FFCP PHASE1:Mm9::chr2:163030164..163030178,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=269389|HGNC=|MCL_coexpression_id=20|UniProt=A2A474|association_with_transcript=-110bp_to_ENSMUST00000128999_5end|description=CAGE_peak_6_at_Tox2_5end|id=chr2:163030164..163030178,+|ontology_enrichment_celltype=CL:0000221!2.62e-14!44;CL:0000133!2.62e-14!44;CL:0002319!8.43e-14!43;CL:0000540!4.14e-13!33;CL:0000047!4.14e-13!33;CL:0000031!4.14e-13!33;CL:0000404!4.14e-13!33;CL:0000055!3.21e-10!50;CL:0000117!3.80e-10!23;CL:0000337!3.80e-10!23;CL:0000393!1.38e-09!39;CL:0000211!1.38e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,6.49e-13,23;CL:0000337,6.49e-13,23;CL:0000540,1.17e-09,33;CL:0000047,1.17e-09,33;CL:0000031,1.17e-09,33;CL:0000404,1.17e-09,33;CL:0002610,7.05e-09,3;CL:0002614,1.25e-08,3;CL:0000393,9.75e-08,39;CL:0000211,9.75e-08,39;CL:0002319,9.24e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.06e-36!102;UBERON:0000924!1.06e-36!102;UBERON:0006601!1.06e-36!102;UBERON:0002346!1.07e-34!71;UBERON:0003075!1.07e-34!71;UBERON:0007284!1.07e-34!71;UBERON:0000073!6.46e-34!75;UBERON:0001016!6.46e-34!75;UBERON:0001017!4.85e-33!73;UBERON:0005743!4.85e-33!73;UBERON:0000033!7.58e-29!63;UBERON:0001049!2.71e-25!52;UBERON:0005068!2.71e-25!52;UBERON:0006241!2.71e-25!52;UBERON:0007135!2.71e-25!52;UBERON:0003056!3.16e-25!49;UBERON:0000955!5.13e-25!50;UBERON:0006238!5.13e-25!50;UBERON:0002616!4.33e-24!49;UBERON:0003080!9.01e-20!40;UBERON:0002780!8.13e-19!39;UBERON:0001890!8.13e-19!39;UBERON:0006240!8.13e-19!39;UBERON:0002020!2.12e-18!34;UBERON:0007811!2.33e-16!86;UBERON:0002791!1.97e-15!29;UBERON:0003528!1.97e-15!29;UBERON:0001893!1.97e-15!29;UBERON:0000153!4.33e-14!94;UBERON:0000956!1.51e-10!21;UBERON:0001869!1.51e-10!21;UBERON:0000203!1.51e-10!21;UBERON:0002619!7.25e-10!17;UBERON:0002021!4.80e-09!10;UBERON:0000411!4.80e-09!10;UBERON:0001950!4.80e-09!10;UBERON:0004111!3.02e-07!122;UBERON:0002298!4.79e-07!6;UBERON:0000025!5.82e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.50e-32,54;UBERON:0001017,1.12e-31,73;UBERON:0001016,1.23e-30,75;UBERON:0002346,3.76e-29,64;UBERON:0003075,3.76e-29,64;UBERON:0007284,3.76e-29,64;UBERON:0001049,8.09e-28,52;UBERON:0005068,8.09e-28,52;UBERON:0006241,8.09e-28,52;UBERON:0007135,8.09e-28,52;UBERON:0004121,1.19e-27,95;UBERON:0000924,1.19e-27,95;UBERON:0006601,1.19e-27,95;UBERON:0000955,1.35e-26,47;UBERON:0006238,1.35e-26,47;UBERON:0002616,8.23e-25,46;UBERON:0010371,1.05e-24,73;UBERON:0003056,1.30e-24,49;UBERON:0003080,4.81e-24,40;UBERON:0002780,3.88e-22,39;UBERON:0001890,3.88e-22,39;UBERON:0006240,3.88e-22,39;UBERON:0002020,1.65e-20,34;UBERON:0003528,1.15e-19,29;UBERON:0002791,1.15e-19,29;UBERON:0001893,1.15e-19,29;UBERON:0010314,3.57e-18,92;UBERON:0002021,5.25e-17,10;UBERON:0000411,5.25e-17,10;UBERON:0001950,5.25e-17,10;UBERON:0002420,2.68e-14,8;UBERON:0007245,2.68e-14,8;UBERON:0010009,2.68e-14,8;UBERON:0010011,2.68e-14,8;UBERON:0000454,2.68e-14,8;UBERON:0002950,4.34e-11,4;UBERON:0001891,4.34e-11,4;UBERON:0009616,4.34e-11,4;UBERON:0010286,4.34e-11,4;UBERON:0002619,2.50e-09,17;UBERON:0000025,2.80e-09,114;UBERON:0000956,4.98e-09,21;UBERON:0001869,4.98e-09,21;UBERON:0000203,4.98e-09,21;UBERON:0004684,7.05e-09,3;UBERON:0002275,7.05e-09,3;UBERON:0002038,1.25e-08,3;UBERON:0009663,1.25e-08,3;UBERON:0009661,1.25e-08,3;UBERON:0000125,1.25e-08,3;UBERON:0002308,1.25e-08,3;UBERON:0004111,2.87e-08,122;UBERON:0000369,1.33e-07,5;UBERON:0002435,1.33e-07,5;UBERON:0000204,1.33e-07,5;UBERON:0010082,1.33e-07,5;UBERON:0011216,2.64e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,0,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0,0.210324961351382,1.71390590642282,0.441737081903227,0.244981598429908,0.0958454710182364,0,13.2139057199266,6.63974158042976,7.37311359629969,2.2420668914133,1.46380229763855,0,6.97957497503452,5.6276261003168,6.1119299110724,0.294628585473668,1.13897344639282,0.372798891650601,0.075726193333184,0.604572