FFCP PHASE1:Hg19::chr8:24151592..24151611,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10863|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=206|TSSclassifier=S|UniProt=E7EMU1,E5RGY1,E5RJQ1,B4DDY3|association_with_transcript=10bp_to_ENST00000397649,ENST00000520448,ENST00000523379,ENST00000540823_5end|coexpression_cluster_id=C4745|description=CAGE_peak_2_at_ADAM28_5end|id=chr8:24151592..24151611,+|ontology_enrichment_celltype=CL:0000738!7.78e-21!140;CL:0000037!1.28e-20!172;CL:0000566!1.28e-20!172;CL:0002057!3.00e-20!42;CL:0002009!3.88e-19!65;CL:0000763!1.56e-18!112;CL:0000049!1.56e-18!112;CL:0002032!1.72e-18!165;CL:0000837!1.72e-18!165;CL:0002194!8.87e-18!63;CL:0000576!8.87e-18!63;CL:0000040!8.87e-18!63;CL:0000559!8.87e-18!63;CL:0000860!9.51e-18!45;CL:0000766!9.83e-18!76;CL:0000988!2.05e-17!182;CL:0002087!3.87e-17!119;CL:0000557!6.83e-17!71;CL:0000839!1.24e-14!70;CL:0002031!2.17e-14!124;CL:0000236!5.55e-11!14|ontology_enrichment_celltype_v019=CL:0000860;3.33e-21;33!CL:0002057;3.33e-21;33!CL:0000473;4.07e-21;39!CL:0000234;4.07e-21;39!CL:0000576;1.24e-14;48!CL:0000236;5.03e-13;13!CL:0000766;9.89e-11;69!CL:0000945;3.86e-08;24!CL:0000738;2.66e-07;136!CL:0000763;2.95e-07;100!CL:0002087;4.90e-07;104|ontology_enrichment_celltype_v019_2=CL:0000473,8.03e-27,48;CL:0000234,8.03e-27,48;CL:0000738,2.73e-26,136;CL:0000037,2.28e-24,168;CL:0002009,1.38e-23,61;CL:0000860,1.49e-22,42;CL:0002057,1.49e-22,42;CL:0000766,1.58e-22,72;CL:0002194,7.73e-22,59;CL:0000576,7.73e-22,59;CL:0000040,7.73e-22,59;CL:0000559,7.73e-22,59;CL:0000988,1.31e-21,177;CL:0002032,1.31e-21,161;CL:0000837,1.31e-21,161;CL:0000763,1.41e-21,108;CL:0000049,1.41e-21,108;CL:0000557,2.47e-21,67;CL:0002087,8.48e-21,115;CL:0000839,7.08e-18,66;CL:0002031,2.01e-17,120;CL:0000236,8.61e-14,14;CL:0000945,4.09e-08,24;CL:0000826,4.09e-08,24|ontology_enrichment_development_v019=CL:0002057;7.40e-17;42!CL:0000049;8.90e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.21e-42!115;UBERON:0002390!3.22e-18!102;UBERON:0003061!3.22e-18!102;UBERON:0001049!1.20e-17!57;UBERON:0005068!1.20e-17!57;UBERON:0006241!1.20e-17!57;UBERON:0007135!1.20e-17!57;UBERON:0002193!1.48e-16!112;UBERON:0003080!1.14e-14!42;UBERON:0002780!1.67e-14!41;UBERON:0001890!1.67e-14!41;UBERON:0006240!1.67e-14!41;UBERON:0002616!9.23e-14!59;UBERON:0002371!1.27e-13!80;UBERON:0001017!6.32e-12!82;UBERON:0003075!1.02e-11!86;UBERON:0007284!1.02e-11!86;UBERON:0005743!1.25e-11!86;UBERON:0001474!2.52e-11!86;UBERON:0000955!7.10e-11!69;UBERON:0006238!7.10e-11!69;UBERON:0002020!9.68e-11!34;UBERON:0003528!9.68e-11!34;UBERON:0001893!1.29e-10!34;UBERON:0002346!2.29e-10!90;UBERON:0002791!2.94e-10!33;UBERON:0002405!7.64e-10!115;UBERON:0001869!1.98e-09!32;UBERON:0003056!1.99e-09!61;UBERON:0000073!2.49e-09!94;UBERON:0001016!2.49e-09!94;UBERON:0004765!6.96e-09