FFCP PHASE1:Mm9::chr2:25947538..25947553,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67991|HGNC=|MCL_coexpression_id=283|UniProt=Q9DCM7|association_with_transcript=143bp_to_ENSMUST00000114159_5end|description=CAGE_peak_6_at_Nacc2_5end|id=chr2:25947538..25947553,-|ontology_enrichment_celltype=CL:0000055!3.03e-16!50;CL:0000221!5.82e-16!44;CL:0000133!5.82e-16!44;CL:0002319!2.40e-15!43;CL:0000393!9.83e-11!39;CL:0000211!9.83e-11!39;CL:0002321!8.20e-10!70;CL:0000220!8.20e-10!70;CL:0000540!3.42e-09!33;CL:0000047!3.42e-09!33;CL:0000031!3.42e-09!33;CL:0000404!3.42e-09!33;CL:0000117!8.66e-09!23;CL:0000337!8.66e-09!23;CL:0000333!5.37e-08!10;CL:0000095!5.37e-08!10;CL:0000243!5.37e-08!10;CL:0000123!5.37e-08!10;CL:0000125!5.37e-08!10;CL:0000030!5.37e-08!10;CL:0000339!5.37e-08!10;CL:0002453!3.46e-07!8|ontology_enrichment_celltype_v019_2=CL:0000221,6.65e-17,44;CL:0000133,6.65e-17,44;CL:0002319,8.37e-16,43;CL:0002321,2.50e-12,70;CL:0002453,8.67e-12,8;CL:0000333,2.45e-11,10;CL:0000095,2.45e-11,10;CL:0000243,2.45e-11,10;CL:0000123,2.45e-11,10;CL:0000125,2.45e-11,10;CL:0000030,2.45e-11,10;CL:0000339,2.45e-11,10;CL:0000393,2.86e-09,39;CL:0000211,2.86e-09,39;CL:0000128,2.33e-08,6;CL:0000126,2.33e-08,6;CL:0000127,2.33e-08,6;CL:0000117,3.26e-08,23;CL:0000337,3.26e-08,23;CL:0000540,8.64e-08,33;CL:0000047,8.64e-08,33;CL:0000031,8.64e-08,33;CL:0000404,8.64e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.21e-29!75;UBERON:0001016!2.21e-29!75;UBERON:0001017!2.99e-28!73;UBERON:0005743!2.99e-28!73;UBERON:0001049!1.36e-21!52;UBERON:0005068!1.36e-21!52;UBERON:0006241!1.36e-21!52;UBERON:0007135!1.36e-21!52;UBERON:0000955!5.59e-21!50;UBERON:0006238!5.59e-21!50;UBERON:0002616!3.20e-20!49;UBERON:0004121!2.42e-19!102;UBERON:0000924!2.42e-19!102;UBERON:0006601!2.42e-19!102;UBERON:0000033!3.24e-19!63;UBERON:0002020!1.20e-16!34;UBERON:0002346!1.38e-15!71;UBERON:0003075!1.38e-15!71;UBERON:0007284!1.38e-15!71;UBERON:0003080!3.97e-14!40;UBERON:0002791!5.65e-14!29;UBERON:0003528!5.65e-14!29;UBERON:0001893!5.65e-14!29;UBERON:0002780!1.68e-13!39;UBERON:0001890!1.68e-13!39;UBERON:0006240!1.68e-13!39;UBERON:0003056!5.86e-13!49;UBERON:0000956!3.21e-10!21;UBERON:0001869!3.21e-10!21;UBERON:0000203!3.21e-10!21;UBERON:0007811!1.62e-09!86;UBERON:0002619!6.58e-09!17;UBERON:0000153!1.21e-08!94;UBERON:0003076!1.71e-08!12;UBERON:0003057!1.71e-08!12;UBERON:0004111!5.07e-07!122;UBERON:0002021!8.78e-07!10;UBERON:0000411!8.78e-07!10;UBERON:0001950!8.78e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.51e-39,75;UBERON:0001017,1.35e-38,73;UBERON:0000073,9.46e-31,54;UBERON:0004121,4.70e-30,95;UBERON:0000924,4.70e-30,95;UBERON:0006601,4.70e-30,95;UBERON:0001049,7.54e-28,52;UBERON:0005068,7.54e-28,52;UBERON:0006241,7.54e-28,52;UBERON:0007135,7.54e-28,52;UBERON:0000955,2.43e-23,47;UBERON:0006238,2.43e-23,47;UBERON:0002616,5.99e-22,46;UBERON:0002346,6.21e-21,64;UBERON:0003075,6.21e-21,64;UBERON:0007284,6.21e-21,64;UBERON:0010371,5.83e-20,73;UBERON:0002020,6.02e-20,34;UBERON:0003080,3.65e-16,40;UBERON:0003528,9.23e-16,29;UBERON:0002791,9.23e-16,29;UBERON:0001893,9.23e-16,29;UBERON:0002780,5.14e-15,39;UBERON:0001890,5.14e-15,39;UBERON:0006240,5.14e-15,39;UBERON:0010314,6.27e-14,92;UBERON:0000956,1.05e-13,21;UBERON:0001869,1.05e-13,21;UBERON:0000203,1.05e-13,21;UBERON:0002021,1.81e-13,10;UBERON:0000411,1.81e-13,10;UBERON:0001950,1.81e-13,10;UBERON:0003076,2.34e-13,12;UBERON:0003057,2.34e-13,12;UBERON:0002619,3.28e-13,17;UBERON:0003056,4.49e-12,49;UBERON:0004111,1.79e-11,122;UBERON:0000025,2.32e-10,114;UBERON:0011216,2.86e-10,194;UBERON:0004733,1.21e-07,6;UBERON:0004732,1.21e-07,6;UBERON:0002028,1.21e-07,6;UBERON:0007277,1.21e-07,6;UBERON:0002950,1.70e-07,4;UBERON:0001891,1.70e-07,4;UBERON:0009616,1.70e-07,4;UBERON:0010286,1.70e-07,4;UBERON:0002240,3.12e-07,6;UBERON:0005174,3.12e-07,6;UBERON:0001137,3.12e-07,6|phase1_expression=1.60148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,2.02753862439029,2.38610777810186,0.782391344348039,18.532138292338,9.88587822305123,8.94377535741704,7.41928034614421,23.0004102983955,0,0,0,0.514518872071894,0.573066879877513,0,0.202316460859598,1.5869729378161,0,1.0165335962074,0,0.899899717281399,0.988866362566974,0,12.8828047522914,15.3687322128622,0.725827286159344,1.08004750665353,0.210324961351382,3.99911378165325,4.41737081903227,0.61245399607477,0.958454710182364,0,6.60695285996332,9.06580100404833,9.83081812839958,0.923204014111357,0.457438218012048,0.52091337055676,9.49222196604695,2.8138130501584,4.5839474333043,2.65165726926301,2.13557521198654,0.372798891650601,1.28734528666413,0.982430281388212,0,0,0,0,0,0,0.140444420131752,1.36344258062446,0.779358013808606,0.35333957451034,3.09855523508697,0,0,7.11066703153331,0.432982082022428,0.253359865475099,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,2.34224637609238,3.56059401582874,0,0,0,0,3.74476598512057,3.20250421973039,0.502617408451458,3.99795936442236,1.53429274398198,7.48036960414416,5.02947915510049,0,0,0.252722758433675,0.841767423545896,0,0.229902104433473,0,0.30140963567143,0,0.512454881139399,0.187403449119458,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,3.78521907415429,0.823236899034275,0,0,0.426576501070468,0.928946687441754,0.38660238396628,0.403367049246685,0.444756087689741,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0,0,0.407302655690628,0,0.0701358198903186,0.379419222745544,0.295220295959204,0.156998727841375,0,0,0,0,0.224862112384854,0.405720242777006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651859905768103,0.169745085775188,0.704070744865506,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,12.0412942490844,6.91548950893999,1.96721934452011,0,0.631016438832513,0,0.430846795465598,0,0.668396022247182,1.41538265394416,0.404810701674894,0,1.18586333383957,8.67567554338879,0,0.534196811001766,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.775284879504663,0.727067458955011,0,0.316036757935816,0,0,2.04263763452273,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.608929898229199