71;UBERON:0000073!6.08e-19!75;UBERON:0001016!6.08e-19!75;UBERON:0001017!2.21e-18!73;UBERON:0005743!2.21e-18!73;UBERON:0004121!8.03e-18!102;UBERON:0000924!8.03e-18!102;UBERON:0006601!8.03e-18!102;UBERON:0001049!5.86e-17!52;UBERON:0005068!5.86e-17!52;UBERON:0006241!5.86e-17!52;UBERON:0007135!5.86e-17!52;UBERON:0000955!3.16e-16!50;UBERON:0006238!3.16e-16!50;UBERON:0000033!1.07e-15!63;UBERON:0002616!1.28e-15!49;UBERON:0002020!6.97e-15!34;UBERON:0003056!7.73e-15!49;UBERON:0003080!4.29e-13!40;UBERON:0002780!1.68e-12!39;UBERON:0001890!1.68e-12!39;UBERON:0006240!1.68e-12!39;UBERON:0002791!2.39e-12!29;UBERON:0003528!2.39e-12!29;UBERON:0001893!2.39e-12!29;UBERON:0000025!3.84e-08!114;UBERON:0000956!3.96e-08!21;UBERON:0001869!3.96e-08!21;UBERON:0000203!3.96e-08!21;UBERON:0002619!8.38e-08!17;UBERON:0002021!8.38e-08!10;UBERON:0000411!8.38e-08!10;UBERON:0001950!8.38e-08!10;UBERON:0004111!4.10e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.85e-35,54;UBERON:0001049,1.47e-32,52;UBERON:0005068,1.47e-32,52;UBERON:0006241,1.47e-32,52;UBERON:0007135,1.47e-32,52;UBERON:0002346,2.75e-29,64;UBERON:0003075,2.75e-29,64;UBERON:0007284,2.75e-29,64;UBERON:0001017,2.70e-28,73;UBERON:0001016,3.14e-27,75;UBERON:0002020,3.94e-27,34;UBERON:0000955,9.39e-27,47;UBERON:0006238,9.39e-27,47;UBERON:0002616,2.00e-25,46;UBERON:0010371,2.65e-24,73;UBERON:0003080,3.88e-22,40;UBERON:0004121,2.02e-21,95;UBERON:0000924,2.02e-21,95;UBERON:0006601,2.02e-21,95;UBERON:0003528,2.55e-21,29;UBERON:0002791,2.55e-21,29;UBERON:0001893,2.55e-21,29;UBERON:0002780,7.73e-21,39;UBERON:0001890,7.73e-21,39;UBERON:0006240,7.73e-21,39;UBERON:0003056,1.70e-19,49;UBERON:0010314,4.18e-18,92;UBERON:0002021,1.89e-16,10;UBERON:0000411,1.89e-16,10;UBERON:0001950,1.89e-16,10;UBERON:0002619,1.29e-14,17;UBERON:0000956,3.35e-13,21;UBERON:0001869,3.35e-13,21;UBERON:0000203,3.35e-13,21;UBERON:0000025,2.14e-12,114;UBERON:0004111,6.91e-11,122;UBERON:0003076,7.80e-11,12;UBERON:0003057,7.80e-11,12;UBERON:0002420,1.21e-09,8;UBERON:0007245,1.21e-09,8;UBERON:0010009,1.21e-09,8;UBERON:0010011,1.21e-09,8;UBERON:0000454,1.21e-09,8;UBERON:0002240,1.73e-08,6;UBERON:0005174,1.73e-08,6;UBERON:0001137,1.73e-08,6;UBERON:0002950,1.19e-07,4;UBERON:0001891,1.19e-07,4;UBERON:0009616,1.19e-07,4;UBERON:0010286,1.19e-07,4;UBERON:0001948,3.76e-07,5;UBERON:0002315,3.76e-07,5|phase1_expression=0.160148847104794,0,0,0.60492842261366,0.500895729946347,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,1.10556277196391,0.496454756004426,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0.251793635951155,0.608261587317087,0.183546752161682,0,0.218025156380447,1.31811709640683,0.58328969722285,0,0,0.335565212115473,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0.7104801149461,0.898800331555214,0,0.414758449233911,0.675029691658453,0.420649922702764,1.71390590642282,1.10434270475807,0.489963196859816,0.575072826109418,0,2.20231761998777,3.57524546638526,3.37934373163736,2.76961204233407,2.37867873366265,2.08365348222704,4.18774498502071,4.50210088025344,2.90316670775939,2.06240009831567,2.42031857358475,2.05039390407831,0.681535739998656,0.831287161174641,0.869593466105033,1.72084775396277,0,0,0,0,0.421333260395256,0.852151612890289,0.259786004602869,1.7666978725517,0.422530259330042,0,2.54805239706646,0,0,0,0,0.34255163915718,0,0.593768556259299,0.346970653532272,1.21786191324856,0,0.452167921657868,0.352766121407114,0.628332956648377,0.247194967734374,0,0,0.485300549842228,0,0,0,2.34224637609238,1.67557365450764,0.255457055208591,0.239630249011841,0,0.254140454146129,2.99581278809645,1.83000241127451,0.753926112677186,3.99795936442236,3.58001640262463,2.0778804455956,2.10913641988085,1.01839363850316,0.497627882440372,0.505445516867349,0.631325567659422,0.910843100738926,0.919608417733892,0.540186389416048,0.452114453507145,1.2246569847239,0.512454881139399,0.562210347358373,1.29351685369508,1.07783996466421,0.378212160335639,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522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| ||
|EntrezGene=14682 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=-150bp_to_ENSMUST00000170229_5end | |||
|description=CAGE_peak_7_at_Gnaq_5end | |||
|id=chr19:16207612..16207635,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.96e-08!33;CL:0000047!2.96e-08!33;CL:0000031!2.96e-08!33;CL:0000404!2.96e-08!33;CL:0000117!7.60e-08!23;CL:0000337!7.60e-08!23;CL:0000393!3.37e-07!39;CL:0000211!3.37e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-10,23;CL:0000337,1.23e-10,23;CL:0000540,2.35e-07,33;CL:0000047,2.35e-07,33;CL:0000031,2.35e-07,33;CL:0000404,2.35e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p7@Gnaq | |||
}} |
Revision as of 17:07, 13 September 2013
Short description: | p7@Gnaq |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gnaq_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -150bp_to_ENSMUST00000170229_5end |
EntrezGene: | Gnaq |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.23e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.23e-10 | 23 |
neuron | 2.35e-07 | 33 |
neuronal stem cell | 2.35e-07 | 33 |
neuroblast | 2.35e-07 | 33 |
electrically signaling cell | 2.35e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.