!101;UBERON:0001434!6.96e-09!101;UBERON:0002619!4.83e-08!22;UBERON:0000153!1.77e-07!129;UBERON:0007811!1.77e-07!129;UBERON:0000033!3.79e-07!123;UBERON:0001950!6.50e-07!20|ontology_enrichment_uberon_v019=UBERON:0002780;6.80e-12;41!UBERON:0001890;6.80e-12;41!UBERON:0000073;3.73e-10;53!UBERON:0002616;3.73e-10;53!UBERON:0003528;8.61e-10;34!UBERON:0002020;8.61e-10;34!UBERON:0001893;8.62e-10;34!UBERON:0002791;3.49e-09;32!UBERON:0007023;3.85e-09;114!UBERON:0001869;6.01e-09;32!UBERON:0002420;7.66e-08;9!UBERON:0000125;7.66e-08;9!UBERON:0007245;7.66e-08;9!UBERON:0002308;7.66e-08;9!UBERON:0010009;7.66e-08;9!UBERON:0010011;7.66e-08;9!UBERON:0000454;7.66e-08;9!UBERON:0002619;8.32e-08;22!UBERON:0000178;1.41e-07;15!UBERON:0000179;1.41e-07;15!UBERON:0000463;1.41e-07;15!UBERON:0001894;5.26e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.40e-37,114;UBERON:0002390,7.40e-24,98;UBERON:0003061,7.40e-24,98;UBERON:0002193,8.58e-22,108;UBERON:0001049,5.01e-19,56;UBERON:0005068,5.01e-19,56;UBERON:0006241,5.01e-19,56;UBERON:0007135,5.01e-19,56;UBERON:0002371,6.13e-18,76;UBERON:0000073,5.26e-17,53;UBERON:0002616,5.26e-17,53;UBERON:0002780,2.74e-16,41;UBERON:0001890,2.74e-16,41;UBERON:0003080,2.74e-16,41;UBERON:0006240,2.74e-16,41;UBERON:0002405,6.11e-16,93;UBERON:0001474,1.95e-15,82;UBERON:0004765,1.70e-14,90;UBERON:0001434,3.61e-12,100;UBERON:0003528,1.20e-11,34;UBERON:0002020,1.20e-11,34;UBERON:0000955,1.28e-11,68;UBERON:0006238,1.28e-11,68;UBERON:0001893,1.69e-11,34;UBERON:0001017,1.83e-11,81;UBERON:0003075,1.53e-10,82;UBERON:0007284,1.53e-10,82;UBERON:0002791,2.49e-10,32;UBERON:0001869,4.65e-10,32;UBERON:0001016,1.50e-09,89;UBERON:0002346,1.84e-09,86;UBERON:0003056,6.50e-09,61;UBERON:0002420,5.89e-08,9;UBERON:0007245,5.89e-08,9;UBERON:0010009,5.89e-08,9;UBERON:0010011,5.89e-08,9;UBERON:0000454,5.89e-08,9;UBERON:0000125,6.17e-08,9;UBERON:0002308,6.17e-08,9;UBERON:0002619,8.90e-08,22;UBERON:0000178,1.37e-07,15;UBERON:0000179,1.37e-07,15;UBERON:0000463,1.37e-07,15;UBERON:0001894,5.98e-07,7;UBERON:0006222,5.98e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=206 | |||
|TSSclassifier=S | |||
|UniProt=E7EMU1,E5RGY1,E5RJQ1,B4DDY3 | |||
|association_with_transcript=10bp_to_ENST00000397649,ENST00000520448,ENST00000523379,ENST00000540823_5end | |||
|coexpression_cluster_id=C4745 | |||
|description=CAGE_peak_2_at_ADAM28_5end | |||
|id=chr8:24151592..24151611,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.78e-21!140;CL:0000037!1.28e-20!172;CL:0000566!1.28e-20!172;CL:0002057!3.00e-20!42;CL:0002009!3.88e-19!65;CL:0000763!1.56e-18!112;CL:0000049!1.56e-18!112;CL:0002032!1.72e-18!165;CL:0000837!1.72e-18!165;CL:0002194!8.87e-18!63;CL:0000576!8.87e-18!63;CL:0000040!8.87e-18!63;CL:0000559!8.87e-18!63;CL:0000860!9.51e-18!45;CL:0000766!9.83e-18!76;CL:0000988!2.05e-17!182;CL:0002087!3.87e-17!119;CL:0000557!6.83e-17!71;CL:0000839!1.24e-14!70;CL:0002031!2.17e-14!124;CL:0000236!5.55e-11!