,0.23467170806371,0,0.220528398054962,0,0,0.180938774784468,0.119372344003136,0,0.291480836629851,16.3174265769249,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0.324016022465404,0.418176592028937,0.218362563746178,0.674321731924103,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,1.15913756419314,0,0.183151624267265,0.214368379079066,0.501572104035363,1.12950368523413,3.68260189205742,2.29158205375759,1.71853182343688,1.37016503954128,2.2661816921691,1.35004500046361,2.2516060161211,2.26571204492102,3.62432218226274,0.31136204275253,0,0.512200817262403,0,0.209613162627982,0,0,0.618105171716683,0.320919209591815,0,0.50695859978048,0,0.280924522409647,0.320125762024346,0.229741875822453,0,0.463537303779422,0,0,0.294397840268795,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0.57386499620653,0.220591419119515,0.463735671240843|short_description=p6@Nacc2}} | ||
|EntrezGene=67991 | |||
|HGNC= | |||
|MCL_coexpression_id=283 | |||
|UniProt=Q9DCM7 | |||
|association_with_transcript=143bp_to_ENSMUST00000114159_5end | |||
|description=CAGE_peak_6_at_Nacc2_5end | |||
|id=chr2:25947538..25947553,- | |||
|ontology_enrichment_celltype=CL:0000055!3.03e-16!50;CL:0000221!5.82e-16!44;CL:0000133!5.82e-16!44;CL:0002319!2.40e-15!43;CL:0000393!9.83e-11!39;CL:0000211!9.83e-11!39;CL:0002321!8.20e-10!70;CL:0000220!8.20e-10!70;CL:0000540!3.42e-09!33;CL:0000047!3.42e-09!33;CL:0000031!3.42e-09!33;CL:0000404!3.42e-09!33;CL:0000117!8.66e-09!23;CL:0000337!8.66e-09!23;CL:0000333!5.37e-08!10;CL:0000095!5.37e-08!10;CL:0000243!5.37e-08!10;CL:0000123!5.37e-08!10;CL:0000125!5.37e-08!10;CL:0000030!5.37e-08!10;CL:0000339!5.37e-08!10;CL:0002453!3.46e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.65e-17,44;CL:0000133,6.65e-17,44;CL:0002319,8.37e-16,43;CL:0002321,2.50e-12,70;CL:0002453,8.67e-12,8;CL:0000333,2.45e-11,10;CL:0000095,2.45e-11,10;CL:0000243,2.45e-11,10;CL:0000123,2.45e-11,10;CL:0000125,2.45e-11,10;CL:0000030,2.45e-11,10;CL:0000339,2.45e-11,10;CL:0000393,2.86e-09,39;CL:0000211,2.86e-09,39;CL:0000128,2.33e-08,6;CL:0000126,2.33e-08,6;CL:0000127,2.33e-08,6;CL:0000117,3.26e-08,23;CL:0000337,3.26e-08,23;CL:0000540,8.64e-08,33;CL:0000047,8.64e-08,33;CL:0000031,8.64e-08,33;CL:0000404,8.64e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.21e-29!75;UBERON:0001016!2.21e-29!75;UBERON:0001017!2.99e-28!73;UBERON:0005743!2.99e-28!73;UBERON:0001049!1.36e-21!52;UBERON:0005068!1.36e-21!52;UBERON:0006241!1.36e-21!52;UBERON:0007135!1.36e-21!52;UBERON:0000955!5.59e-21!50;UBERON:0006238!5.59e-21!50;UBERON:0002616!3.20e-20!49;UBERON:0004121!2.42e-19!102;UBERON:0000924!2.42e-19!102;UBERON:0006601!2.42e-19!102;UBERON:0000033!3.24e-19!63;UBERON:0002020!1.20e-16!34;UBERON:0002346!1.38e-15!71;UBERON:0003075!1.38e-15!71;UBERON:0007284!1.38e-15!71;UBERON:0003080!3.97e-14!40;UBERON:0002791!5.65e-14!29;UBERON:0003528!5.65e-14!29;UBERON:0001893!5.65e-14!29;UBERON:0002780!1.68e-13!39;UBERON:0001890!1.68e-13!39;UBERON:0006240!1.68e-13!39;UBERON:0003056!5.86e-13!49;UBERON:0000956