480854284,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0.461230994512117,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,8.23848516726525,2.74500361691176,1.38219787324151,2.08589184230732,1.02286182932132,7.48036960414416,2.75810147215188,0.101839363850316,0,0,0.841767423545896,0.260240885925407,0.229902104433473,0.360124259610698,0.452114453507145,1.36072998302656,0.384341160854549,1.12442069471675,1.29351685369508,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.841159794256509,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0,0.172684981865896,0,0,0,0,0,5.29816946959713,2.93029216480508,0,0,1.26203287766503,0.390438744296638,0.430846795465598,0.477937595905104,0.668396022247182,0,0.809621403349789,0.292255857911312,0.790575555893047,3.85585579706168,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,4.08527526904546,0.18006109403131,0.129358683782755,0.643011105094777,0,0,0.987294123612726,1.2178597964584,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,5.7481843623258,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0.469428954583016,0,0,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,1.12950368523413,2.30162618253588,1.14579102687879,1.03111909406213,0.685082519770642,1.5107877947794,2.70009000092722,3.15224842256954,3.62513927187364,2.07104124700728,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0.64183841918363,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0.365855945745545,0,0,1.12228454331548,0,0.0985044823755635,0,0,0,0.499621155875892,0.233931608445408,0,0.191288332068843,0.220591419119515,0|short_description=p6@Tox2}} | ||
|EntrezGene=269389 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=A2A474 | |||
|association_with_transcript=-110bp_to_ENSMUST00000128999_5end | |||
|description=CAGE_peak_6_at_Tox2_5end | |||
|id=chr2:163030164..163030178,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.62e-14!44;CL:0000133!2.62e-14!44;CL:0002319!8.43e-14!43;CL:0000540!4.14e-13!33;CL:0000047!4.14e-13!33;CL:0000031!4.14e-13!33;CL:0000404!4.14e-13!33;CL:0000055!3.21e-10!50;CL:0000117!3.80e-10!23;CL:0000337!3.80e-10!23;CL:0000393!1.38e-09!39;CL:0000211!1.38e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.49e-13,23;CL:0000337,6.49e-13,23;CL:0000540,1.17e-09,33;CL:0000047,1.17e-09,33;CL:0000031,1.17e-09,33;CL:0000404,1.17e-09,33;CL:0002610,7.05e-09,3;CL:0002614,1.25e-08,3;CL:0000393,9.75e-08,39;CL:0000211,9.75e-08,39;CL:0002319,9.24e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.06e-36!102;UBERON:0000924!1.06e-36!102;UBERON:0006601!1.06e-36!102;UBERON:0002346!1.07e-34!71;UBERON:0003075!1.07e-34!71;UBERON:0007284!1.07e-34!71;UBERON:0000073!6.46e-34!75;UBERON:0001016!6.46e-34!75;UBERON:0001017!4.85e-33!73;UBERON:0005743!4.85e-33!73;UBERON:0000033!7.58e-29!63;UBERON:0001049!2.71e-25!52;UBERON:0005068!2.71e-25!52;UBERON:0006241!2.71e-25!52;UBERON:0007135!2.71e-25!52;UBERON:0003056!3.16e-25!49;UBERON:0000955!5.13e-25!50;UBERON:0006238!5.13e-25!50;UBERON:0002616!4.33e-24!49;UBERON:0003080!9.01e-20!40;UBERON:0002780!8.13e-19!39;UBERON:0001890!8.13e-19!39;UBERON:0006240!8.13e-19!39;UBERON:0002020!2.12e-18!34;UBERON:0007811!2.33e-16!86;UBERON:0002791!1.97e-15!29;UBERON:0003528!1.97e-15!29;UBERON:0001893!1.97e-15!29;UBERON:0000153!4.33e-14!94;UBERON:0000956!1.51e-10!21;UBERON:0001869!1.51e-10!21;UBERON:0000203!1.51e-10!21;UBERON:0002619!7.25e-10!17;UBERON:0002021!4.80e-09!10;UBERON:0000411!4.80e-09!10;UBERON:0001950!4.80e-09!10;UBERON:0004111!3.02e-07!122;UBERON:0002298!4.79e-07!6;UBERON:0000025!5.82e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.50e-32,54;UBERON:0001017,1.12e-31,73;UBERON:0001016,1.23e-30,75;UBERON:0002346,3.76e-29,64;UBERON:0003075,3.76e-29,64;UBERON:0007284,3.76e-29,64;UBERON:0001049,8.09e-28,52;UBERON:0005068,8.09e-28,52;UBERON:0006241,8.09e-28,52;UBERON:0007135,8.09e-28,52;UBERON:0004121,1.19e-27,95;UBERON:0000924,1.19e-27,95;UBERON:0006601,1.19e-27,95;UBERON:0000955,1.35e-26,47;UBERON:0006238,1.35e-26,47;UBERON:0002616,8.23e-25,46;UBERON:0010371,1.05e-24,73;UBERON:0003056,1.30e-24,49;UBERON:0003080,4.81e-24,40;UBERON:0002780,3.88e-22,39;UBERON:0001890,3.88e-22,39;UBERON:0006240,3.88e-22,39;UBERON:0002020,1.65e-20,34;UBERON:0003528,1.15e-19,29;UBERON:0002791,1.15e-19,29;UBERON:0001893,1.15e-19,29;UBERON:0010314,3.57e-18,92;UBERON:0002021,5.25e-17,10;UBERON:0000411,5.25e-17,10;UBERON:0001950,5.25e-17,10;UBERON:0002420,2.68e-14,8;UBERON:0007245,2.68e-14,8;UBERON:0010009,2.68e-14,8;UBERON:0010011,2.68e-14,8;UBERON:0000454,2.68e-14,8;UBERON:0002950,4.34e-11,4;UBERON:0001891,4.34e-11,4;UBERON:0009616,4.34e-11,4;UBERON:0010286,4.34e-11,4;UBERON:0002619,2.50e-09,17;UBERON:0000025,2.80e-09,114;UBERON:0000956,4.98e-09,21;UBERON:0001869,4.98e-09,21;UBERON:0000203,4.98e-09,21;UBERON:0004684,7.05e-09,3;UBERON:0002275,7.05e-09,3;UBERON:0002038,1.25e-08,3;UBERON:0009663,1.25e-08,3;UBERON:0009661,1.25e-08,3;UBERON:0000125,1.25e-08,3;UBERON:0002308,1.25e-08,3;UBERON:0004111,2.87e-08,122;UBERON:0000369,1.33e-07,5;UBERON:0002435,1.33e-07,5;UBERON:0000204,1.33e-07,5;UBERON:0010082,1.33e-07,5;UBERON:0011216,2.64e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,0,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0,0.210324961351382,1.71390590642282,0.441737081903227,0.244981598429908,0.0958454710182364,0,13.2139057199266,6.63974158042976,7.37311359629969,2.2420668914133,1.46380229763855,0,6.97957497503452,5.6276261003168,6.1119299110724,0.294628585473668,1.13897344639282,0.372798891650601,0.075726193333184,0.604572480854284,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0.461230994512117,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,8.23848516726525,2.74500361691176,1.38219787324151,2.08589184230732,1.02286182932132,7.48036960414416,2.75810147215188,0.101839363850316,0,0,0.841767423545896,0.260240885925407,0.229902104433473,0.360124259610698,0.452114453507145,1.36072998302656,0.384341160854549,1.12442069471675,1.29351685369508,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.841159794256509,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0,0.172684981865896,0,0,0,0,0,5.29816946959713,2.93029216480508,0,0,1.26203287766503,0.390438744296638,0.430846795465598,0.477937595905104,0.668396022247182,0,0.809621403349789,0.292255857911312,0.790575555893047,3.85585579706168,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,4.08527526904546,0.18006109403131,0.129358683782755,0.643011105094777,0,0,0.987294123612726,1.2178597964584,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,5.7481843623258,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0.469428954583016,0,0,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,1.12950368523413,2.30162618253588,1.14579102687879,1.03111909406213,0.685082519770642,1.5107877947794,2.70009000092722,3.15224842256954,3.62513927187364,2.07104124700728,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0.64183841918363,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0.365855945745545,0,0,1.12228454331548,0,0.0985044823755635,0,0,0,0.499621155875892,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p6@Tox2 | |||
}} |
Revision as of 22:45, 13 September 2013
Short description: | p6@Tox2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tox2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -110bp_to_ENSMUST00000128999_5end |
EntrezGene: | Tox2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.49e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.49e-13 | 23 |
neuron | 1.17e-09 | 33 |
neuronal stem cell | 1.17e-09 | 33 |
neuroblast | 1.17e-09 | 33 |
electrically signaling cell | 1.17e-09 | 33 |
raphe nuclei neuron | 7.05e-09 | 3 |
neuron of the substantia nigra | 1.25e-08 | 3 |
electrically responsive cell | 9.75e-08 | 39 |
electrically active cell | 9.75e-08 | 39 |
neural cell | 9.24e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.