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.33e-21;33!CL:0002057;3.33e-21;33!CL:0000473;4.07e-21;39!CL:0000234;4.07e-21;39!CL:0000576;1.24e-14;48!CL:0000236;5.03e-13;13!CL:0000766;9.89e-11;69!CL:0000945;3.86e-08;24!CL:0000738;2.66e-07;136!CL:0000763;2.95e-07;100!CL:0002087;4.90e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.03e-27,48;CL:0000234,8.03e-27,48;CL:0000738,2.73e-26,136;CL:0000037,2.28e-24,168;CL:0002009,1.38e-23,61;CL:0000860,1.49e-22,42;CL:0002057,1.49e-22,42;CL:0000766,1.58e-22,72;CL:0002194,7.73e-22,59;CL:0000576,7.73e-22,59;CL:0000040,7.73e-22,59;CL:0000559,7.73e-22,59;CL:0000988,1.31e-21,177;CL:0002032,1.31e-21,161;CL:0000837,1.31e-21,161;CL:0000763,1.41e-21,108;CL:0000049,1.41e-21,108;CL:0000557,2.47e-21,67;CL:0002087,8.48e-21,115;CL:0000839,7.08e-18,66;CL:0002031,2.01e-17,120;CL:0000236,8.61e-14,14;CL:0000945,4.09e-08,24;CL:0000826,4.09e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002057;7.40e-17;42!CL:0000049;8.90e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.21e-42!115;UBERON:0002390!3.22e-18!102;UBERON:0003061!3.22e-18!102;UBERON:0001049!1.20e-17!57;UBERON:0005068!1.20e-17!57;UBERON:0006241!1.20e-17!57;UBERON:0007135!1.20e-17!57;UBERON:0002193!1.48e-16!112;UBERON:0003080!1.14e-14!42;UBERON:0002780!1.67e-14!41;UBERON:0001890!1.67e-14!41;UBERON:0006240!1.67e-14!41;UBERON:0002616!9.23e-14!59;UBERON:0002371!1.27e-13!80;UBERON:0001017!6.32e-12!82;UBERON:0003075!1.02e-11!86;UBERON:0007284!1.02e-11!86;UBERON:0005743!1.25e-11!86;UBERON:0001474!2.52e-11!86;UBERON:0000955!7.10e-11!69;UBERON:0006238!7.10e-11!69;UBERON:0002020!9.68e-11!34;UBERON:0003528!9.68e-11!34;UBERON:0001893!1.29e-10!34;UBERON:0002346!2.29e-10!90;UBERON:0002791!2.94e-10!33;UBERON:0002405!7.64e-10!115;UBERON:0001869!1.98e-09!32;UBERON:0003056!1.99e-09!61;UBERON:0000073!2.49e-09!94;UBERON:0001016!2.49e-09!94;UBERON:0004765!6.96e-09!101;UBERON:0001434!6.96e-09!101;UBERON:0002619!4.83e-08!22;UBERON:0000153!1.77e-07!129;UBERON:0007811!1.77e-07!129;UBERON:0000033!3.79e-07!123;UBERON:0001950!6.50e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.80e-12;41!UBERON:0001890;6.80e-12;41!UBERON:0000073;3.73e-10;53!UBERON:0002616;3.73e-10;53!UBERON:0003528;8.61e-10;34!UBERON:0002020;8.61e-10;34!UBERON:0001893;8.62e-10;34!UBERON:0002791;3.49e-09;32!UBERON:0007023;3.85e-09;114!UBERON:0001869;6.01e-09;32!UBERON:0002420;7.66e-08;9!UBERON:0000125;7.66e-08;9!UBERON:0007245;7.66e-08;9!UBERON:0002308;7.66e-08;9!UBERON:0010009;7.66e-08;9!UBERON:0010011;7.66e-08;9!UBERON:0000454;7.66e-08;9!UBERON:0002619;8.32e-08;22!UBERON:0000178;1.41e-07;15!UBERON:0000179;1.41e-07;15!UBERON:0000463;1.41e-07;15!UBERON:0001894;5.26e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