!3.21e-10!21;UBERON:0001869!3.21e-10!21;UBERON:0000203!3.21e-10!21;UBERON:0007811!1.62e-09!86;UBERON:0002619!6.58e-09!17;UBERON:0000153!1.21e-08!94;UBERON:0003076!1.71e-08!12;UBERON:0003057!1.71e-08!12;UBERON:0004111!5.07e-07!122;UBERON:0002021!8.78e-07!10;UBERON:0000411!8.78e-07!10;UBERON:0001950!8.78e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.51e-39,75;UBERON:0001017,1.35e-38,73;UBERON:0000073,9.46e-31,54;UBERON:0004121,4.70e-30,95;UBERON:0000924,4.70e-30,95;UBERON:0006601,4.70e-30,95;UBERON:0001049,7.54e-28,52;UBERON:0005068,7.54e-28,52;UBERON:0006241,7.54e-28,52;UBERON:0007135,7.54e-28,52;UBERON:0000955,2.43e-23,47;UBERON:0006238,2.43e-23,47;UBERON:0002616,5.99e-22,46;UBERON:0002346,6.21e-21,64;UBERON:0003075,6.21e-21,64;UBERON:0007284,6.21e-21,64;UBERON:0010371,5.83e-20,73;UBERON:0002020,6.02e-20,34;UBERON:0003080,3.65e-16,40;UBERON:0003528,9.23e-16,29;UBERON:0002791,9.23e-16,29;UBERON:0001893,9.23e-16,29;UBERON:0002780,5.14e-15,39;UBERON:0001890,5.14e-15,39;UBERON:0006240,5.14e-15,39;UBERON:0010314,6.27e-14,92;UBERON:0000956,1.05e-13,21;UBERON:0001869,1.05e-13,21;UBERON:0000203,1.05e-13,21;UBERON:0002021,1.81e-13,10;UBERON:0000411,1.81e-13,10;UBERON:0001950,1.81e-13,10;UBERON:0003076,2.34e-13,12;UBERON:0003057,2.34e-13,12;UBERON:0002619,3.28e-13,17;UBERON:0003056,4.49e-12,49;UBERON:0004111,1.79e-11,122;UBERON:0000025,2.32e-10,114;UBERON:0011216,2.86e-10,194;UBERON:0004733,1.21e-07,6;UBERON:0004732,1.21e-07,6;UBERON:0002028,1.21e-07,6;UBERON:0007277,1.21e-07,6;UBERON:0002950,1.70e-07,4;UBERON:0001891,1.70e-07,4;UBERON:0009616,1.70e-07,4;UBERON:0010286,1.70e-07,4;UBERON:0002240,3.12e-07,6;UBERON:0005174,3.12e-07,6;UBERON:0001137,3.12e-07,6 | |||
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|short_description=p6@Nacc2 | |||
}} |
Revision as of 23:30, 13 September 2013
Short description: | p6@Nacc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Nacc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | 143bp_to_ENSMUST00000114159_5end |
EntrezGene: | Nacc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.65e-17 | 44 |
neurectodermal cell | 6.65e-17 | 44 |
neural cell | 8.37e-16 | 43 |
embryonic cell | 2.50e-12 | 70 |
oligodendrocyte precursor cell | 8.67e-12 | 8 |
migratory neural crest cell | 2.45e-11 | 10 |
neuron associated cell | 2.45e-11 | 10 |
glial cell (sensu Vertebrata) | 2.45e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 2.45e-11 | 10 |
glial cell | 2.45e-11 | 10 |
glioblast | 2.45e-11 | 10 |
glioblast (sensu Vertebrata) | 2.45e-11 | 10 |
electrically responsive cell | 2.86e-09 | 39 |
electrically active cell | 2.86e-09 | 39 |
oligodendrocyte | 2.33e-08 | 6 |
macroglial cell | 2.33e-08 | 6 |
astrocyte | 2.33e-08 | 6 |
CNS neuron (sensu Vertebrata) | 3.26e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.26e-08 | 23 |
neuron | 8.64e-08 | 33 |
neuronal stem cell | 8.64e-08 | 33 |
neuroblast | 8.64e-08 | 33 |
electrically signaling cell | 8.64e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.