.40e-37,114;UBERON:0002390,7.40e-24,98;UBERON:0003061,7.40e-24,98;UBERON:0002193,8.58e-22,108;UBERON:0001049,5.01e-19,56;UBERON:0005068,5.01e-19,56;UBERON:0006241,5.01e-19,56;UBERON:0007135,5.01e-19,56;UBERON:0002371,6.13e-18,76;UBERON:0000073,5.26e-17,53;UBERON:0002616,5.26e-17,53;UBERON:0002780,2.74e-16,41;UBERON:0001890,2.74e-16,41;UBERON:0003080,2.74e-16,41;UBERON:0006240,2.74e-16,41;UBERON:0002405,6.11e-16,93;UBERON:0001474,1.95e-15,82;UBERON:0004765,1.70e-14,90;UBERON:0001434,3.61e-12,100;UBERON:0003528,1.20e-11,34;UBERON:0002020,1.20e-11,34;UBERON:0000955,1.28e-11,68;UBERON:0006238,1.28e-11,68;UBERON:0001893,1.69e-11,34;UBERON:0001017,1.83e-11,81;UBERON:0003075,1.53e-10,82;UBERON:0007284,1.53e-10,82;UBERON:0002791,2.49e-10,32;UBERON:0001869,4.65e-10,32;UBERON:0001016,1.50e-09,89;UBERON:0002346,1.84e-09,86;UBERON:0003056,6.50e-09,61;UBERON:0002420,5.89e-08,9;UBERON:0007245,5.89e-08,9;UBERON:0010009,5.89e-08,9;UBERON:0010011,5.89e-08,9;UBERON:0000454,5.89e-08,9;UBERON:0000125,6.17e-08,9;UBERON:0002308,6.17e-08,9;UBERON:0002619,8.90e-08,22;UBERON:0000178,1.37e-07,15;UBERON:0000179,1.37e-07,15;UBERON:0000463,1.37e-07,15;UBERON:0001894,5.98e-07,7;UBERON:0006222,5.98e-07,7 | |||
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| |||
|short_description=p2@ADAM28 | |||
}} |
Revision as of 04:44, 14 September 2013
Short description: | p2@ADAM28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ADAM28_5end |
Coexpression cluster: | C4745_CD19_CD14_stomach_immature_epididymis_spinal_smallcell |
Association with transcript: | 10bp_to_ENST00000397649, ENST00000520448, ENST00000523379, ENST00000540823_5end |
EntrezGene: | ADAM28 |
HGNC: | 206 |
UniProt: | E7EMU1E5RGY1E5RJQ1B4DDY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.03e-27 | 48 |
phagocyte | 8.03e-27 | 48 |
leukocyte | 2.73e-26 | 136 |
hematopoietic stem cell | 2.28e-24 | 168 |
macrophage dendritic cell progenitor | 1.38e-23 | 61 |
classical monocyte | 1.49e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.49e-22 | 42 |
myeloid leukocyte | 1.58e-22 | 72 |
monopoietic cell | 7.73e-22 | 59 |
monocyte | 7.73e-22 | 59 |
monoblast | 7.73e-22 | 59 |
promonocyte | 7.73e-22 | 59 |
hematopoietic cell | 1.31e-21 | 177 |
hematopoietic oligopotent progenitor cell | 1.31e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-21 | 161 |
myeloid cell | 1.41e-21 | 108 |
common myeloid progenitor | 1.41e-21 | 108 |
granulocyte monocyte progenitor cell | 2.47e-21 | 67 |
nongranular leukocyte | 8.48e-21 | 115 |
myeloid lineage restricted progenitor cell | 7.08e-18 | 66 |
hematopoietic lineage restricted progenitor cell | 2.01e-17 | 120 |
B cell | 8.61e-14 | 14 |
lymphocyte of B lineage | 4.09e-08 | 24 |
pro-B cell | 4.09e-08 | 24 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.